RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 EPPK1P58107 5090 aaKnown RBP15.72■□□□□ 0.11
SCAMP4-210ENST00000588555 ZNF706Q9Y5V0 76 aaPredicted RBP15.7■□□□□ 0.1
SCAMP4-210ENST00000588555 J3QR89 54 aa15.7■□□□□ 0.1
SCAMP4-210ENST00000588555 LINC00483Q53H64 154 aa15.7■□□□□ 0.1
SCAMP4-210ENST00000588555 RPL37AP61513 92 aaKnown RBP15.69■□□□□ 0.1
SCAMP4-210ENST00000588555 TRBV7-4A0A0J9YYF1 115 aa15.68■□□□□ 0.1
SCAMP4-210ENST00000588555 LOC110117498A0A087WWA1 95 aa15.67■□□□□ 0.1
SCAMP4-210ENST00000588555 DSCR8Q96T75 97 aa15.65■□□□□ 0.1
SCAMP4-210ENST00000588555 HSPG2P98160 4391 aa15.65■□□□□ 0.1
SCAMP4-210ENST00000588555 Q6ZQT0 140 aa15.64■□□□□ 0.1
SCAMP4-210ENST00000588555 CDK2AP2O75956 126 aa15.64■□□□□ 0.09
SCAMP4-210ENST00000588555 KRTAP10-4P60372 401 aaPredicted RBP15.62■□□□□ 0.09
SCAMP4-210ENST00000588555 IGLV8-61A0A075B6I0 122 aa15.61■□□□□ 0.09
SCAMP4-210ENST00000588555 F8WEM9 126 aa15.61■□□□□ 0.09
SCAMP4-210ENST00000588555 CCKP06307 115 aa15.61■□□□□ 0.09
SCAMP4-210ENST00000588555 RYR1P21817 5038 aa15.6■□□□□ 0.09
SCAMP4-210ENST00000588555 PDE6GP18545 87 aa15.59■□□□□ 0.09
SCAMP4-210ENST00000588555 ANAPC11Q9NYG5 84 aa15.59■□□□□ 0.09
SCAMP4-210ENST00000588555 FAM240AA0A1B0GVK7 77 aa15.57■□□□□ 0.08
SCAMP4-210ENST00000588555 KIAA1109Q2LD37 5005 aa15.53■□□□□ 0.08
SCAMP4-210ENST00000588555 SPINK6Q6UWN8 80 aa15.52■□□□□ 0.08
SCAMP4-210ENST00000588555 IGFL1Q6UW32 110 aa15.52■□□□□ 0.07
SCAMP4-210ENST00000588555 ACYP1P07311 99 aa15.5■□□□□ 0.07
SCAMP4-210ENST00000588555 IGLV9-49A0A0B4J1Y8 123 aa15.49■□□□□ 0.07
SCAMP4-210ENST00000588555 KRTAP1-4P0C5Y4 121 aa15.49■□□□□ 0.07
SCAMP4-210ENST00000588555 A0A0G2JQZ4 141 aa15.49■□□□□ 0.07
SCAMP4-210ENST00000588555 VPS25Q9BRG1 176 aa15.49■□□□□ 0.07
SCAMP4-210ENST00000588555 A0A1W2PNM2 257 aa15.48■□□□□ 0.07
SCAMP4-210ENST00000588555 C21orf62-AS1Q17RA5 79 aa15.48■□□□□ 0.07
SCAMP4-210ENST00000588555 Q6JHZ5 121 aa15.47■□□□□ 0.07
SCAMP4-210ENST00000588555 CDIP1Q9H305 208 aa15.47■□□□□ 0.07
SCAMP4-210ENST00000588555 Q8NBF4 154 aa15.45■□□□□ 0.06
SCAMP4-210ENST00000588555 FAM229AH3BQW9 127 aa15.44■□□□□ 0.06
SCAMP4-210ENST00000588555 C9orf153Q5TBE3 101 aa15.44■□□□□ 0.06
SCAMP4-210ENST00000588555 FAM229BQ4G0N7 80 aa15.44■□□□□ 0.06
SCAMP4-210ENST00000588555 LINC00846Q9NV44 126 aa15.44■□□□□ 0.06
SCAMP4-210ENST00000588555 A0A087X002 238 aa15.42■□□□□ 0.06
SCAMP4-210ENST00000588555 PLA2G1BP04054 148 aaKnown RBP15.42■□□□□ 0.06
SCAMP4-210ENST00000588555 MOBPQ13875 183 aa15.42■□□□□ 0.06
SCAMP4-210ENST00000588555 KRTAP17-1Q9BYP8 105 aa15.4■□□□□ 0.06
SCAMP4-210ENST00000588555 PKHD1L1Q86WI1 4243 aa15.39■□□□□ 0.06
SCAMP4-210ENST00000588555 Q5VSD8 79 aa15.39■□□□□ 0.05
SCAMP4-210ENST00000588555 KRTAP13-2Q52LG2 175 aa15.37■□□□□ 0.05
SCAMP4-210ENST00000588555 CRYGAP11844 174 aa15.36■□□□□ 0.05
SCAMP4-210ENST00000588555 A0A1B0GW54 56 aa15.35■□□□□ 0.05
SCAMP4-210ENST00000588555 Q6Q795 121 aa15.34■□□□□ 0.05
SCAMP4-210ENST00000588555 SSBP3-AS1Q7Z2R9 100 aa15.31■□□□□ 0.04
SCAMP4-210ENST00000588555 Q8N1X5 172 aa15.28■□□□□ 0.04
SCAMP4-210ENST00000588555 UBL5Q9BZL1 73 aa15.27■□□□□ 0.04
SCAMP4-210ENST00000588555 Q6ZVQ6 151 aa15.26■□□□□ 0.03
SCAMP4-210ENST00000588555 A0A087WSZ3 146 aa15.24■□□□□ 0.03
SCAMP4-210ENST00000588555 LINC00643Q86TS7 51 aa15.24■□□□□ 0.03
SCAMP4-210ENST00000588555 TRBV7-7A0A0K0K1E9 115 aa15.23■□□□□ 0.03
SCAMP4-210ENST00000588555 PRR26Q8N8Z3 221 aa15.21■□□□□ 0.03
SCAMP4-210ENST00000588555 HRCT1Q6UXD1 115 aa15.21■□□□□ 0.02
SCAMP4-210ENST00000588555 MT-ATP8P03928 68 aa15.19■□□□□ 0.02
SCAMP4-210ENST00000588555 NREPQ16612 68 aa15.19■□□□□ 0.02
SCAMP4-210ENST00000588555 CD164Q04900 197 aa15.18■□□□□ 0.02
SCAMP4-210ENST00000588555 TYMSOSQ8TAI1 123 aa15.18■□□□□ 0.02
SCAMP4-210ENST00000588555 BIRC6Q9NR09 4857 aa15.16■□□□□ 0.02
SCAMP4-210ENST00000588555 SIGMAR1Q99720 223 aa15.13■□□□□ 0.01
SCAMP4-210ENST00000588555 LRP1Q07954 4544 aaKnown RBP15.13■□□□□ 0.01
SCAMP4-210ENST00000588555 IGKV3D-7A0A0C4DH55 119 aa15.09■□□□□ 0.01
SCAMP4-210ENST00000588555 ATP5EP2Q5VTU8 51 aa15.09■□□□□ 0.01
SCAMP4-210ENST00000588555 FAT3Q8TDW7 4589 aa15.06■□□□□ 0
SCAMP4-210ENST00000588555 SS18L2Q9UHA2 77 aa15.06■□□□□ 0
SCAMP4-210ENST00000588555 CXCL6P80162 114 aa15.05■□□□□ -0
SCAMP4-210ENST00000588555 LINC00472Q9H8W2 130 aa15.04■□□□□ -0
SCAMP4-210ENST00000588555 BPY2O14599 106 aa15.02□□□□□ -0.01
SCAMP4-210ENST00000588555 LINC00304Q8N9R0 145 aa15.01□□□□□ -0.01
SCAMP4-210ENST00000588555 Q96NJ1 140 aa15.01□□□□□ -0.01
SCAMP4-210ENST00000588555 FLG2Q5D862 2391 aaPredicted RBP15.01□□□□□ -0.01
SCAMP4-210ENST00000588555 MYCBP2O75592 4640 aa15.01□□□□□ -0.01
SCAMP4-210ENST00000588555 TNXBP22105 4242 aa15.01□□□□□ -0.01
SCAMP4-210ENST00000588555 DEFB116Q30KQ4 102 aa14.99□□□□□ -0.01
SCAMP4-210ENST00000588555 Q5XG85 94 aa14.99□□□□□ -0.01
SCAMP4-210ENST00000588555 KRTAP4-5Q9BYR2 181 aa14.99□□□□□ -0.01
SCAMP4-210ENST00000588555 HERC2O95714 4834 aa14.98□□□□□ -0.01
SCAMP4-210ENST00000588555 C4orf48Q5BLP8 95 aa14.98□□□□□ -0.01
SCAMP4-210ENST00000588555 SPINK1P00995 79 aa14.97□□□□□ -0.01
SCAMP4-210ENST00000588555 IMUPQ9GZP8 106 aa14.97□□□□□ -0.01
SCAMP4-210ENST00000588555 KRTAP10-8P60410 259 aa14.96□□□□□ -0.01
SCAMP4-210ENST00000588555 ASB16-AS1Q495Z4 193 aa14.96□□□□□ -0.02
SCAMP4-210ENST00000588555 DSCR10P59022 87 aa14.95□□□□□ -0.02
SCAMP4-210ENST00000588555 SPAG11AQ6PDA7 123 aa14.95□□□□□ -0.02
SCAMP4-210ENST00000588555 RPS29P62273 56 aaKnown RBP14.91□□□□□ -0.02
SCAMP4-210ENST00000588555 Q8N9L7 120 aa14.91□□□□□ -0.02
SCAMP4-210ENST00000588555 LIMD2Q9BT23 127 aa14.91□□□□□ -0.02
SCAMP4-210ENST00000588555 HIST1H4AP62805 103 aaKnown RBP14.88□□□□□ -0.03
SCAMP4-210ENST00000588555 J3KT08 172 aa14.88□□□□□ -0.03
SCAMP4-210ENST00000588555 A0A087WVE0 104 aa14.87□□□□□ -0.03
SCAMP4-210ENST00000588555 IGKV4-1P06312 121 aa14.87□□□□□ -0.03
SCAMP4-210ENST00000588555 K7EQZ3 153 aa14.85□□□□□ -0.03
SCAMP4-210ENST00000588555 ABCA13Q86UQ4 5058 aa14.84□□□□□ -0.03
SCAMP4-210ENST00000588555 C1orf195Q5TG92 126 aa14.83□□□□□ -0.03
SCAMP4-210ENST00000588555 MT1HL1P0DM35 61 aa14.83□□□□□ -0.04
SCAMP4-210ENST00000588555 A8MWP4 228 aa14.82□□□□□ -0.04
SCAMP4-210ENST00000588555 PRR15Q8IV56 129 aa14.77□□□□□ -0.05
SCAMP4-210ENST00000588555 OXTP01178 125 aa14.76□□□□□ -0.05
SCAMP4-210ENST00000588555 SCGB1A1P11684 91 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms