RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 TNP2Q05952 138 aa4.99□□□□□ -1.61
LAMA3-210ENST00000588770 SPRR4Q96PI1 79 aa4.99□□□□□ -1.61
LAMA3-210ENST00000588770 MAP1AP78559 2803 aaPredicted RBP4.98□□□□□ -1.61
LAMA3-210ENST00000588770 EPG5Q9HCE0 2579 aa4.98□□□□□ -1.61
LAMA3-210ENST00000588770 A0A1W2PPR1 153 aa4.97□□□□□ -1.61
LAMA3-210ENST00000588770 PLAC8Q9NZF1 115 aa4.97□□□□□ -1.61
LAMA3-210ENST00000588770 Q6ZRX8 168 aa4.96□□□□□ -1.62
LAMA3-210ENST00000588770 A0A1B0GU33 70 aa4.96□□□□□ -1.62
LAMA3-210ENST00000588770 KALRNO60229 2985 aa4.96□□□□□ -1.62
LAMA3-210ENST00000588770 LINC01556Q5JQF7 62 aa4.95□□□□□ -1.62
LAMA3-210ENST00000588770 C19orf73Q9NVV2 129 aa4.95□□□□□ -1.62
LAMA3-210ENST00000588770 A0A0D9SG42 100 aa4.95□□□□□ -1.62
LAMA3-210ENST00000588770 GVQW2A0A096LPI5 108 aaPredicted RBP4.94□□□□□ -1.62
LAMA3-210ENST00000588770 USP24Q9UPU5 2620 aa4.94□□□□□ -1.62
LAMA3-210ENST00000588770 ZFHX3Q15911 3703 aa4.94□□□□□ -1.62
LAMA3-210ENST00000588770 DNAH10OSP0CZ25 163 aa4.93□□□□□ -1.62
LAMA3-210ENST00000588770 NOTCH2NLQ7Z3S9 236 aa4.92□□□□□ -1.62
LAMA3-210ENST00000588770 CHD9Q3L8U1 2897 aa4.92□□□□□ -1.62
LAMA3-210ENST00000588770 ITPR1Q14643 2758 aa4.92□□□□□ -1.62
LAMA3-210ENST00000588770 WDFY4Q6ZS81 3184 aa4.91□□□□□ -1.62
LAMA3-210ENST00000588770 IGFL1Q6UW32 110 aa4.91□□□□□ -1.62
LAMA3-210ENST00000588770 CHD6Q8TD26 2715 aa4.91□□□□□ -1.62
LAMA3-210ENST00000588770 FRYLO94915 3013 aa4.91□□□□□ -1.62
LAMA3-210ENST00000588770 FASNP49327 2511 aaKnown RBP4.91□□□□□ -1.62
LAMA3-210ENST00000588770 KRTAP29-1A8MX34 341 aaPredicted RBP4.9□□□□□ -1.62
LAMA3-210ENST00000588770 LAMA1P25391 3075 aa4.9□□□□□ -1.62
LAMA3-210ENST00000588770 CENPEQ02224 2701 aa4.9□□□□□ -1.63
LAMA3-210ENST00000588770 ZNF861PO60384 105 aa4.89□□□□□ -1.63
LAMA3-210ENST00000588770 SPEGQ15772 3267 aa4.89□□□□□ -1.63
LAMA3-210ENST00000588770 SPENQ96T58 3664 aaKnown RBP4.88□□□□□ -1.63
LAMA3-210ENST00000588770 SMR3AQ99954 134 aa4.88□□□□□ -1.63
LAMA3-210ENST00000588770 TYMSOSQ8TAI1 123 aa4.88□□□□□ -1.63
LAMA3-210ENST00000588770 C20orf166-AS1Q96NR2 134 aa4.88□□□□□ -1.63
LAMA3-210ENST00000588770 FAM168BA1KXE4 195 aa4.87□□□□□ -1.63
LAMA3-210ENST00000588770 TACC2O95359 2948 aa4.86□□□□□ -1.63
LAMA3-210ENST00000588770 A8MUU9 505 aa4.86□□□□□ -1.63
LAMA3-210ENST00000588770 GCN1Q92616 2671 aaKnown RBP4.86□□□□□ -1.63
LAMA3-210ENST00000588770 SPACA4Q8TDM5 124 aa4.86□□□□□ -1.63
LAMA3-210ENST00000588770 DMBT1Q9UGM3 2413 aaPredicted RBP4.86□□□□□ -1.63
LAMA3-210ENST00000588770 A0A1B0GVX0 72 aa4.85□□□□□ -1.63
LAMA3-210ENST00000588770 UNC79Q9P2D8 2635 aa4.85□□□□□ -1.63
LAMA3-210ENST00000588770 Q96NJ1 140 aa4.84□□□□□ -1.64
LAMA3-210ENST00000588770 MMP24-AS1A0A0U1RRL7 71 aa4.83□□□□□ -1.64
LAMA3-210ENST00000588770 M0R2T5 61 aa4.83□□□□□ -1.64
LAMA3-210ENST00000588770 NBEAL2Q6ZNJ1 2754 aa4.83□□□□□ -1.64
LAMA3-210ENST00000588770 LRBAP50851 2863 aa4.83□□□□□ -1.64
LAMA3-210ENST00000588770 CASC10Q5T4H9 136 aa4.83□□□□□ -1.64
LAMA3-210ENST00000588770 ASH1LQ9NR48 2969 aaKnown RBP4.83□□□□□ -1.64
LAMA3-210ENST00000588770 KRTAP24-1Q3LI83 254 aa4.82□□□□□ -1.64
LAMA3-210ENST00000588770 NBDYA0A0U1RRE5 68 aa4.82□□□□□ -1.64
LAMA3-210ENST00000588770 CFAP47Q6ZTR5 3102 aa4.81□□□□□ -1.64
LAMA3-210ENST00000588770 RPL37P61927 97 aaKnown RBP4.79□□□□□ -1.64
LAMA3-210ENST00000588770 P0C880 135 aa4.79□□□□□ -1.64
LAMA3-210ENST00000588770 KRTAP10-9P60411 292 aa4.79□□□□□ -1.64
LAMA3-210ENST00000588770 GIG44P09565 113 aaPredicted RBP4.79□□□□□ -1.64
LAMA3-210ENST00000588770 NOTCH1P46531 2555 aa4.78□□□□□ -1.64
LAMA3-210ENST00000588770 H1FX-AS1Q4G0G2 97 aa4.78□□□□□ -1.64
LAMA3-210ENST00000588770 HELZ2Q9BYK8 2649 aaKnown RBP4.78□□□□□ -1.64
LAMA3-210ENST00000588770 PRR34Q9NV39 138 aa4.78□□□□□ -1.64
LAMA3-210ENST00000588770 H3BNG1 76 aa4.77□□□□□ -1.65
LAMA3-210ENST00000588770 PLAC4Q8WY50 150 aa4.77□□□□□ -1.65
LAMA3-210ENST00000588770 C15orf56Q8N910 161 aa4.77□□□□□ -1.65
LAMA3-210ENST00000588770 ASPMQ8IZT6 3477 aa4.76□□□□□ -1.65
LAMA3-210ENST00000588770 ADGRG4Q8IZF6 3080 aa4.76□□□□□ -1.65
LAMA3-210ENST00000588770 ZFHX4Q86UP3 3567 aa4.76□□□□□ -1.65
LAMA3-210ENST00000588770 LINC00472Q9H8W2 130 aa4.76□□□□□ -1.65
LAMA3-210ENST00000588770 DMXL2Q8TDJ6 3036 aa4.75□□□□□ -1.65
LAMA3-210ENST00000588770 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.75□□□□□ -1.65
LAMA3-210ENST00000588770 DMXL1Q9Y485 3027 aa4.74□□□□□ -1.65
LAMA3-210ENST00000588770 PSORS1C2Q9UIG4 136 aa4.74□□□□□ -1.65
LAMA3-210ENST00000588770 BAHCC1Q9P281 2608 aa4.73□□□□□ -1.65
LAMA3-210ENST00000588770 LINC00304Q8N9R0 145 aa4.72□□□□□ -1.65
LAMA3-210ENST00000588770 Q8N1X5 172 aa4.72□□□□□ -1.65
LAMA3-210ENST00000588770 DCHS1Q96JQ0 3298 aa4.72□□□□□ -1.65
LAMA3-210ENST00000588770 BOD1L1Q8NFC6 3051 aa4.71□□□□□ -1.66
LAMA3-210ENST00000588770 ZZEF1O43149 2961 aa4.7□□□□□ -1.66
LAMA3-210ENST00000588770 ATRQ13535 2644 aa4.69□□□□□ -1.66
LAMA3-210ENST00000588770 Q5W150 140 aa4.69□□□□□ -1.66
LAMA3-210ENST00000588770 COL6A5A8TX70 2615 aa4.69□□□□□ -1.66
LAMA3-210ENST00000588770 PP632Q6XCG6 107 aa4.69□□□□□ -1.66
LAMA3-210ENST00000588770 Q6ZSA8 131 aa4.69□□□□□ -1.66
LAMA3-210ENST00000588770 TEX15Q9BXT5 2789 aa4.68□□□□□ -1.66
LAMA3-210ENST00000588770 KRTAP26-1Q6PEX3 210 aa4.68□□□□□ -1.66
LAMA3-210ENST00000588770 SPRR1AP35321 89 aa4.68□□□□□ -1.66
LAMA3-210ENST00000588770 FLNBO75369 2602 aaKnown RBP4.67□□□□□ -1.66
LAMA3-210ENST00000588770 BSNQ9UPA5 3926 aa4.67□□□□□ -1.66
LAMA3-210ENST00000588770 MGAM2Q2M2H8 2515 aa4.67□□□□□ -1.66
LAMA3-210ENST00000588770 NBEAL1Q6ZS30 2694 aa4.67□□□□□ -1.66
LAMA3-210ENST00000588770 KRTAP11-1Q8IUC1 163 aa4.67□□□□□ -1.66
LAMA3-210ENST00000588770 ATMQ13315 3056 aa4.67□□□□□ -1.66
LAMA3-210ENST00000588770 K7EIL1 84 aa4.66□□□□□ -1.66
LAMA3-210ENST00000588770 COL12A1Q99715 3063 aa4.66□□□□□ -1.66
LAMA3-210ENST00000588770 FLNAP21333 2647 aaKnown RBP4.65□□□□□ -1.67
LAMA3-210ENST00000588770 ANAPC11Q9NYG5 84 aa4.64□□□□□ -1.67
LAMA3-210ENST00000588770 KRTAP4-16G5E9R7 235 aaPredicted RBP4.63□□□□□ -1.67
LAMA3-210ENST00000588770 ITPR3Q14573 2671 aa4.63□□□□□ -1.67
LAMA3-210ENST00000588770 LAMA5O15230 3695 aa4.62□□□□□ -1.67
LAMA3-210ENST00000588770 PANO1I0J062 215 aa4.62□□□□□ -1.67
LAMA3-210ENST00000588770 A0A087WTM6 91 aa4.61□□□□□ -1.67
LAMA3-210ENST00000588770 HECTD1Q9ULT8 2610 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms