RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 VAMP3Q15836 100 aa11.49□□□□□ -0.57
DDX39A-215ENST00000590696 LINC00575Q6W349 94 aa11.48□□□□□ -0.57
DDX39A-215ENST00000590696 FLGP20930 4061 aaPredicted RBP11.48□□□□□ -0.57
DDX39A-215ENST00000590696 Q6ZQY7 126 aa11.45□□□□□ -0.58
DDX39A-215ENST00000590696 hADV29S1A0JD25 119 aa11.44□□□□□ -0.58
DDX39A-215ENST00000590696 SNRPEP62304 92 aaKnown RBP11.44□□□□□ -0.58
DDX39A-215ENST00000590696 Q6JHZ5 121 aa11.44□□□□□ -0.58
DDX39A-215ENST00000590696 IGFL1Q6UW32 110 aa11.43□□□□□ -0.58
DDX39A-215ENST00000590696 TRBV7-7A0A0K0K1E9 115 aa11.42□□□□□ -0.58
DDX39A-215ENST00000590696 CLEC2BQ92478 149 aa11.42□□□□□ -0.58
DDX39A-215ENST00000590696 OCIAD2Q56VL3 154 aa11.4□□□□□ -0.58
DDX39A-215ENST00000590696 OBSCN-AS1Q96MR7 158 aa11.38□□□□□ -0.59
DDX39A-215ENST00000590696 ATP11AUNQ6ZP68 121 aa11.36□□□□□ -0.59
DDX39A-215ENST00000590696 Q6Q795 121 aa11.34□□□□□ -0.59
DDX39A-215ENST00000590696 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.34□□□□□ -0.59
DDX39A-215ENST00000590696 Q75L30 129 aa11.34□□□□□ -0.59
DDX39A-215ENST00000590696 HSBP1L1C9JCN9 74 aa11.32□□□□□ -0.6
DDX39A-215ENST00000590696 SNHG12Q9BXW3 62 aa11.31□□□□□ -0.6
DDX39A-215ENST00000590696 LST1O00453 97 aa11.3□□□□□ -0.6
DDX39A-215ENST00000590696 PPDPFLQ8WWR9 84 aa11.3□□□□□ -0.6
DDX39A-215ENST00000590696 C12orf57Q99622 126 aa11.3□□□□□ -0.6
DDX39A-215ENST00000590696 BVES-AS1Q5T3Y7 98 aa11.29□□□□□ -0.6
DDX39A-215ENST00000590696 HIST3H2BBQ8N257 126 aa11.29□□□□□ -0.6
DDX39A-215ENST00000590696 HIST1H2BLQ99880 126 aa11.29□□□□□ -0.6
DDX39A-215ENST00000590696 H3BUT2 72 aa11.28□□□□□ -0.6
DDX39A-215ENST00000590696 S100A2P29034 98 aa11.27□□□□□ -0.61
DDX39A-215ENST00000590696 Q96NJ1 140 aa11.27□□□□□ -0.61
DDX39A-215ENST00000590696 SCGB1D1O95968 90 aa11.25□□□□□ -0.61
DDX39A-215ENST00000590696 HIST1H4GQ99525 98 aa11.24□□□□□ -0.61
DDX39A-215ENST00000590696 SS18L2Q9UHA2 77 aa11.2□□□□□ -0.62
DDX39A-215ENST00000590696 C20orf166-AS1Q96NR2 134 aa11.18□□□□□ -0.62
DDX39A-215ENST00000590696 TEN1Q86WV5 123 aa11.16□□□□□ -0.62
DDX39A-215ENST00000590696 A8MUU9 505 aa11.15□□□□□ -0.62
DDX39A-215ENST00000590696 SNCGO76070 127 aa11.14□□□□□ -0.63
DDX39A-215ENST00000590696 CFC1P0CG37 223 aa11.14□□□□□ -0.63
DDX39A-215ENST00000590696 COX8AP10176 69 aa11.14□□□□□ -0.63
DDX39A-215ENST00000590696 NDUFV3P56181 108 aaKnown RBP11.14□□□□□ -0.63
DDX39A-215ENST00000590696 RAB37Q96AX2 223 aa11.12□□□□□ -0.63
DDX39A-215ENST00000590696 A0A087WSZ3 146 aa11.11□□□□□ -0.63
DDX39A-215ENST00000590696 H0YGX0 51 aa11.11□□□□□ -0.63
DDX39A-215ENST00000590696 S100A6P06703 90 aa11.11□□□□□ -0.63
DDX39A-215ENST00000590696 FAM218AQ96MZ4 157 aa11.11□□□□□ -0.63
DDX39A-215ENST00000590696 TRBV20-1A0A075B6N2 111 aa11.1□□□□□ -0.63
DDX39A-215ENST00000590696 DLEU1O43261 78 aa11.09□□□□□ -0.63
DDX39A-215ENST00000590696 KRTAP9-8Q9BYQ0 159 aa11.09□□□□□ -0.63
DDX39A-215ENST00000590696 DSCR10P59022 87 aa11.07□□□□□ -0.64
DDX39A-215ENST00000590696 H3BMG7 143 aa11.06□□□□□ -0.64
DDX39A-215ENST00000590696 A0A0B4J2C4 111 aa11.05□□□□□ -0.64
DDX39A-215ENST00000590696 C14orf144Q96I85 54 aa11.04□□□□□ -0.64
DDX39A-215ENST00000590696 FABP2P12104 132 aa11.02□□□□□ -0.65
DDX39A-215ENST00000590696 HIGD1BQ9P298 99 aa11.02□□□□□ -0.65
DDX39A-215ENST00000590696 USH2AO75445 5202 aa11.02□□□□□ -0.65
DDX39A-215ENST00000590696 A0A1B0GX51 115 aa11□□□□□ -0.65
DDX39A-215ENST00000590696 GHRHP01286 108 aa11□□□□□ -0.65
DDX39A-215ENST00000590696 SIGMAR1Q99720 223 aa11□□□□□ -0.65
DDX39A-215ENST00000590696 A0A1W2PNM2 257 aa10.99□□□□□ -0.65
DDX39A-215ENST00000590696 SSPOA2VEC9 5147 aa10.98□□□□□ -0.65
DDX39A-215ENST00000590696 KRTAP16-1A8MUX0 517 aa10.98□□□□□ -0.65
DDX39A-215ENST00000590696 LINC00313P59037 77 aa10.97□□□□□ -0.65
DDX39A-215ENST00000590696 SPATA45Q537H7 98 aa10.96□□□□□ -0.65
DDX39A-215ENST00000590696 C2orf91Q6ZV80 131 aa10.96□□□□□ -0.65
DDX39A-215ENST00000590696 PAM16Q9Y3D7 125 aa10.96□□□□□ -0.65
DDX39A-215ENST00000590696 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.95□□□□□ -0.66
DDX39A-215ENST00000590696 PRO1854Q9UHT4 67 aa10.95□□□□□ -0.66
DDX39A-215ENST00000590696 FAM236DA0A1B0GTK5 79 aa10.94□□□□□ -0.66
DDX39A-215ENST00000590696 IGKV4-1P06312 121 aa10.94□□□□□ -0.66
DDX39A-215ENST00000590696 FAM236CP0DP71 79 aa10.94□□□□□ -0.66
DDX39A-215ENST00000590696 CEND1Q8N111 149 aa10.94□□□□□ -0.66
DDX39A-215ENST00000590696 ANKRD29Q8N6D5 301 aa10.91□□□□□ -0.66
DDX39A-215ENST00000590696 TMEM238LA0A1B0GVL6 79 aa10.9□□□□□ -0.66
DDX39A-215ENST00000590696 A6NJY4 79 aa10.9□□□□□ -0.66
DDX39A-215ENST00000590696 KRTAP9-7A8MTY7 169 aa10.9□□□□□ -0.66
DDX39A-215ENST00000590696 TRIAP1O43715 76 aa10.9□□□□□ -0.66
DDX39A-215ENST00000590696 MT2AP02795 61 aa10.9□□□□□ -0.66
DDX39A-215ENST00000590696 S100A1P23297 94 aa10.9□□□□□ -0.66
DDX39A-215ENST00000590696 TRBV7-4A0A0J9YYF1 115 aa10.89□□□□□ -0.67
DDX39A-215ENST00000590696 A0A1B0GV72 72 aa10.88□□□□□ -0.67
DDX39A-215ENST00000590696 NOTCH2NLQ7Z3S9 236 aa10.88□□□□□ -0.67
DDX39A-215ENST00000590696 VAMP8Q9BV40 100 aa10.88□□□□□ -0.67
DDX39A-215ENST00000590696 FXYD2P54710 66 aa10.87□□□□□ -0.67
DDX39A-215ENST00000590696 DEFB116Q30KQ4 102 aa10.87□□□□□ -0.67
DDX39A-215ENST00000590696 HRES1P13985 223 aa10.86□□□□□ -0.67
DDX39A-215ENST00000590696 RBM12B-AS1Q9P1G2 102 aa10.86□□□□□ -0.67
DDX39A-215ENST00000590696 DNAL4O96015 105 aa10.85□□□□□ -0.67
DDX39A-215ENST00000590696 MPLKIPQ8TAP9 179 aa10.85□□□□□ -0.67
DDX39A-215ENST00000590696 ORMDL1Q9P0S3 153 aa10.85□□□□□ -0.67
DDX39A-215ENST00000590696 LINC00472Q9H8W2 130 aa10.83□□□□□ -0.68
DDX39A-215ENST00000590696 IGHV6-1A0A0B4J1U7 121 aa10.81□□□□□ -0.68
DDX39A-215ENST00000590696 H3BQ85 93 aa10.81□□□□□ -0.68
DDX39A-215ENST00000590696 MT1FP04733 61 aa10.81□□□□□ -0.68
DDX39A-215ENST00000590696 CCKP06307 115 aa10.8□□□□□ -0.68
DDX39A-215ENST00000590696 TMEM256-PLSCR3K7ERE1 68 aa10.79□□□□□ -0.68
DDX39A-215ENST00000590696 TRACP01848 142 aa10.79□□□□□ -0.68
DDX39A-215ENST00000590696 LCE2BO14633 110 aa10.78□□□□□ -0.68
DDX39A-215ENST00000590696 PSMB2P49721 201 aa10.78□□□□□ -0.68
DDX39A-215ENST00000590696 KRTAP10-10P60014 251 aa10.76□□□□□ -0.69
DDX39A-215ENST00000590696 FCGBPQ9Y6R7 5405 aaPredicted RBP10.76□□□□□ -0.69
DDX39A-215ENST00000590696 KRTAP9-3Q9BYQ3 159 aa10.75□□□□□ -0.69
DDX39A-215ENST00000590696 K7ERJ3 54 aa10.73□□□□□ -0.69
DDX39A-215ENST00000590696 COX6CP09669 75 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms