RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 ERC2-IT1O76042 136 aa6.47□□□□□ -1.37
CHMP1B-202ENST00000588284 NDUFV3P56181 108 aaKnown RBP6.47□□□□□ -1.37
CHMP1B-202ENST00000588284 KRTAP13-1Q8IUC0 172 aa6.47□□□□□ -1.37
CHMP1B-202ENST00000588284 OBSCN-AS1Q96MR7 158 aa6.47□□□□□ -1.37
CHMP1B-202ENST00000588284 PDE6GP18545 87 aa6.46□□□□□ -1.38
CHMP1B-202ENST00000588284 RBM3P98179 157 aaKnown RBP6.46□□□□□ -1.38
CHMP1B-202ENST00000588284 C21orf62-AS1Q17RA5 79 aa6.46□□□□□ -1.38
CHMP1B-202ENST00000588284 Q8N377 158 aa6.46□□□□□ -1.38
CHMP1B-202ENST00000588284 IGLV7-43P04211 117 aa6.45□□□□□ -1.38
CHMP1B-202ENST00000588284 LINC01547P58512 204 aaPredicted RBP6.45□□□□□ -1.38
CHMP1B-202ENST00000588284 ST20-AS1Q8NBB2 130 aa6.45□□□□□ -1.38
CHMP1B-202ENST00000588284 ZNF706Q9Y5V0 76 aaPredicted RBP6.45□□□□□ -1.38
CHMP1B-202ENST00000588284 DSCR8Q96T75 97 aa6.44□□□□□ -1.38
CHMP1B-202ENST00000588284 PLA2G1BP04054 148 aaKnown RBP6.43□□□□□ -1.38
CHMP1B-202ENST00000588284 SPRR1BP22528 89 aa6.43□□□□□ -1.38
CHMP1B-202ENST00000588284 DNAH11Q96DT5 4516 aa6.43□□□□□ -1.38
CHMP1B-202ENST00000588284 ACYP1P07311 99 aa6.42□□□□□ -1.38
CHMP1B-202ENST00000588284 KRTAP19-4Q3LI73 84 aa6.42□□□□□ -1.38
CHMP1B-202ENST00000588284 F8WEM9 126 aa6.41□□□□□ -1.38
CHMP1B-202ENST00000588284 GAGE2AQ6NT46 116 aa6.41□□□□□ -1.38
CHMP1B-202ENST00000588284 C14orf132Q9NPU4 83 aa6.41□□□□□ -1.38
CHMP1B-202ENST00000588284 FAT2Q9NYQ8 4349 aa6.4□□□□□ -1.38
CHMP1B-202ENST00000588284 LOC110117498A0A087WWA1 95 aa6.4□□□□□ -1.38
CHMP1B-202ENST00000588284 CCKP06307 115 aa6.4□□□□□ -1.38
CHMP1B-202ENST00000588284 XGP55808 180 aa6.4□□□□□ -1.38
CHMP1B-202ENST00000588284 FAM240AA0A1B0GVK7 77 aa6.39□□□□□ -1.39
CHMP1B-202ENST00000588284 HAMPP81172 84 aa6.39□□□□□ -1.39
CHMP1B-202ENST00000588284 SMIM29Q86T20 159 aa6.39□□□□□ -1.39
CHMP1B-202ENST00000588284 SPRR4Q96PI1 79 aa6.39□□□□□ -1.39
CHMP1B-202ENST00000588284 TRBV7-4A0A0J9YYF1 115 aa6.38□□□□□ -1.39
CHMP1B-202ENST00000588284 HECTD4Q9Y4D8 3996 aa6.38□□□□□ -1.39
CHMP1B-202ENST00000588284 DNAH8Q96JB1 4490 aa6.37□□□□□ -1.39
CHMP1B-202ENST00000588284 PKD1P98161 4303 aa6.37□□□□□ -1.39
CHMP1B-202ENST00000588284 A0A1B0GV72 72 aa6.37□□□□□ -1.39
CHMP1B-202ENST00000588284 RPL37AP61513 92 aaKnown RBP6.37□□□□□ -1.39
CHMP1B-202ENST00000588284 LINC00483Q53H64 154 aa6.37□□□□□ -1.39
CHMP1B-202ENST00000588284 Q6ZQT0 140 aa6.37□□□□□ -1.39
CHMP1B-202ENST00000588284 IGLV8-61A0A075B6I0 122 aa6.36□□□□□ -1.39
CHMP1B-202ENST00000588284 A0A1B0GW54 56 aa6.36□□□□□ -1.39
CHMP1B-202ENST00000588284 Q6JHZ5 121 aa6.36□□□□□ -1.39
CHMP1B-202ENST00000588284 DNAH5Q8TE73 4624 aa6.36□□□□□ -1.39
CHMP1B-202ENST00000588284 C3orf22Q8N5N4 141 aa6.35□□□□□ -1.39
CHMP1B-202ENST00000588284 KIAA1109Q2LD37 5005 aa6.33□□□□□ -1.4
CHMP1B-202ENST00000588284 CDK2AP2O75956 126 aa6.33□□□□□ -1.4
CHMP1B-202ENST00000588284 SMR3BP02814 79 aaPredicted RBP6.33□□□□□ -1.4
CHMP1B-202ENST00000588284 SPINK6Q6UWN8 80 aa6.33□□□□□ -1.4
CHMP1B-202ENST00000588284 VPS25Q9BRG1 176 aa6.33□□□□□ -1.4
CHMP1B-202ENST00000588284 FAM229BQ4G0N7 80 aa6.3□□□□□ -1.4
CHMP1B-202ENST00000588284 IGFL1Q6UW32 110 aa6.3□□□□□ -1.4
CHMP1B-202ENST00000588284 IGLV9-49A0A0B4J1Y8 123 aa6.29□□□□□ -1.4
CHMP1B-202ENST00000588284 C9orf153Q5TBE3 101 aa6.29□□□□□ -1.4
CHMP1B-202ENST00000588284 SSBP3-AS1Q7Z2R9 100 aa6.29□□□□□ -1.4
CHMP1B-202ENST00000588284 Q8NBF4 154 aa6.29□□□□□ -1.4
CHMP1B-202ENST00000588284 UBL5Q9BZL1 73 aa6.29□□□□□ -1.4
CHMP1B-202ENST00000588284 A0A1W2PNM2 257 aa6.28□□□□□ -1.4
CHMP1B-202ENST00000588284 LINC00643Q86TS7 51 aa6.28□□□□□ -1.4
CHMP1B-202ENST00000588284 LINC00846Q9NV44 126 aa6.28□□□□□ -1.4
CHMP1B-202ENST00000588284 DYNC1H1Q14204 4646 aaKnown RBP6.27□□□□□ -1.41
CHMP1B-202ENST00000588284 CRYGAP11844 174 aa6.27□□□□□ -1.41
CHMP1B-202ENST00000588284 Q6Q795 121 aa6.27□□□□□ -1.41
CHMP1B-202ENST00000588284 ANAPC11Q9NYG5 84 aa6.27□□□□□ -1.41
CHMP1B-202ENST00000588284 SIGMAR1Q99720 223 aa6.26□□□□□ -1.41
CHMP1B-202ENST00000588284 LRP1BQ9NZR2 4599 aa6.25□□□□□ -1.41
CHMP1B-202ENST00000588284 MOBPQ13875 183 aa6.25□□□□□ -1.41
CHMP1B-202ENST00000588284 NREPQ16612 68 aa6.25□□□□□ -1.41
CHMP1B-202ENST00000588284 KRTAP4-7Q9BYR0 210 aa6.25□□□□□ -1.41
CHMP1B-202ENST00000588284 LCE1DQ5T752 114 aa6.24□□□□□ -1.41
CHMP1B-202ENST00000588284 TRBV7-7A0A0K0K1E9 115 aa6.23□□□□□ -1.41
CHMP1B-202ENST00000588284 KRTAP10-4P60372 401 aaPredicted RBP6.23□□□□□ -1.41
CHMP1B-202ENST00000588284 PKHD1P08F94 4074 aa6.22□□□□□ -1.41
CHMP1B-202ENST00000588284 KRTAP1-4P0C5Y4 121 aa6.22□□□□□ -1.41
CHMP1B-202ENST00000588284 CD164Q04900 197 aa6.22□□□□□ -1.41
CHMP1B-202ENST00000588284 ATP5EP2Q5VTU8 51 aa6.22□□□□□ -1.41
CHMP1B-202ENST00000588284 Q6ZVQ6 151 aa6.22□□□□□ -1.41
CHMP1B-202ENST00000588284 A0A0G2JQZ4 141 aa6.21□□□□□ -1.42
CHMP1B-202ENST00000588284 ABCA13Q86UQ4 5058 aa6.21□□□□□ -1.42
CHMP1B-202ENST00000588284 A0A087WSZ3 146 aa6.2□□□□□ -1.42
CHMP1B-202ENST00000588284 IMUPQ9GZP8 106 aa6.2□□□□□ -1.42
CHMP1B-202ENST00000588284 A0A087X002 238 aa6.19□□□□□ -1.42
CHMP1B-202ENST00000588284 Q5VSD8 79 aa6.19□□□□□ -1.42
CHMP1B-202ENST00000588284 TYMSOSQ8TAI1 123 aa6.19□□□□□ -1.42
CHMP1B-202ENST00000588284 SS18L2Q9UHA2 77 aa6.19□□□□□ -1.42
CHMP1B-202ENST00000588284 MT-ATP8P03928 68 aa6.18□□□□□ -1.42
CHMP1B-202ENST00000588284 CXCL6P80162 114 aa6.18□□□□□ -1.42
CHMP1B-202ENST00000588284 KRTAP13-2Q52LG2 175 aa6.18□□□□□ -1.42
CHMP1B-202ENST00000588284 BPY2O14599 106 aa6.17□□□□□ -1.42
CHMP1B-202ENST00000588284 Q8N1X5 172 aa6.17□□□□□ -1.42
CHMP1B-202ENST00000588284 APOBP04114 4563 aaKnown RBP6.16□□□□□ -1.42
CHMP1B-202ENST00000588284 SRRM2Q9UQ35 2752 aaKnown RBP6.16□□□□□ -1.42
CHMP1B-202ENST00000588284 IGKV3D-7A0A0C4DH55 119 aa6.16□□□□□ -1.42
CHMP1B-202ENST00000588284 SPAG11AQ6PDA7 123 aa6.16□□□□□ -1.42
CHMP1B-202ENST00000588284 HRCT1Q6UXD1 115 aa6.16□□□□□ -1.42
CHMP1B-202ENST00000588284 J3KT08 172 aa6.14□□□□□ -1.43
CHMP1B-202ENST00000588284 PRR26Q8N8Z3 221 aa6.14□□□□□ -1.43
CHMP1B-202ENST00000588284 SPINK1P00995 79 aa6.13□□□□□ -1.43
CHMP1B-202ENST00000588284 KRTAP4-5Q9BYR2 181 aa6.13□□□□□ -1.43
CHMP1B-202ENST00000588284 HERC1Q15751 4861 aa6.12□□□□□ -1.43
CHMP1B-202ENST00000588284 ASB16-AS1Q495Z4 193 aa6.12□□□□□ -1.43
CHMP1B-202ENST00000588284 Q5XG85 94 aa6.12□□□□□ -1.43
CHMP1B-202ENST00000588284 LIMD2Q9BT23 127 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms