RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 OCIAD2Q56VL3 154 aa12.72□□□□□ -0.37
R3HDM4-204ENST00000589428 SPRR4Q96PI1 79 aa12.72□□□□□ -0.37
R3HDM4-204ENST00000589428 KRTAP1-4P0C5Y4 121 aa12.71□□□□□ -0.37
R3HDM4-204ENST00000589428 BAALC-AS2P0C853 105 aa12.71□□□□□ -0.37
R3HDM4-204ENST00000589428 Q8N377 158 aa12.71□□□□□ -0.37
R3HDM4-204ENST00000589428 MT1HL1P0DM35 61 aa12.7□□□□□ -0.38
R3HDM4-204ENST00000589428 GAGE2AQ6NT46 116 aa12.7□□□□□ -0.38
R3HDM4-204ENST00000589428 SMCPP49901 116 aaPredicted RBP12.69□□□□□ -0.38
R3HDM4-204ENST00000589428 ZNF706Q9Y5V0 76 aaPredicted RBP12.69□□□□□ -0.38
R3HDM4-204ENST00000589428 TEX49A0A1B0GTD5 131 aa12.68□□□□□ -0.38
R3HDM4-204ENST00000589428 H3BT86 120 aa12.68□□□□□ -0.38
R3HDM4-204ENST00000589428 TNXBP22105 4242 aa12.66□□□□□ -0.38
R3HDM4-204ENST00000589428 TMEM256-PLSCR3K7ERE1 68 aa12.66□□□□□ -0.38
R3HDM4-204ENST00000589428 SPRR1BP22528 89 aa12.66□□□□□ -0.38
R3HDM4-204ENST00000589428 ANKRD29Q8N6D5 301 aa12.66□□□□□ -0.38
R3HDM4-204ENST00000589428 PRR26Q8N8Z3 221 aa12.66□□□□□ -0.38
R3HDM4-204ENST00000589428 PPDPFLQ8WWR9 84 aa12.66□□□□□ -0.38
R3HDM4-204ENST00000589428 GHRHP01286 108 aa12.65□□□□□ -0.38
R3HDM4-204ENST00000589428 LINC00483Q53H64 154 aa12.65□□□□□ -0.38
R3HDM4-204ENST00000589428 F8W1H4 67 aa12.65□□□□□ -0.38
R3HDM4-204ENST00000589428 H3BQ85 93 aa12.65□□□□□ -0.38
R3HDM4-204ENST00000589428 C3orf22Q8N5N4 141 aa12.65□□□□□ -0.38
R3HDM4-204ENST00000589428 KRTAP10-8P60410 259 aa12.64□□□□□ -0.39
R3HDM4-204ENST00000589428 ANAPC11Q9NYG5 84 aa12.64□□□□□ -0.39
R3HDM4-204ENST00000589428 SMIM29Q86T20 159 aa12.63□□□□□ -0.39
R3HDM4-204ENST00000589428 HERC1Q15751 4861 aa12.61□□□□□ -0.39
R3HDM4-204ENST00000589428 CRYGAP11844 174 aa12.59□□□□□ -0.39
R3HDM4-204ENST00000589428 NDUFV3P56181 108 aaKnown RBP12.59□□□□□ -0.39
R3HDM4-204ENST00000589428 FAM229BQ4G0N7 80 aa12.59□□□□□ -0.39
R3HDM4-204ENST00000589428 LAMTOR3Q9UHA4 124 aa12.58□□□□□ -0.4
R3HDM4-204ENST00000589428 A0A087X002 238 aa12.57□□□□□ -0.4
R3HDM4-204ENST00000589428 A0A1B0GV72 72 aa12.57□□□□□ -0.4
R3HDM4-204ENST00000589428 ETDBQ3ZM63 59 aa12.53□□□□□ -0.4
R3HDM4-204ENST00000589428 TYMSOSQ8TAI1 123 aa12.52□□□□□ -0.41
R3HDM4-204ENST00000589428 IGLV9-49A0A0B4J1Y8 123 aa12.51□□□□□ -0.41
R3HDM4-204ENST00000589428 F8WEM9 126 aa12.51□□□□□ -0.41
R3HDM4-204ENST00000589428 TEN1Q86WV5 123 aa12.51□□□□□ -0.41
R3HDM4-204ENST00000589428 OBSCN-AS1Q96MR7 158 aa12.51□□□□□ -0.41
R3HDM4-204ENST00000589428 JMJD7-PLA2G4BH0Y9G9 81 aa12.48□□□□□ -0.41
R3HDM4-204ENST00000589428 KRTAP13-2Q52LG2 175 aa12.48□□□□□ -0.41
R3HDM4-204ENST00000589428 IGLV8-61A0A075B6I0 122 aa12.48□□□□□ -0.41
R3HDM4-204ENST00000589428 RBM3P98179 157 aaKnown RBP12.47□□□□□ -0.41
R3HDM4-204ENST00000589428 MOBPQ13875 183 aa12.47□□□□□ -0.41
R3HDM4-204ENST00000589428 C9orf153Q5TBE3 101 aa12.47□□□□□ -0.41
R3HDM4-204ENST00000589428 C14orf132Q9NPU4 83 aa12.45□□□□□ -0.42
R3HDM4-204ENST00000589428 Q8NBF4 154 aa12.44□□□□□ -0.42
R3HDM4-204ENST00000589428 A0A0G2JQZ4 141 aa12.42□□□□□ -0.42
R3HDM4-204ENST00000589428 TRBV7-4A0A0J9YYF1 115 aa12.42□□□□□ -0.42
R3HDM4-204ENST00000589428 DSCR8Q96T75 97 aa12.42□□□□□ -0.42
R3HDM4-204ENST00000589428 IGFL1Q6UW32 110 aa12.41□□□□□ -0.42
R3HDM4-204ENST00000589428 K7ERU9 68 aa12.4□□□□□ -0.43
R3HDM4-204ENST00000589428 Q6JHZ5 121 aa12.4□□□□□ -0.43
R3HDM4-204ENST00000589428 LOC110117498A0A087WWA1 95 aa12.39□□□□□ -0.43
R3HDM4-204ENST00000589428 LINC00304Q8N9R0 145 aa12.38□□□□□ -0.43
R3HDM4-204ENST00000589428 Q6ZQT0 140 aa12.37□□□□□ -0.43
R3HDM4-204ENST00000589428 SSBP3-AS1Q7Z2R9 100 aa12.36□□□□□ -0.43
R3HDM4-204ENST00000589428 PDE6GP18545 87 aa12.34□□□□□ -0.43
R3HDM4-204ENST00000589428 A0A1W2PNM2 257 aa12.33□□□□□ -0.44
R3HDM4-204ENST00000589428 CCKP06307 115 aa12.33□□□□□ -0.44
R3HDM4-204ENST00000589428 VPS25Q9BRG1 176 aa12.31□□□□□ -0.44
R3HDM4-204ENST00000589428 J3QR89 54 aa12.3□□□□□ -0.44
R3HDM4-204ENST00000589428 C4orf48Q5BLP8 95 aa12.29□□□□□ -0.44
R3HDM4-204ENST00000589428 SPAG11AQ6PDA7 123 aa12.29□□□□□ -0.44
R3HDM4-204ENST00000589428 HMCN2Q8NDA2 5059 aa12.28□□□□□ -0.44
R3HDM4-204ENST00000589428 HRCT1Q6UXD1 115 aa12.27□□□□□ -0.45
R3HDM4-204ENST00000589428 Q6Q795 121 aa12.26□□□□□ -0.45
R3HDM4-204ENST00000589428 C21orf62-AS1Q17RA5 79 aa12.23□□□□□ -0.45
R3HDM4-204ENST00000589428 CD164Q04900 197 aa12.23□□□□□ -0.45
R3HDM4-204ENST00000589428 TRBV7-7A0A0K0K1E9 115 aa12.22□□□□□ -0.45
R3HDM4-204ENST00000589428 SPINK1P00995 79 aa12.2□□□□□ -0.46
R3HDM4-204ENST00000589428 A0A087WSZ3 146 aa12.19□□□□□ -0.46
R3HDM4-204ENST00000589428 A0A1B0GW54 56 aa12.16□□□□□ -0.46
R3HDM4-204ENST00000589428 PRR4Q16378 134 aa12.16□□□□□ -0.46
R3HDM4-204ENST00000589428 FAM240AA0A1B0GVK7 77 aa12.15□□□□□ -0.46
R3HDM4-204ENST00000589428 RPS29P62273 56 aaKnown RBP12.14□□□□□ -0.47
R3HDM4-204ENST00000589428 LINC00846Q9NV44 126 aa12.14□□□□□ -0.47
R3HDM4-204ENST00000589428 RETNLBQ9BQ08 111 aa12.13□□□□□ -0.47
R3HDM4-204ENST00000589428 ACYP1P07311 99 aa12.11□□□□□ -0.47
R3HDM4-204ENST00000589428 CDIP1Q9H305 208 aa12.08□□□□□ -0.47
R3HDM4-204ENST00000589428 SS18L2Q9UHA2 77 aa12.08□□□□□ -0.47
R3HDM4-204ENST00000589428 Q5XG85 94 aa12.08□□□□□ -0.48
R3HDM4-204ENST00000589428 LIMD2Q9BT23 127 aa12.07□□□□□ -0.48
R3HDM4-204ENST00000589428 Q6ZVQ6 151 aa12.04□□□□□ -0.48
R3HDM4-204ENST00000589428 NREPQ16612 68 aa12.03□□□□□ -0.48
R3HDM4-204ENST00000589428 UBL5Q9BZL1 73 aa12.03□□□□□ -0.48
R3HDM4-204ENST00000589428 ASB16-AS1Q495Z4 193 aa12.02□□□□□ -0.49
R3HDM4-204ENST00000589428 LRP2P98164 4655 aa12.01□□□□□ -0.49
R3HDM4-204ENST00000589428 Q96NJ1 140 aa12.01□□□□□ -0.49
R3HDM4-204ENST00000589428 FP248Q71RG6 208 aaPredicted RBP12□□□□□ -0.49
R3HDM4-204ENST00000589428 IGLV7-46A0A075B6I9 117 aa12□□□□□ -0.49
R3HDM4-204ENST00000589428 LINC00472Q9H8W2 130 aa12□□□□□ -0.49
R3HDM4-204ENST00000589428 LPAP08519 4548 aa11.97□□□□□ -0.49
R3HDM4-204ENST00000589428 DEFB116Q30KQ4 102 aa11.97□□□□□ -0.49
R3HDM4-204ENST00000589428 C1orf195Q5TG92 126 aa11.97□□□□□ -0.49
R3HDM4-204ENST00000589428 SIGMAR1Q99720 223 aa11.97□□□□□ -0.49
R3HDM4-204ENST00000589428 TPRXLQ17RH7 258 aa11.91□□□□□ -0.5
R3HDM4-204ENST00000589428 MT-ATP8P03928 68 aa11.9□□□□□ -0.5
R3HDM4-204ENST00000589428 BPY2O14599 106 aa11.89□□□□□ -0.51
R3HDM4-204ENST00000589428 IGKV4-1P06312 121 aa11.89□□□□□ -0.51
R3HDM4-204ENST00000589428 LINC00643Q86TS7 51 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms