RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 CFC1P0CG37 223 aa7.26□□□□□ -1.25
VMP1-209ENST00000588915 CLEC2BQ92478 149 aa7.26□□□□□ -1.25
VMP1-209ENST00000588915 Q6Q795 121 aa7.25□□□□□ -1.25
VMP1-209ENST00000588915 LINC00575Q6W349 94 aa7.25□□□□□ -1.25
VMP1-209ENST00000588915 C20orf202A1L168 122 aa7.24□□□□□ -1.25
VMP1-209ENST00000588915 ANKRD39Q53RE8 183 aa7.24□□□□□ -1.25
VMP1-209ENST00000588915 OBSCN-AS1Q96MR7 158 aa7.24□□□□□ -1.25
VMP1-209ENST00000588915 KRTDAPP60985 99 aa7.23□□□□□ -1.25
VMP1-209ENST00000588915 OCIAD2Q56VL3 154 aa7.23□□□□□ -1.25
VMP1-209ENST00000588915 IGFL1Q6UW32 110 aa7.23□□□□□ -1.25
VMP1-209ENST00000588915 hADV29S1A0JD25 119 aa7.22□□□□□ -1.25
VMP1-209ENST00000588915 COA6Q5JTJ3 125 aaKnown RBP7.22□□□□□ -1.25
VMP1-209ENST00000588915 KRTAP9-7A8MTY7 169 aa7.21□□□□□ -1.26
VMP1-209ENST00000588915 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.21□□□□□ -1.26
VMP1-209ENST00000588915 Q6ZQY7 126 aa7.21□□□□□ -1.26
VMP1-209ENST00000588915 SLC7A5P1Q8MH63 180 aa7.21□□□□□ -1.26
VMP1-209ENST00000588915 PPDPFLQ8WWR9 84 aa7.2□□□□□ -1.26
VMP1-209ENST00000588915 LST1O00453 97 aa7.19□□□□□ -1.26
VMP1-209ENST00000588915 SNRPEP62304 92 aaKnown RBP7.19□□□□□ -1.26
VMP1-209ENST00000588915 KRTAP9-8Q9BYQ0 159 aa7.19□□□□□ -1.26
VMP1-209ENST00000588915 SCGB1D1O95968 90 aa7.18□□□□□ -1.26
VMP1-209ENST00000588915 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.18□□□□□ -1.26
VMP1-209ENST00000588915 Q96NJ1 140 aa7.17□□□□□ -1.26
VMP1-209ENST00000588915 C20orf166-AS1Q96NR2 134 aa7.17□□□□□ -1.26
VMP1-209ENST00000588915 TRBV20-1A0A075B6N2 111 aa7.16□□□□□ -1.26
VMP1-209ENST00000588915 ATOH7Q8N100 152 aa7.16□□□□□ -1.26
VMP1-209ENST00000588915 SS18L2Q9UHA2 77 aa7.15□□□□□ -1.26
VMP1-209ENST00000588915 A8MUU9 505 aa7.14□□□□□ -1.27
VMP1-209ENST00000588915 BVES-AS1Q5T3Y7 98 aa7.14□□□□□ -1.27
VMP1-209ENST00000588915 SNHG12Q9BXW3 62 aa7.14□□□□□ -1.27
VMP1-209ENST00000588915 SSPOA2VEC9 5147 aa7.12□□□□□ -1.27
VMP1-209ENST00000588915 USH2AO75445 5202 aa7.11□□□□□ -1.27
VMP1-209ENST00000588915 TEN1Q86WV5 123 aa7.1□□□□□ -1.27
VMP1-209ENST00000588915 H3BUT2 72 aa7.08□□□□□ -1.28
VMP1-209ENST00000588915 HSBP1L1C9JCN9 74 aa7.06□□□□□ -1.28
VMP1-209ENST00000588915 SNCGO76070 127 aa7.06□□□□□ -1.28
VMP1-209ENST00000588915 C12orf57Q99622 126 aa7.06□□□□□ -1.28
VMP1-209ENST00000588915 MT2AP02795 61 aa7.03□□□□□ -1.28
VMP1-209ENST00000588915 A0A087WSZ3 146 aa7.02□□□□□ -1.29
VMP1-209ENST00000588915 H0YGX0 51 aa7.02□□□□□ -1.29
VMP1-209ENST00000588915 GHRHP01286 108 aa7.02□□□□□ -1.29
VMP1-209ENST00000588915 NDUFV3P56181 108 aaKnown RBP7.02□□□□□ -1.29
VMP1-209ENST00000588915 FAM236DA0A1B0GTK5 79 aa7□□□□□ -1.29
VMP1-209ENST00000588915 FAM236CP0DP71 79 aa7□□□□□ -1.29
VMP1-209ENST00000588915 DSCR10P59022 87 aa7□□□□□ -1.29
VMP1-209ENST00000588915 HIST1H4GQ99525 98 aa7□□□□□ -1.29
VMP1-209ENST00000588915 LINC00313P59037 77 aa6.99□□□□□ -1.29
VMP1-209ENST00000588915 KRTAP19-1Q8IUB9 90 aa6.99□□□□□ -1.29
VMP1-209ENST00000588915 MPLKIPQ8TAP9 179 aa6.99□□□□□ -1.29
VMP1-209ENST00000588915 RBM12B-AS1Q9P1G2 102 aa6.99□□□□□ -1.29
VMP1-209ENST00000588915 FCGBPQ9Y6R7 5405 aaPredicted RBP6.99□□□□□ -1.29
VMP1-209ENST00000588915 KRTAP16-1A8MUX0 517 aa6.98□□□□□ -1.29
VMP1-209ENST00000588915 H3BMG7 143 aa6.98□□□□□ -1.29
VMP1-209ENST00000588915 LCE2BO14633 110 aa6.98□□□□□ -1.29
VMP1-209ENST00000588915 KRTAP9-3Q9BYQ3 159 aa6.98□□□□□ -1.29
VMP1-209ENST00000588915 MT1FP04733 61 aa6.97□□□□□ -1.29
VMP1-209ENST00000588915 HIST1H2BLQ99880 126 aa6.97□□□□□ -1.29
VMP1-209ENST00000588915 A0A1B0GX51 115 aa6.96□□□□□ -1.3
VMP1-209ENST00000588915 S100A2P29034 98 aa6.96□□□□□ -1.3
VMP1-209ENST00000588915 HIST3H2BBQ8N257 126 aa6.96□□□□□ -1.3
VMP1-209ENST00000588915 HRES1P13985 223 aa6.95□□□□□ -1.3
VMP1-209ENST00000588915 KRTAP10-10P60014 251 aa6.95□□□□□ -1.3
VMP1-209ENST00000588915 DLEU1O43261 78 aa6.94□□□□□ -1.3
VMP1-209ENST00000588915 RAB37Q96AX2 223 aa6.94□□□□□ -1.3
VMP1-209ENST00000588915 FAM218AQ96MZ4 157 aa6.94□□□□□ -1.3
VMP1-209ENST00000588915 SIGMAR1Q99720 223 aa6.94□□□□□ -1.3
VMP1-209ENST00000588915 COX8AP10176 69 aa6.93□□□□□ -1.3
VMP1-209ENST00000588915 A0A0B4J2C4 111 aa6.92□□□□□ -1.3
VMP1-209ENST00000588915 A0A1W2PNM2 257 aa6.92□□□□□ -1.3
VMP1-209ENST00000588915 IGKV4-1P06312 121 aa6.92□□□□□ -1.3
VMP1-209ENST00000588915 LINC00846Q9NV44 126 aa6.92□□□□□ -1.3
VMP1-209ENST00000588915 TRBV7-4A0A0J9YYF1 115 aa6.91□□□□□ -1.3
VMP1-209ENST00000588915 FABP2P12104 132 aa6.91□□□□□ -1.3
VMP1-209ENST00000588915 NOTCH2NLQ7Z3S9 236 aa6.91□□□□□ -1.3
VMP1-209ENST00000588915 MTURNQ8N3F0 131 aa6.89□□□□□ -1.31
VMP1-209ENST00000588915 HIGD1BQ9P298 99 aa6.89□□□□□ -1.31
VMP1-209ENST00000588915 ANKRD29Q8N6D5 301 aa6.88□□□□□ -1.31
VMP1-209ENST00000588915 H3BQ85 93 aa6.87□□□□□ -1.31
VMP1-209ENST00000588915 LINC00472Q9H8W2 130 aa6.87□□□□□ -1.31
VMP1-209ENST00000588915 S100A6P06703 90 aa6.84□□□□□ -1.31
VMP1-209ENST00000588915 PRO1854Q9UHT4 67 aa6.84□□□□□ -1.31
VMP1-209ENST00000588915 KRTAP19-6Q3LI70 58 aa6.83□□□□□ -1.32
VMP1-209ENST00000588915 IGHV6-1A0A0B4J1U7 121 aa6.82□□□□□ -1.32
VMP1-209ENST00000588915 C8orf87E5RJ46 101 aa6.82□□□□□ -1.32
VMP1-209ENST00000588915 C14orf144Q96I85 54 aa6.82□□□□□ -1.32
VMP1-209ENST00000588915 ORMDL1Q9P0S3 153 aa6.82□□□□□ -1.32
VMP1-209ENST00000588915 TMEM238LA0A1B0GVL6 79 aa6.81□□□□□ -1.32
VMP1-209ENST00000588915 A6NJY4 79 aa6.81□□□□□ -1.32
VMP1-209ENST00000588915 TMEM256-PLSCR3K7ERE1 68 aa6.81□□□□□ -1.32
VMP1-209ENST00000588915 DEFB116Q30KQ4 102 aa6.81□□□□□ -1.32
VMP1-209ENST00000588915 CEND1Q8N111 149 aa6.81□□□□□ -1.32
VMP1-209ENST00000588915 DNAL4O96015 105 aa6.8□□□□□ -1.32
VMP1-209ENST00000588915 TRACP01848 142 aa6.8□□□□□ -1.32
VMP1-209ENST00000588915 TRIAP1O43715 76 aa6.79□□□□□ -1.32
VMP1-209ENST00000588915 CCKP06307 115 aa6.79□□□□□ -1.32
VMP1-209ENST00000588915 C2orf91Q6ZV80 131 aa6.79□□□□□ -1.32
VMP1-209ENST00000588915 A0A1B0GVX0 72 aa6.77□□□□□ -1.33
VMP1-209ENST00000588915 A8MWP4 228 aa6.77□□□□□ -1.33
VMP1-209ENST00000588915 SPINK7P58062 85 aa6.77□□□□□ -1.33
VMP1-209ENST00000588915 ZCCHC13Q8WW36 166 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms