RNA–Protein interactions for RNA: ENST00000589146.5

CAPNS1-207, Transcript of calpain small subunit 1, humanhuman

TSL 3 BASIC

Gene CAPNS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-207ENST00000589146 C3orf22Q8N5N4 141 aa13.87□□□□□ -0.19
CAPNS1-207ENST00000589146 LRP1BQ9NZR2 4599 aa13.86□□□□□ -0.19
CAPNS1-207ENST00000589146 EPPK1P58107 5090 aaKnown RBP13.85□□□□□ -0.19
CAPNS1-207ENST00000589146 IGLV8-61A0A075B6I0 122 aa13.85□□□□□ -0.19
CAPNS1-207ENST00000589146 SPRR4Q96PI1 79 aa13.84□□□□□ -0.19
CAPNS1-207ENST00000589146 ZNF706Q9Y5V0 76 aaPredicted RBP13.84□□□□□ -0.19
CAPNS1-207ENST00000589146 LINC00483Q53H64 154 aa13.83□□□□□ -0.2
CAPNS1-207ENST00000589146 HAMPP81172 84 aa13.82□□□□□ -0.2
CAPNS1-207ENST00000589146 F8WEM9 126 aa13.81□□□□□ -0.2
CAPNS1-207ENST00000589146 BIRC6Q9NR09 4857 aa13.79□□□□□ -0.2
CAPNS1-207ENST00000589146 LINC00846Q9NV44 126 aa13.79□□□□□ -0.2
CAPNS1-207ENST00000589146 PKHD1P08F94 4074 aa13.79□□□□□ -0.2
CAPNS1-207ENST00000589146 XGP55808 180 aa13.77□□□□□ -0.21
CAPNS1-207ENST00000589146 SIGMAR1Q99720 223 aa13.77□□□□□ -0.21
CAPNS1-207ENST00000589146 A0A1B0GW54 56 aa13.75□□□□□ -0.21
CAPNS1-207ENST00000589146 LINC00643Q86TS7 51 aa13.74□□□□□ -0.21
CAPNS1-207ENST00000589146 Q6JHZ5 121 aa13.72□□□□□ -0.21
CAPNS1-207ENST00000589146 A0A1W2PNM2 257 aa13.71□□□□□ -0.21
CAPNS1-207ENST00000589146 Q8NBF4 154 aa13.71□□□□□ -0.21
CAPNS1-207ENST00000589146 MT-ATP8P03928 68 aa13.7□□□□□ -0.22
CAPNS1-207ENST00000589146 IGFL1Q6UW32 110 aa13.7□□□□□ -0.22
CAPNS1-207ENST00000589146 APOBP04114 4563 aaKnown RBP13.69□□□□□ -0.22
CAPNS1-207ENST00000589146 RPL37AP61513 92 aaKnown RBP13.67□□□□□ -0.22
CAPNS1-207ENST00000589146 SRRM2Q9UQ35 2752 aaKnown RBP13.66□□□□□ -0.22
CAPNS1-207ENST00000589146 UBL5Q9BZL1 73 aa13.66□□□□□ -0.22
CAPNS1-207ENST00000589146 CRYGAP11844 174 aa13.64□□□□□ -0.23
CAPNS1-207ENST00000589146 Q6Q795 121 aa13.62□□□□□ -0.23
CAPNS1-207ENST00000589146 Q6ZVQ6 151 aa13.61□□□□□ -0.23
CAPNS1-207ENST00000589146 TRBV7-7A0A0K0K1E9 115 aa13.6□□□□□ -0.23
CAPNS1-207ENST00000589146 ATP5EP2Q5VTU8 51 aa13.59□□□□□ -0.23
CAPNS1-207ENST00000589146 VPS13BQ7Z7G8 4022 aa13.59□□□□□ -0.23
CAPNS1-207ENST00000589146 A0A0G2JQZ4 141 aa13.58□□□□□ -0.24
CAPNS1-207ENST00000589146 ANAPC11Q9NYG5 84 aa13.58□□□□□ -0.24
CAPNS1-207ENST00000589146 IGLV9-49A0A0B4J1Y8 123 aa13.57□□□□□ -0.24
CAPNS1-207ENST00000589146 IMUPQ9GZP8 106 aa13.57□□□□□ -0.24
CAPNS1-207ENST00000589146 FAM229BQ4G0N7 80 aa13.56□□□□□ -0.24
CAPNS1-207ENST00000589146 C9orf153Q5TBE3 101 aa13.56□□□□□ -0.24
CAPNS1-207ENST00000589146 SPINK6Q6UWN8 80 aa13.55□□□□□ -0.24
CAPNS1-207ENST00000589146 SMR3BP02814 79 aaPredicted RBP13.53□□□□□ -0.24
CAPNS1-207ENST00000589146 SCGB1A1P11684 91 aa13.52□□□□□ -0.25
CAPNS1-207ENST00000589146 KRTAP10-4P60372 401 aaPredicted RBP13.52□□□□□ -0.25
CAPNS1-207ENST00000589146 MOBPQ13875 183 aa13.52□□□□□ -0.25
CAPNS1-207ENST00000589146 NREPQ16612 68 aa13.52□□□□□ -0.25
CAPNS1-207ENST00000589146 IGKV3D-7A0A0C4DH55 119 aa13.5□□□□□ -0.25
CAPNS1-207ENST00000589146 KRTAP1-4P0C5Y4 121 aa13.5□□□□□ -0.25
CAPNS1-207ENST00000589146 CDK2AP2O75956 126 aa13.49□□□□□ -0.25
CAPNS1-207ENST00000589146 CXCL6P80162 114 aa13.49□□□□□ -0.25
CAPNS1-207ENST00000589146 SSBP3-AS1Q7Z2R9 100 aa13.49□□□□□ -0.25
CAPNS1-207ENST00000589146 A0A087WSZ3 146 aa13.45□□□□□ -0.26
CAPNS1-207ENST00000589146 A0A087X002 238 aa13.42□□□□□ -0.26
CAPNS1-207ENST00000589146 CD164Q04900 197 aa13.42□□□□□ -0.26
CAPNS1-207ENST00000589146 KRTAP13-2Q52LG2 175 aa13.42□□□□□ -0.26
CAPNS1-207ENST00000589146 FAT1Q14517 4588 aa13.41□□□□□ -0.26
CAPNS1-207ENST00000589146 BPY2O14599 106 aa13.39□□□□□ -0.27
CAPNS1-207ENST00000589146 PLA2G1BP04054 148 aaKnown RBP13.38□□□□□ -0.27
CAPNS1-207ENST00000589146 PKHD1L1Q86WI1 4243 aa13.36□□□□□ -0.27
CAPNS1-207ENST00000589146 FAM229AH3BQW9 127 aa13.35□□□□□ -0.27
CAPNS1-207ENST00000589146 KRTAP17-1Q9BYP8 105 aa13.34□□□□□ -0.27
CAPNS1-207ENST00000589146 LINC00472Q9H8W2 130 aa13.33□□□□□ -0.28
CAPNS1-207ENST00000589146 SS18L2Q9UHA2 77 aa13.33□□□□□ -0.28
CAPNS1-207ENST00000589146 HSPG2P98160 4391 aa13.33□□□□□ -0.28
CAPNS1-207ENST00000589146 RYR1P21817 5038 aa13.32□□□□□ -0.28
CAPNS1-207ENST00000589146 HIST1H4AP62805 103 aaKnown RBP13.32□□□□□ -0.28
CAPNS1-207ENST00000589146 HRCT1Q6UXD1 115 aa13.32□□□□□ -0.28
CAPNS1-207ENST00000589146 DSCR10P59022 87 aa13.29□□□□□ -0.28
CAPNS1-207ENST00000589146 A0A087WVE0 104 aa13.28□□□□□ -0.28
CAPNS1-207ENST00000589146 IGKV4-1P06312 121 aa13.27□□□□□ -0.29
CAPNS1-207ENST00000589146 FAM236AA0A1B0GUQ0 79 aa13.25□□□□□ -0.29
CAPNS1-207ENST00000589146 FAM236BA0A1B0GV22 79 aa13.25□□□□□ -0.29
CAPNS1-207ENST00000589146 J3KT08 172 aa13.25□□□□□ -0.29
CAPNS1-207ENST00000589146 TYMSOSQ8TAI1 123 aa13.25□□□□□ -0.29
CAPNS1-207ENST00000589146 Q96NJ1 140 aa13.25□□□□□ -0.29
CAPNS1-207ENST00000589146 HERC2O95714 4834 aa13.25□□□□□ -0.29
CAPNS1-207ENST00000589146 ASB16-AS1Q495Z4 193 aa13.24□□□□□ -0.29
CAPNS1-207ENST00000589146 Q5VSD8 79 aa13.24□□□□□ -0.29
CAPNS1-207ENST00000589146 Q5XG85 94 aa13.24□□□□□ -0.29
CAPNS1-207ENST00000589146 PRR26Q8N8Z3 221 aa13.22□□□□□ -0.29
CAPNS1-207ENST00000589146 Q8N9L7 120 aa13.21□□□□□ -0.29
CAPNS1-207ENST00000589146 DEFB116Q30KQ4 102 aa13.2□□□□□ -0.3
CAPNS1-207ENST00000589146 PCP4P48539 62 aa13.18□□□□□ -0.3
CAPNS1-207ENST00000589146 K7EQZ3 153 aa13.17□□□□□ -0.3
CAPNS1-207ENST00000589146 A8MWP4 228 aa13.16□□□□□ -0.3
CAPNS1-207ENST00000589146 C4orf48Q5BLP8 95 aa13.14□□□□□ -0.31
CAPNS1-207ENST00000589146 SPAG11AQ6PDA7 123 aa13.14□□□□□ -0.31
CAPNS1-207ENST00000589146 Q8N1X5 172 aa13.14□□□□□ -0.31
CAPNS1-207ENST00000589146 ATOX1O00244 68 aa13.13□□□□□ -0.31
CAPNS1-207ENST00000589146 SPINK1P00995 79 aa13.13□□□□□ -0.31
CAPNS1-207ENST00000589146 PRR15Q8IV56 129 aa13.13□□□□□ -0.31
CAPNS1-207ENST00000589146 RPS29P62273 56 aaKnown RBP13.12□□□□□ -0.31
CAPNS1-207ENST00000589146 LIMD2Q9BT23 127 aa13.12□□□□□ -0.31
CAPNS1-207ENST00000589146 LINC00304Q8N9R0 145 aa13.11□□□□□ -0.31
CAPNS1-207ENST00000589146 ANAPC13Q9BS18 74 aa13.1□□□□□ -0.31
CAPNS1-207ENST00000589146 KIAA1109Q2LD37 5005 aa13.08□□□□□ -0.31
CAPNS1-207ENST00000589146 PCLOQ9Y6V0 5065 aa13.08□□□□□ -0.32
CAPNS1-207ENST00000589146 NDUFB1O75438 58 aa13.07□□□□□ -0.32
CAPNS1-207ENST00000589146 HCG22E2RYF7 251 aa13.04□□□□□ -0.32
CAPNS1-207ENST00000589146 C1orf195Q5TG92 126 aa13.04□□□□□ -0.32
CAPNS1-207ENST00000589146 A0A1B0GVX0 72 aa13.01□□□□□ -0.33
CAPNS1-207ENST00000589146 KRTAP10-8P60410 259 aa13□□□□□ -0.33
CAPNS1-207ENST00000589146 SMIM20Q8N5G0 67 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms