RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 FAT3Q8TDW7 4589 aa10.09□□□□□ -0.79
SCAMP4-211ENST00000588907 F8WEM9 126 aa10.07□□□□□ -0.8
SCAMP4-211ENST00000588907 FLG2Q5D862 2391 aaPredicted RBP10.07□□□□□ -0.8
SCAMP4-211ENST00000588907 A0A087X002 238 aa10.06□□□□□ -0.8
SCAMP4-211ENST00000588907 KRTAP29-1A8MX34 341 aaPredicted RBP10.06□□□□□ -0.8
SCAMP4-211ENST00000588907 GTF2H5Q6ZYL4 71 aa10.06□□□□□ -0.8
SCAMP4-211ENST00000588907 ANAPC11Q9NYG5 84 aa10.06□□□□□ -0.8
SCAMP4-211ENST00000588907 MYCBP2O75592 4640 aa10.06□□□□□ -0.8
SCAMP4-211ENST00000588907 K7EP34 96 aa10.05□□□□□ -0.8
SCAMP4-211ENST00000588907 UBE2V1Q13404 147 aa10.04□□□□□ -0.8
SCAMP4-211ENST00000588907 PRR26Q8N8Z3 221 aa10.04□□□□□ -0.8
SCAMP4-211ENST00000588907 Q8NBF4 154 aa10.04□□□□□ -0.8
SCAMP4-211ENST00000588907 IGLV9-49A0A0B4J1Y8 123 aa10.03□□□□□ -0.8
SCAMP4-211ENST00000588907 H3BMG7 143 aa10.03□□□□□ -0.8
SCAMP4-211ENST00000588907 C9orf153Q5TBE3 101 aa10.03□□□□□ -0.8
SCAMP4-211ENST00000588907 SSBP3-AS1Q7Z2R9 100 aa10.03□□□□□ -0.8
SCAMP4-211ENST00000588907 SMIM29Q86T20 159 aa10.03□□□□□ -0.8
SCAMP4-211ENST00000588907 TYMSOSQ8TAI1 123 aa10.03□□□□□ -0.8
SCAMP4-211ENST00000588907 LRP1Q07954 4544 aaKnown RBP10.03□□□□□ -0.8
SCAMP4-211ENST00000588907 C9JAW5 83 aa10.02□□□□□ -0.81
SCAMP4-211ENST00000588907 BAALC-AS2P0C853 105 aa10.02□□□□□ -0.81
SCAMP4-211ENST00000588907 TNXBP22105 4242 aa10.02□□□□□ -0.81
SCAMP4-211ENST00000588907 H3BT86 120 aa10.01□□□□□ -0.81
SCAMP4-211ENST00000588907 NDUFV3P56181 108 aaKnown RBP10.01□□□□□ -0.81
SCAMP4-211ENST00000588907 MOBPQ13875 183 aa10.01□□□□□ -0.81
SCAMP4-211ENST00000588907 KRTAP13-2Q52LG2 175 aa10.01□□□□□ -0.81
SCAMP4-211ENST00000588907 C3orf22Q8N5N4 141 aa10□□□□□ -0.81
SCAMP4-211ENST00000588907 IGLV8-61A0A075B6I0 122 aa9.99□□□□□ -0.81
SCAMP4-211ENST00000588907 KRTAP10-8P60410 259 aa9.99□□□□□ -0.81
SCAMP4-211ENST00000588907 Q6JHZ5 121 aa9.99□□□□□ -0.81
SCAMP4-211ENST00000588907 ANKRD29Q8N6D5 301 aa9.98□□□□□ -0.81
SCAMP4-211ENST00000588907 PCLOQ9Y6V0 5065 aa9.96□□□□□ -0.81
SCAMP4-211ENST00000588907 J3QL48 77 aa9.95□□□□□ -0.82
SCAMP4-211ENST00000588907 SPAG11AQ6PDA7 123 aa9.95□□□□□ -0.82
SCAMP4-211ENST00000588907 JMJD7-PLA2G4BH0Y9G9 81 aa9.94□□□□□ -0.82
SCAMP4-211ENST00000588907 MT1HL1P0DM35 61 aa9.94□□□□□ -0.82
SCAMP4-211ENST00000588907 C4orf48Q5BLP8 95 aa9.93□□□□□ -0.82
SCAMP4-211ENST00000588907 LINC00304Q8N9R0 145 aa9.93□□□□□ -0.82
SCAMP4-211ENST00000588907 A0A1B0GV90 55 aa9.92□□□□□ -0.82
SCAMP4-211ENST00000588907 F8W1H4 67 aa9.91□□□□□ -0.82
SCAMP4-211ENST00000588907 RBM3P98179 157 aaKnown RBP9.91□□□□□ -0.82
SCAMP4-211ENST00000588907 CD164Q04900 197 aa9.91□□□□□ -0.82
SCAMP4-211ENST00000588907 C21orf62-AS1Q17RA5 79 aa9.91□□□□□ -0.82
SCAMP4-211ENST00000588907 DSCR8Q96T75 97 aa9.9□□□□□ -0.82
SCAMP4-211ENST00000588907 MTURNQ8N3F0 131 aa9.89□□□□□ -0.83
SCAMP4-211ENST00000588907 PRO0461Q9UI25 63 aa9.89□□□□□ -0.83
SCAMP4-211ENST00000588907 SPINK1P00995 79 aa9.88□□□□□ -0.83
SCAMP4-211ENST00000588907 RPS29P62273 56 aaKnown RBP9.88□□□□□ -0.83
SCAMP4-211ENST00000588907 IGFL1Q6UW32 110 aa9.88□□□□□ -0.83
SCAMP4-211ENST00000588907 PDE6GP18545 87 aa9.87□□□□□ -0.83
SCAMP4-211ENST00000588907 Q6Q795 121 aa9.85□□□□□ -0.83
SCAMP4-211ENST00000588907 OBSCN-AS1Q96MR7 158 aa9.85□□□□□ -0.83
SCAMP4-211ENST00000588907 TRBV7-4A0A0J9YYF1 115 aa9.84□□□□□ -0.83
SCAMP4-211ENST00000588907 A0A1B0GV72 72 aa9.83□□□□□ -0.84
SCAMP4-211ENST00000588907 SMCPP49901 116 aaPredicted RBP9.83□□□□□ -0.84
SCAMP4-211ENST00000588907 TEN1Q86WV5 123 aa9.83□□□□□ -0.84
SCAMP4-211ENST00000588907 LIMD2Q9BT23 127 aa9.83□□□□□ -0.84
SCAMP4-211ENST00000588907 LOC110117498A0A087WWA1 95 aa9.82□□□□□ -0.84
SCAMP4-211ENST00000588907 DMBT1Q9UGM3 2413 aaPredicted RBP9.82□□□□□ -0.84
SCAMP4-211ENST00000588907 TRBV7-7A0A0K0K1E9 115 aa9.79□□□□□ -0.84
SCAMP4-211ENST00000588907 A0A1B0GW54 56 aa9.79□□□□□ -0.84
SCAMP4-211ENST00000588907 CCKP06307 115 aa9.79□□□□□ -0.84
SCAMP4-211ENST00000588907 Q5XG85 94 aa9.78□□□□□ -0.84
SCAMP4-211ENST00000588907 HRCT1Q6UXD1 115 aa9.78□□□□□ -0.84
SCAMP4-211ENST00000588907 C14orf132Q9NPU4 83 aa9.78□□□□□ -0.84
SCAMP4-211ENST00000588907 A0A0G2JQZ4 141 aa9.77□□□□□ -0.85
SCAMP4-211ENST00000588907 Q6ZQT0 140 aa9.77□□□□□ -0.85
SCAMP4-211ENST00000588907 SS18L2Q9UHA2 77 aa9.77□□□□□ -0.85
SCAMP4-211ENST00000588907 A0A1W2PNM2 257 aa9.75□□□□□ -0.85
SCAMP4-211ENST00000588907 ETDBQ3ZM63 59 aa9.73□□□□□ -0.85
SCAMP4-211ENST00000588907 VPS25Q9BRG1 176 aa9.73□□□□□ -0.85
SCAMP4-211ENST00000588907 ASB16-AS1Q495Z4 193 aa9.71□□□□□ -0.86
SCAMP4-211ENST00000588907 A0A087WSZ3 146 aa9.7□□□□□ -0.86
SCAMP4-211ENST00000588907 FP248Q71RG6 208 aaPredicted RBP9.66□□□□□ -0.86
SCAMP4-211ENST00000588907 HERC1Q15751 4861 aa9.6□□□□□ -0.87
SCAMP4-211ENST00000588907 C1orf195Q5TG92 126 aa9.59□□□□□ -0.87
SCAMP4-211ENST00000588907 RETNLBQ9BQ08 111 aa9.58□□□□□ -0.88
SCAMP4-211ENST00000588907 ACYP1P07311 99 aa9.57□□□□□ -0.88
SCAMP4-211ENST00000588907 FAM240AA0A1B0GVK7 77 aa9.56□□□□□ -0.88
SCAMP4-211ENST00000588907 J3KT08 172 aa9.56□□□□□ -0.88
SCAMP4-211ENST00000588907 J3QR89 54 aa9.56□□□□□ -0.88
SCAMP4-211ENST00000588907 PRR4Q16378 134 aa9.56□□□□□ -0.88
SCAMP4-211ENST00000588907 NREPQ16612 68 aa9.56□□□□□ -0.88
SCAMP4-211ENST00000588907 UBL5Q9BZL1 73 aa9.54□□□□□ -0.88
SCAMP4-211ENST00000588907 LINC00472Q9H8W2 130 aa9.54□□□□□ -0.88
SCAMP4-211ENST00000588907 IGLV7-46A0A075B6I9 117 aa9.53□□□□□ -0.88
SCAMP4-211ENST00000588907 Q96NJ1 140 aa9.53□□□□□ -0.88
SCAMP4-211ENST00000588907 IGKV4-1P06312 121 aa9.5□□□□□ -0.89
SCAMP4-211ENST00000588907 LINC00846Q9NV44 126 aa9.5□□□□□ -0.89
SCAMP4-211ENST00000588907 Q6ZVQ6 151 aa9.49□□□□□ -0.89
SCAMP4-211ENST00000588907 SIGMAR1Q99720 223 aa9.49□□□□□ -0.89
SCAMP4-211ENST00000588907 TPRXLQ17RH7 258 aa9.47□□□□□ -0.89
SCAMP4-211ENST00000588907 HMCN2Q8NDA2 5059 aa9.46□□□□□ -0.9
SCAMP4-211ENST00000588907 NDUFB1O75438 58 aa9.45□□□□□ -0.9
SCAMP4-211ENST00000588907 BPY2O14599 106 aa9.44□□□□□ -0.9
SCAMP4-211ENST00000588907 DEFB116Q30KQ4 102 aa9.43□□□□□ -0.9
SCAMP4-211ENST00000588907 A8MWP4 228 aa9.42□□□□□ -0.9
SCAMP4-211ENST00000588907 K7ERU9 68 aa9.42□□□□□ -0.9
SCAMP4-211ENST00000588907 KRTAP13-3Q3SY46 172 aa9.41□□□□□ -0.9
SCAMP4-211ENST00000588907 A0A1B0GVX0 72 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms