RNA–Protein interactions for RNA: ENST00000588289.1

TMED1-204, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2 BASIC

Gene TMED1, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-204ENST00000588289 FAT2Q9NYQ8 4349 aa7.78□□□□□ -1.16
TMED1-204ENST00000588289 A0A1B0GW54 56 aa7.78□□□□□ -1.16
TMED1-204ENST00000588289 RPL37AP61513 92 aaKnown RBP7.78□□□□□ -1.16
TMED1-204ENST00000588289 Q6JHZ5 121 aa7.78□□□□□ -1.16
TMED1-204ENST00000588289 KRTAP4-5Q9BYR2 181 aa7.78□□□□□ -1.16
TMED1-204ENST00000588289 PKD1P98161 4303 aa7.77□□□□□ -1.16
TMED1-204ENST00000588289 CCKP06307 115 aa7.77□□□□□ -1.17
TMED1-204ENST00000588289 DNAH11Q96DT5 4516 aa7.76□□□□□ -1.17
TMED1-204ENST00000588289 A0A1B0GV72 72 aa7.76□□□□□ -1.17
TMED1-204ENST00000588289 LINC01547P58512 204 aaPredicted RBP7.76□□□□□ -1.17
TMED1-204ENST00000588289 SPRR4Q96PI1 79 aa7.76□□□□□ -1.17
TMED1-204ENST00000588289 VPS25Q9BRG1 176 aa7.76□□□□□ -1.17
TMED1-204ENST00000588289 HSPG2P98160 4391 aa7.76□□□□□ -1.17
TMED1-204ENST00000588289 DNAH5Q8TE73 4624 aa7.75□□□□□ -1.17
TMED1-204ENST00000588289 TRBV7-4A0A0J9YYF1 115 aa7.74□□□□□ -1.17
TMED1-204ENST00000588289 PLA2G1BP04054 148 aaKnown RBP7.74□□□□□ -1.17
TMED1-204ENST00000588289 FAM229AH3BQW9 127 aa7.73□□□□□ -1.17
TMED1-204ENST00000588289 LINC00483Q53H64 154 aa7.73□□□□□ -1.17
TMED1-204ENST00000588289 Q6ZQT0 140 aa7.73□□□□□ -1.17
TMED1-204ENST00000588289 CDK2AP2O75956 126 aa7.72□□□□□ -1.17
TMED1-204ENST00000588289 HAMPP81172 84 aa7.72□□□□□ -1.17
TMED1-204ENST00000588289 C9orf153Q5TBE3 101 aa7.72□□□□□ -1.17
TMED1-204ENST00000588289 SPINK6Q6UWN8 80 aa7.72□□□□□ -1.17
TMED1-204ENST00000588289 UBL5Q9BZL1 73 aa7.72□□□□□ -1.17
TMED1-204ENST00000588289 DNAH8Q96JB1 4490 aa7.72□□□□□ -1.17
TMED1-204ENST00000588289 IGLV8-61A0A075B6I0 122 aa7.71□□□□□ -1.18
TMED1-204ENST00000588289 FAM229BQ4G0N7 80 aa7.7□□□□□ -1.18
TMED1-204ENST00000588289 C3orf22Q8N5N4 141 aa7.7□□□□□ -1.18
TMED1-204ENST00000588289 Q8NBF4 154 aa7.7□□□□□ -1.18
TMED1-204ENST00000588289 XGP55808 180 aa7.69□□□□□ -1.18
TMED1-204ENST00000588289 SMIM29Q86T20 159 aa7.69□□□□□ -1.18
TMED1-204ENST00000588289 IGLV9-49A0A0B4J1Y8 123 aa7.67□□□□□ -1.18
TMED1-204ENST00000588289 ATP5EP2Q5VTU8 51 aa7.67□□□□□ -1.18
TMED1-204ENST00000588289 CRYGAP11844 174 aa7.65□□□□□ -1.18
TMED1-204ENST00000588289 LINC00643Q86TS7 51 aa7.65□□□□□ -1.18
TMED1-204ENST00000588289 SMR3BP02814 79 aaPredicted RBP7.64□□□□□ -1.19
TMED1-204ENST00000588289 Q6Q795 121 aa7.64□□□□□ -1.19
TMED1-204ENST00000588289 IGFL1Q6UW32 110 aa7.64□□□□□ -1.19
TMED1-204ENST00000588289 SSBP3-AS1Q7Z2R9 100 aa7.64□□□□□ -1.19
TMED1-204ENST00000588289 MOBPQ13875 183 aa7.63□□□□□ -1.19
TMED1-204ENST00000588289 NREPQ16612 68 aa7.63□□□□□ -1.19
TMED1-204ENST00000588289 SS18L2Q9UHA2 77 aa7.63□□□□□ -1.19
TMED1-204ENST00000588289 SIGMAR1Q99720 223 aa7.62□□□□□ -1.19
TMED1-204ENST00000588289 LINC00846Q9NV44 126 aa7.61□□□□□ -1.19
TMED1-204ENST00000588289 CD164Q04900 197 aa7.59□□□□□ -1.19
TMED1-204ENST00000588289 CDIP1Q9H305 208 aa7.59□□□□□ -1.19
TMED1-204ENST00000588289 LRP1BQ9NZR2 4599 aa7.58□□□□□ -1.2
TMED1-204ENST00000588289 TRBV7-7A0A0K0K1E9 115 aa7.58□□□□□ -1.2
TMED1-204ENST00000588289 A0A1W2PNM2 257 aa7.58□□□□□ -1.2
TMED1-204ENST00000588289 C4orf48Q5BLP8 95 aa7.58□□□□□ -1.2
TMED1-204ENST00000588289 Q6ZVQ6 151 aa7.57□□□□□ -1.2
TMED1-204ENST00000588289 CXCL6P80162 114 aa7.56□□□□□ -1.2
TMED1-204ENST00000588289 IMUPQ9GZP8 106 aa7.56□□□□□ -1.2
TMED1-204ENST00000588289 A0A087WSZ3 146 aa7.55□□□□□ -1.2
TMED1-204ENST00000588289 Q5VSD8 79 aa7.55□□□□□ -1.2
TMED1-204ENST00000588289 TYMSOSQ8TAI1 123 aa7.55□□□□□ -1.2
TMED1-204ENST00000588289 SRRM2Q9UQ35 2752 aaKnown RBP7.54□□□□□ -1.2
TMED1-204ENST00000588289 BPY2O14599 106 aa7.54□□□□□ -1.2
TMED1-204ENST00000588289 LIMD2Q9BT23 127 aa7.54□□□□□ -1.2
TMED1-204ENST00000588289 ANAPC11Q9NYG5 84 aa7.54□□□□□ -1.2
TMED1-204ENST00000588289 APOBP04114 4563 aaKnown RBP7.53□□□□□ -1.2
TMED1-204ENST00000588289 J3KT08 172 aa7.53□□□□□ -1.2
TMED1-204ENST00000588289 SPAG11AQ6PDA7 123 aa7.53□□□□□ -1.2
TMED1-204ENST00000588289 KRTAP1-4P0C5Y4 121 aa7.51□□□□□ -1.21
TMED1-204ENST00000588289 Q8N1X5 172 aa7.5□□□□□ -1.21
TMED1-204ENST00000588289 VPS13BQ7Z7G8 4022 aa7.5□□□□□ -1.21
TMED1-204ENST00000588289 DMBT1Q9UGM3 2413 aaPredicted RBP7.5□□□□□ -1.21
TMED1-204ENST00000588289 A0A087X002 238 aa7.49□□□□□ -1.21
TMED1-204ENST00000588289 MT-ATP8P03928 68 aa7.49□□□□□ -1.21
TMED1-204ENST00000588289 HIST1H4AP62805 103 aaKnown RBP7.49□□□□□ -1.21
TMED1-204ENST00000588289 HRCT1Q6UXD1 115 aa7.49□□□□□ -1.21
TMED1-204ENST00000588289 SPINK1P00995 79 aa7.48□□□□□ -1.21
TMED1-204ENST00000588289 SCGB1A1P11684 91 aa7.48□□□□□ -1.21
TMED1-204ENST00000588289 IGKV3D-7A0A0C4DH55 119 aa7.47□□□□□ -1.21
TMED1-204ENST00000588289 NDUFB1O75438 58 aa7.47□□□□□ -1.21
TMED1-204ENST00000588289 KRTAP10-4P60372 401 aaPredicted RBP7.47□□□□□ -1.21
TMED1-204ENST00000588289 A0A0G2JQZ4 141 aa7.46□□□□□ -1.22
TMED1-204ENST00000588289 RPS29P62273 56 aaKnown RBP7.46□□□□□ -1.22
TMED1-204ENST00000588289 KRTAP13-2Q52LG2 175 aa7.46□□□□□ -1.22
TMED1-204ENST00000588289 LINC00304Q8N9R0 145 aa7.46□□□□□ -1.22
TMED1-204ENST00000588289 ASB16-AS1Q495Z4 193 aa7.44□□□□□ -1.22
TMED1-204ENST00000588289 Q5XG85 94 aa7.44□□□□□ -1.22
TMED1-204ENST00000588289 MYCBP2O75592 4640 aa7.43□□□□□ -1.22
TMED1-204ENST00000588289 PRR26Q8N8Z3 221 aa7.43□□□□□ -1.22
TMED1-204ENST00000588289 IGKV4-1P06312 121 aa7.4□□□□□ -1.22
TMED1-204ENST00000588289 A8MWP4 228 aa7.39□□□□□ -1.23
TMED1-204ENST00000588289 LINC00472Q9H8W2 130 aa7.39□□□□□ -1.23
TMED1-204ENST00000588289 FAT1Q14517 4588 aa7.38□□□□□ -1.23
TMED1-204ENST00000588289 HMCN2Q8NDA2 5059 aa7.37□□□□□ -1.23
TMED1-204ENST00000588289 FAM236AA0A1B0GUQ0 79 aa7.36□□□□□ -1.23
TMED1-204ENST00000588289 FAM236BA0A1B0GV22 79 aa7.36□□□□□ -1.23
TMED1-204ENST00000588289 ATOX1O00244 68 aa7.36□□□□□ -1.23
TMED1-204ENST00000588289 SMIM20Q8N5G0 67 aa7.36□□□□□ -1.23
TMED1-204ENST00000588289 OXTP01178 125 aa7.34□□□□□ -1.23
TMED1-204ENST00000588289 PRR15Q8IV56 129 aa7.34□□□□□ -1.23
TMED1-204ENST00000588289 DSCR10P59022 87 aa7.33□□□□□ -1.24
TMED1-204ENST00000588289 DEFB116Q30KQ4 102 aa7.33□□□□□ -1.24
TMED1-204ENST00000588289 PKHD1L1Q86WI1 4243 aa7.33□□□□□ -1.24
TMED1-204ENST00000588289 HCG22E2RYF7 251 aa7.32□□□□□ -1.24
TMED1-204ENST00000588289 K7EQZ3 153 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms