RNA–Protein interactions for RNA: ENST00000589857.1

ZNF540-208, Transcript of zinc finger protein 540, humanhuman

TSL 4

Gene ZNF540, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-208ENST00000589857 BPY2O14599 106 aa6.74□□□□□ -1.33
ZNF540-208ENST00000589857 TMEM258P61165 79 aa6.74□□□□□ -1.33
ZNF540-208ENST00000589857 TNP2Q05952 138 aa6.74□□□□□ -1.33
ZNF540-208ENST00000589857 KRTAP7-1Q8IUC3 87 aa6.74□□□□□ -1.33
ZNF540-208ENST00000589857 Q8NBF4 154 aa6.74□□□□□ -1.33
ZNF540-208ENST00000589857 IGKV2-24A0A0C4DH68 120 aa6.73□□□□□ -1.33
ZNF540-208ENST00000589857 C9orf163Q8N9P6 203 aa6.73□□□□□ -1.33
ZNF540-208ENST00000589857 A0A1B0GVY2 172 aa6.72□□□□□ -1.33
ZNF540-208ENST00000589857 SPRR4Q96PI1 79 aa6.71□□□□□ -1.34
ZNF540-208ENST00000589857 IGLV8-61A0A075B6I0 122 aa6.7□□□□□ -1.34
ZNF540-208ENST00000589857 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-208ENST00000589857 A0A1W2PNN7 141 aa6.69□□□□□ -1.34
ZNF540-208ENST00000589857 LRCOL1A6NCL2 159 aa6.69□□□□□ -1.34
ZNF540-208ENST00000589857 ERC2-IT1O76042 136 aa6.69□□□□□ -1.34
ZNF540-208ENST00000589857 LORP23490 312 aaPredicted RBP6.69□□□□□ -1.34
ZNF540-208ENST00000589857 ST20-AS1Q8NBB2 130 aa6.69□□□□□ -1.34
ZNF540-208ENST00000589857 DNAH10Q8IVF4 4471 aa6.69□□□□□ -1.34
ZNF540-208ENST00000589857 NDUFC1O43677 76 aa6.68□□□□□ -1.34
ZNF540-208ENST00000589857 CDK2AP2O75956 126 aa6.68□□□□□ -1.34
ZNF540-208ENST00000589857 UBE2AP49459 152 aa6.68□□□□□ -1.34
ZNF540-208ENST00000589857 A0A1W2PNM2 257 aa6.67□□□□□ -1.34
ZNF540-208ENST00000589857 RTL8CO15255 209 aa6.67□□□□□ -1.34
ZNF540-208ENST00000589857 SPRR1BP22528 89 aa6.67□□□□□ -1.34
ZNF540-208ENST00000589857 C1orf134Q5TEV5 83 aa6.67□□□□□ -1.34
ZNF540-208ENST00000589857 SCXQ7RTU7 201 aa6.67□□□□□ -1.34
ZNF540-208ENST00000589857 HIGD2AQ9BW72 106 aa6.67□□□□□ -1.34
ZNF540-208ENST00000589857 J3KT08 172 aa6.66□□□□□ -1.34
ZNF540-208ENST00000589857 IGKV4-1P06312 121 aa6.66□□□□□ -1.34
ZNF540-208ENST00000589857 Q6ZRN7 208 aaPredicted RBP6.66□□□□□ -1.34
ZNF540-208ENST00000589857 RPS28P62857 69 aaKnown RBP6.65□□□□□ -1.34
ZNF540-208ENST00000589857 PRLHP81277 87 aa6.65□□□□□ -1.34
ZNF540-208ENST00000589857 SMIM29Q86T20 159 aa6.65□□□□□ -1.34
ZNF540-208ENST00000589857 C20orf197Q8N268 126 aa6.65□□□□□ -1.34
ZNF540-208ENST00000589857 KLKP1Q107X0 134 aa6.64□□□□□ -1.35
ZNF540-208ENST00000589857 PHF5AQ7RTV0 110 aaKnown RBP6.64□□□□□ -1.35
ZNF540-208ENST00000589857 DPH3Q96FX2 82 aa6.64□□□□□ -1.35
ZNF540-208ENST00000589857 EPM2AB3EWF7 344 aa6.63□□□□□ -1.35
ZNF540-208ENST00000589857 ATP5EP56381 51 aaPredicted RBP6.63□□□□□ -1.35
ZNF540-208ENST00000589857 ZNF706Q9Y5V0 76 aaPredicted RBP6.63□□□□□ -1.35
ZNF540-208ENST00000589857 IGFL1Q6UW32 110 aa6.62□□□□□ -1.35
ZNF540-208ENST00000589857 Q6ZR54 194 aa6.62□□□□□ -1.35
ZNF540-208ENST00000589857 VPS13DQ5THJ4 4388 aa6.62□□□□□ -1.35
ZNF540-208ENST00000589857 A0A087WTM6 91 aa6.61□□□□□ -1.35
ZNF540-208ENST00000589857 CHTF8P0CG12 524 aa6.61□□□□□ -1.35
ZNF540-208ENST00000589857 RPL37AP61513 92 aaKnown RBP6.61□□□□□ -1.35
ZNF540-208ENST00000589857 Q8N1X5 172 aa6.61□□□□□ -1.35
ZNF540-208ENST00000589857 SPACA4Q8TDM5 124 aa6.61□□□□□ -1.35
ZNF540-208ENST00000589857 ABCA13Q86UQ4 5058 aa6.6□□□□□ -1.35
ZNF540-208ENST00000589857 FAM236DA0A1B0GTK5 79 aa6.59□□□□□ -1.35
ZNF540-208ENST00000589857 FAM236CP0DP71 79 aa6.59□□□□□ -1.35
ZNF540-208ENST00000589857 KRTAP4-5Q9BYR2 181 aa6.59□□□□□ -1.35
ZNF540-208ENST00000589857 DNAH6Q9C0G6 4158 aa6.58□□□□□ -1.36
ZNF540-208ENST00000589857 PKHD1P08F94 4074 aa6.58□□□□□ -1.36
ZNF540-208ENST00000589857 Q8N9L7 120 aa6.57□□□□□ -1.36
ZNF540-208ENST00000589857 TMEM254Q8TBM7 123 aa6.57□□□□□ -1.36
ZNF540-208ENST00000589857 C4orf48Q5BLP8 95 aa6.56□□□□□ -1.36
ZNF540-208ENST00000589857 KRTAP13-1Q8IUC0 172 aa6.56□□□□□ -1.36
ZNF540-208ENST00000589857 OCR1Q9BZK8 76 aa6.56□□□□□ -1.36
ZNF540-208ENST00000589857 A0A087WSZ3 146 aa6.55□□□□□ -1.36
ZNF540-208ENST00000589857 HCG22E2RYF7 251 aa6.55□□□□□ -1.36
ZNF540-208ENST00000589857 DSCR10P59022 87 aa6.55□□□□□ -1.36
ZNF540-208ENST00000589857 FAT2Q9NYQ8 4349 aa6.54□□□□□ -1.36
ZNF540-208ENST00000589857 IGLV5-52A0A0A0MRZ9 124 aa6.54□□□□□ -1.36
ZNF540-208ENST00000589857 H7BZZ5 65 aa6.54□□□□□ -1.36
ZNF540-208ENST00000589857 PLAC8Q9NZF1 115 aa6.54□□□□□ -1.36
ZNF540-208ENST00000589857 DNAH2Q9P225 4427 aa6.54□□□□□ -1.36
ZNF540-208ENST00000589857 DNAH11Q96DT5 4516 aa6.54□□□□□ -1.36
ZNF540-208ENST00000589857 LINC00483Q53H64 154 aa6.53□□□□□ -1.36
ZNF540-208ENST00000589857 CYSTM1Q9H1C7 97 aa6.53□□□□□ -1.36
ZNF540-208ENST00000589857 SERP1Q9Y6X1 66 aa6.53□□□□□ -1.36
ZNF540-208ENST00000589857 C5orf47Q569G3 176 aa6.52□□□□□ -1.37
ZNF540-208ENST00000589857 KRTAP11-1Q8IUC1 163 aa6.52□□□□□ -1.37
ZNF540-208ENST00000589857 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.52□□□□□ -1.37
ZNF540-208ENST00000589857 A0A0U1RQV1 116 aa6.51□□□□□ -1.37
ZNF540-208ENST00000589857 K7EQZ3 153 aa6.51□□□□□ -1.37
ZNF540-208ENST00000589857 NDUFB1O75438 58 aa6.51□□□□□ -1.37
ZNF540-208ENST00000589857 SNURFQ9Y675 71 aa6.51□□□□□ -1.37
ZNF540-208ENST00000589857 DNAH17Q9UFH2 4485 aa6.5□□□□□ -1.37
ZNF540-208ENST00000589857 DYNC1H1Q14204 4646 aaKnown RBP6.49□□□□□ -1.37
ZNF540-208ENST00000589857 A8MWP4 228 aa6.49□□□□□ -1.37
ZNF540-208ENST00000589857 PANO1I0J062 215 aa6.49□□□□□ -1.37
ZNF540-208ENST00000589857 ZNF861PO60384 105 aa6.49□□□□□ -1.37
ZNF540-208ENST00000589857 PKD1P98161 4303 aa6.49□□□□□ -1.37
ZNF540-208ENST00000589857 H3BPC8 53 aa6.48□□□□□ -1.37
ZNF540-208ENST00000589857 PRR15Q8IV56 129 aa6.48□□□□□ -1.37
ZNF540-208ENST00000589857 FAM30AQ9NZY2 134 aa6.48□□□□□ -1.37
ZNF540-208ENST00000589857 MP68P56378 58 aa6.47□□□□□ -1.37
ZNF540-208ENST00000589857 LINC00472Q9H8W2 130 aa6.46□□□□□ -1.38
ZNF540-208ENST00000589857 PSORS1C2Q9UIG4 136 aa6.46□□□□□ -1.38
ZNF540-208ENST00000589857 HSPG2P98160 4391 aa6.45□□□□□ -1.38
ZNF540-208ENST00000589857 LOC100996750A0A140TA64 210 aa6.45□□□□□ -1.38
ZNF540-208ENST00000589857 CASC2Q6XLA1 102 aa6.45□□□□□ -1.38
ZNF540-208ENST00000589857 KRTAP4-6Q9BYQ5 205 aa6.45□□□□□ -1.38
ZNF540-208ENST00000589857 IGLV9-49A0A0B4J1Y8 123 aa6.44□□□□□ -1.38
ZNF540-208ENST00000589857 FAM229AH3BQW9 127 aa6.44□□□□□ -1.38
ZNF540-208ENST00000589857 DMBT1Q9UGM3 2413 aaPredicted RBP6.43□□□□□ -1.38
ZNF540-208ENST00000589857 A0A0G2JQZ4 141 aa6.43□□□□□ -1.38
ZNF540-208ENST00000589857 MOBPQ13875 183 aa6.42□□□□□ -1.38
ZNF540-208ENST00000589857 WFDC13Q8IUB5 93 aa6.42□□□□□ -1.38
ZNF540-208ENST00000589857 SMIM26A0A096LP01 95 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms