RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 ZNF861PO60384 105 aa10.1□□□□□ -0.79
NFIX-210ENST00000588228 UBL5Q9BZL1 73 aa10.1□□□□□ -0.79
NFIX-210ENST00000588228 SCGB1A1P11684 91 aa10.09□□□□□ -0.79
NFIX-210ENST00000588228 IGLV8-61A0A075B6I0 122 aa10.09□□□□□ -0.79
NFIX-210ENST00000588228 TRBV7-7A0A0K0K1E9 115 aa10.09□□□□□ -0.79
NFIX-210ENST00000588228 Q6JHZ5 121 aa10.08□□□□□ -0.8
NFIX-210ENST00000588228 RYR2Q92736 4967 aa10.08□□□□□ -0.8
NFIX-210ENST00000588228 Q6Q795 121 aa10.07□□□□□ -0.8
NFIX-210ENST00000588228 SPRR4Q96PI1 79 aa10.07□□□□□ -0.8
NFIX-210ENST00000588228 ZNF706Q9Y5V0 76 aaPredicted RBP10.07□□□□□ -0.8
NFIX-210ENST00000588228 A0A1B0GW54 56 aa10.06□□□□□ -0.8
NFIX-210ENST00000588228 IGLV7-43P04211 117 aa10.06□□□□□ -0.8
NFIX-210ENST00000588228 IMUPQ9GZP8 106 aa10.06□□□□□ -0.8
NFIX-210ENST00000588228 A0A1B0GVY2 172 aa10.05□□□□□ -0.8
NFIX-210ENST00000588228 A0A1W2PNM2 257 aa10.05□□□□□ -0.8
NFIX-210ENST00000588228 Q8NBF4 154 aa10.05□□□□□ -0.8
NFIX-210ENST00000588228 LINC00483Q53H64 154 aa10.04□□□□□ -0.8
NFIX-210ENST00000588228 Q6ZVQ6 151 aa10.04□□□□□ -0.8
NFIX-210ENST00000588228 PCP4P48539 62 aa10.03□□□□□ -0.8
NFIX-210ENST00000588228 HAMPP81172 84 aa10.03□□□□□ -0.8
NFIX-210ENST00000588228 ATP5EP2Q5VTU8 51 aa10.03□□□□□ -0.8
NFIX-210ENST00000588228 IGFL1Q6UW32 110 aa10.03□□□□□ -0.8
NFIX-210ENST00000588228 IGKV3D-7A0A0C4DH55 119 aa10.02□□□□□ -0.81
NFIX-210ENST00000588228 KMT2CQ8NEZ4 4911 aaKnown RBP9.99□□□□□ -0.81
NFIX-210ENST00000588228 CRYGAP11844 174 aa9.99□□□□□ -0.81
NFIX-210ENST00000588228 NREPQ16612 68 aa9.96□□□□□ -0.81
NFIX-210ENST00000588228 LRP1BQ9NZR2 4599 aa9.96□□□□□ -0.82
NFIX-210ENST00000588228 A0A0G2JQZ4 141 aa9.96□□□□□ -0.82
NFIX-210ENST00000588228 CXCL6P80162 114 aa9.95□□□□□ -0.82
NFIX-210ENST00000588228 RPL37AP61513 92 aaKnown RBP9.94□□□□□ -0.82
NFIX-210ENST00000588228 SRRM2Q9UQ35 2752 aaKnown RBP9.93□□□□□ -0.82
NFIX-210ENST00000588228 DYNC1H1Q14204 4646 aaKnown RBP9.93□□□□□ -0.82
NFIX-210ENST00000588228 IGLV9-49A0A0B4J1Y8 123 aa9.93□□□□□ -0.82
NFIX-210ENST00000588228 C9orf153Q5TBE3 101 aa9.93□□□□□ -0.82
NFIX-210ENST00000588228 ANAPC11Q9NYG5 84 aa9.9□□□□□ -0.82
NFIX-210ENST00000588228 PKHD1P08F94 4074 aa9.9□□□□□ -0.82
NFIX-210ENST00000588228 HIST1H4AP62805 103 aaKnown RBP9.9□□□□□ -0.83
NFIX-210ENST00000588228 A0A087WSZ3 146 aa9.88□□□□□ -0.83
NFIX-210ENST00000588228 FAM236AA0A1B0GUQ0 79 aa9.88□□□□□ -0.83
NFIX-210ENST00000588228 FAM236BA0A1B0GV22 79 aa9.88□□□□□ -0.83
NFIX-210ENST00000588228 MOBPQ13875 183 aa9.87□□□□□ -0.83
NFIX-210ENST00000588228 A0A087WVE0 104 aa9.87□□□□□ -0.83
NFIX-210ENST00000588228 BPY2O14599 106 aa9.87□□□□□ -0.83
NFIX-210ENST00000588228 ANAPC13Q9BS18 74 aa9.82□□□□□ -0.84
NFIX-210ENST00000588228 FAM229BQ4G0N7 80 aa9.8□□□□□ -0.84
NFIX-210ENST00000588228 APOBP04114 4563 aaKnown RBP9.8□□□□□ -0.84
NFIX-210ENST00000588228 SSBP3-AS1Q7Z2R9 100 aa9.79□□□□□ -0.84
NFIX-210ENST00000588228 RYR3Q15413 4870 aa9.78□□□□□ -0.84
NFIX-210ENST00000588228 VPS13BQ7Z7G8 4022 aa9.78□□□□□ -0.84
NFIX-210ENST00000588228 SMR3BP02814 79 aaPredicted RBP9.77□□□□□ -0.84
NFIX-210ENST00000588228 IGKV4-1P06312 121 aa9.77□□□□□ -0.84
NFIX-210ENST00000588228 KRTAP1-4P0C5Y4 121 aa9.77□□□□□ -0.84
NFIX-210ENST00000588228 SPINK6Q6UWN8 80 aa9.77□□□□□ -0.84
NFIX-210ENST00000588228 ATOX1O00244 68 aa9.76□□□□□ -0.85
NFIX-210ENST00000588228 DSCR10P59022 87 aa9.76□□□□□ -0.85
NFIX-210ENST00000588228 HRCT1Q6UXD1 115 aa9.76□□□□□ -0.85
NFIX-210ENST00000588228 Q8N9L7 120 aa9.76□□□□□ -0.85
NFIX-210ENST00000588228 A0A087X002 238 aa9.75□□□□□ -0.85
NFIX-210ENST00000588228 SS18L2Q9UHA2 77 aa9.75□□□□□ -0.85
NFIX-210ENST00000588228 CD164Q04900 197 aa9.74□□□□□ -0.85
NFIX-210ENST00000588228 LINC00472Q9H8W2 130 aa9.74□□□□□ -0.85
NFIX-210ENST00000588228 KRTAP13-2Q52LG2 175 aa9.74□□□□□ -0.85
NFIX-210ENST00000588228 DEFB116Q30KQ4 102 aa9.72□□□□□ -0.85
NFIX-210ENST00000588228 KRTAP10-4P60372 401 aaPredicted RBP9.71□□□□□ -0.86
NFIX-210ENST00000588228 K7EQZ3 153 aa9.7□□□□□ -0.86
NFIX-210ENST00000588228 PLA2G1BP04054 148 aaKnown RBP9.7□□□□□ -0.86
NFIX-210ENST00000588228 J3KT08 172 aa9.69□□□□□ -0.86
NFIX-210ENST00000588228 Q96NJ1 140 aa9.67□□□□□ -0.86
NFIX-210ENST00000588228 A8MWP4 228 aa9.66□□□□□ -0.86
NFIX-210ENST00000588228 FAT1Q14517 4588 aa9.65□□□□□ -0.87
NFIX-210ENST00000588228 CDK2AP2O75956 126 aa9.64□□□□□ -0.87
NFIX-210ENST00000588228 PRR15Q8IV56 129 aa9.63□□□□□ -0.87
NFIX-210ENST00000588228 SERP2Q8N6R1 65 aa9.63□□□□□ -0.87
NFIX-210ENST00000588228 COX7CP15954 63 aa9.62□□□□□ -0.87
NFIX-210ENST00000588228 SMIM20Q8N5G0 67 aa9.62□□□□□ -0.87
NFIX-210ENST00000588228 TYMSOSQ8TAI1 123 aa9.62□□□□□ -0.87
NFIX-210ENST00000588228 FAM229AH3BQW9 127 aa9.61□□□□□ -0.87
NFIX-210ENST00000588228 ASB16-AS1Q495Z4 193 aa9.61□□□□□ -0.87
NFIX-210ENST00000588228 HCG22E2RYF7 251 aa9.6□□□□□ -0.87
NFIX-210ENST00000588228 UQCRQO14949 82 aa9.6□□□□□ -0.87
NFIX-210ENST00000588228 NDUFB1O75438 58 aa9.6□□□□□ -0.87
NFIX-210ENST00000588228 Q5XG85 94 aa9.6□□□□□ -0.87
NFIX-210ENST00000588228 CCDC179H3BU77 68 aa9.59□□□□□ -0.87
NFIX-210ENST00000588228 TRAV7A0A075B6U4 112 aa9.58□□□□□ -0.88
NFIX-210ENST00000588228 PRR26Q8N8Z3 221 aa9.58□□□□□ -0.88
NFIX-210ENST00000588228 C4orf48Q5BLP8 95 aa9.56□□□□□ -0.88
NFIX-210ENST00000588228 LIMD2Q9BT23 127 aa9.56□□□□□ -0.88
NFIX-210ENST00000588228 SPINK1P00995 79 aa9.54□□□□□ -0.88
NFIX-210ENST00000588228 Q5VSD8 79 aa9.53□□□□□ -0.88
NFIX-210ENST00000588228 RYR1P21817 5038 aa9.53□□□□□ -0.88
NFIX-210ENST00000588228 A0A1B0GVX0 72 aa9.52□□□□□ -0.89
NFIX-210ENST00000588228 KRTAP29-1A8MX34 341 aaPredicted RBP9.52□□□□□ -0.89
NFIX-210ENST00000588228 WFDC13Q8IUB5 93 aa9.52□□□□□ -0.89
NFIX-210ENST00000588228 OCR1Q9BZK8 76 aa9.52□□□□□ -0.89
NFIX-210ENST00000588228 HSPG2P98160 4391 aa9.51□□□□□ -0.89
NFIX-210ENST00000588228 MMP24-AS1A0A0U1RRL7 71 aa9.51□□□□□ -0.89
NFIX-210ENST00000588228 SPAG11AQ6PDA7 123 aa9.51□□□□□ -0.89
NFIX-210ENST00000588228 CASC2Q6XLA1 102 aa9.51□□□□□ -0.89
NFIX-210ENST00000588228 LINC00304Q8N9R0 145 aa9.51□□□□□ -0.89
NFIX-210ENST00000588228 RPS29P62273 56 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms