RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 NREPQ16612 68 aa9.29□□□□□ -0.92
CCDC43-203ENST00000588210 DEFB105AQ8NG35 78 aa9.29□□□□□ -0.92
CCDC43-203ENST00000588210 A0A1B0GW54 56 aa9.28□□□□□ -0.92
CCDC43-203ENST00000588210 C16orf90A8MZG2 172 aa9.28□□□□□ -0.92
CCDC43-203ENST00000588210 C14orf177Q52M58 125 aa9.28□□□□□ -0.92
CCDC43-203ENST00000588210 Q9BRP9 147 aa9.28□□□□□ -0.92
CCDC43-203ENST00000588210 FAM168BA1KXE4 195 aa9.28□□□□□ -0.92
CCDC43-203ENST00000588210 DNAH5Q8TE73 4624 aa9.28□□□□□ -0.92
CCDC43-203ENST00000588210 ETDCA0A1B0GVM5 59 aa9.27□□□□□ -0.93
CCDC43-203ENST00000588210 RPL37AP8A6NKH3 93 aa9.27□□□□□ -0.93
CCDC43-203ENST00000588210 KRTAP7-1Q8IUC3 87 aa9.27□□□□□ -0.93
CCDC43-203ENST00000588210 BPY2O14599 106 aa9.26□□□□□ -0.93
CCDC43-203ENST00000588210 SNURFQ9Y675 71 aa9.25□□□□□ -0.93
CCDC43-203ENST00000588210 IGLV5-52A0A0A0MRZ9 124 aa9.25□□□□□ -0.93
CCDC43-203ENST00000588210 ERC2-IT1O76042 136 aa9.25□□□□□ -0.93
CCDC43-203ENST00000588210 FUSP35637 526 aaKnown RBP eCLIP9.25□□□□□ -0.93
CCDC43-203ENST00000588210 Q8N9L7 120 aa9.25□□□□□ -0.93
CCDC43-203ENST00000588210 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.24□□□□□ -0.93
CCDC43-203ENST00000588210 NDUFC1O43677 76 aa9.24□□□□□ -0.93
CCDC43-203ENST00000588210 EPM2AB3EWF7 344 aa9.24□□□□□ -0.93
CCDC43-203ENST00000588210 MRPL55Q7Z7F7 128 aaKnown RBP9.23□□□□□ -0.93
CCDC43-203ENST00000588210 LRP1BQ9NZR2 4599 aa9.23□□□□□ -0.93
CCDC43-203ENST00000588210 A0A1W2PNM2 257 aa9.22□□□□□ -0.93
CCDC43-203ENST00000588210 SERP1Q9Y6X1 66 aa9.22□□□□□ -0.93
CCDC43-203ENST00000588210 ST20-AS1Q8NBB2 130 aa9.22□□□□□ -0.93
CCDC43-203ENST00000588210 F8WEM9 126 aa9.21□□□□□ -0.93
CCDC43-203ENST00000588210 C1orf137Q5JT78 98 aa9.21□□□□□ -0.93
CCDC43-203ENST00000588210 Q8NBF4 154 aa9.21□□□□□ -0.93
CCDC43-203ENST00000588210 OCR1Q9BZK8 76 aa9.2□□□□□ -0.94
CCDC43-203ENST00000588210 Q5XG85 94 aa9.19□□□□□ -0.94
CCDC43-203ENST00000588210 TMEM254Q8TBM7 123 aa9.19□□□□□ -0.94
CCDC43-203ENST00000588210 SPRR4Q96PI1 79 aa9.19□□□□□ -0.94
CCDC43-203ENST00000588210 C5orf47Q569G3 176 aa9.18□□□□□ -0.94
CCDC43-203ENST00000588210 ATP5EP56381 51 aaPredicted RBP9.17□□□□□ -0.94
CCDC43-203ENST00000588210 REG3GQ6UW15 175 aa9.17□□□□□ -0.94
CCDC43-203ENST00000588210 KRTAP10-1P60331 282 aa9.17□□□□□ -0.94
CCDC43-203ENST00000588210 CNBPP62633 177 aaKnown RBP9.17□□□□□ -0.94
CCDC43-203ENST00000588210 UBE2BP63146 152 aa9.17□□□□□ -0.94
CCDC43-203ENST00000588210 KIAA1109Q2LD37 5005 aa9.16□□□□□ -0.94
CCDC43-203ENST00000588210 CDK2AP2O75956 126 aa9.15□□□□□ -0.94
CCDC43-203ENST00000588210 C9orf163Q8N9P6 203 aa9.15□□□□□ -0.94
CCDC43-203ENST00000588210 A0A0U1RQV1 116 aa9.14□□□□□ -0.95
CCDC43-203ENST00000588210 SMIM29Q86T20 159 aa9.14□□□□□ -0.95
CCDC43-203ENST00000588210 RYR1P21817 5038 aa9.13□□□□□ -0.95
CCDC43-203ENST00000588210 APOBP04114 4563 aaKnown RBP9.13□□□□□ -0.95
CCDC43-203ENST00000588210 C4orf26Q17RF5 130 aa9.12□□□□□ -0.95
CCDC43-203ENST00000588210 DNAH8Q96JB1 4490 aa9.11□□□□□ -0.95
CCDC43-203ENST00000588210 A0A096LNI7 61 aa9.1□□□□□ -0.95
CCDC43-203ENST00000588210 DSCR10P59022 87 aa9.1□□□□□ -0.95
CCDC43-203ENST00000588210 Q6ZSA8 131 aa9.09□□□□□ -0.95
CCDC43-203ENST00000588210 FAM30AQ9NZY2 134 aa9.09□□□□□ -0.95
CCDC43-203ENST00000588210 HSPG2P98160 4391 aa9.08□□□□□ -0.96
CCDC43-203ENST00000588210 IGLV8-61A0A075B6I0 122 aa9.07□□□□□ -0.96
CCDC43-203ENST00000588210 SMIM26A0A096LP01 95 aa9.07□□□□□ -0.96
CCDC43-203ENST00000588210 HERC2O95714 4834 aa9.07□□□□□ -0.96
CCDC43-203ENST00000588210 IGFL1Q6UW32 110 aa9.06□□□□□ -0.96
CCDC43-203ENST00000588210 HRCT1Q6UXD1 115 aa9.06□□□□□ -0.96
CCDC43-203ENST00000588210 A0A1W2PNN7 141 aa9.06□□□□□ -0.96
CCDC43-203ENST00000588210 K7EQZ3 153 aa9.06□□□□□ -0.96
CCDC43-203ENST00000588210 PKIGQ9Y2B9 76 aa9.06□□□□□ -0.96
CCDC43-203ENST00000588210 IGKV2-24A0A0C4DH68 120 aa9.05□□□□□ -0.96
CCDC43-203ENST00000588210 PRLHP81277 87 aa9.05□□□□□ -0.96
CCDC43-203ENST00000588210 HIGD2AQ9BW72 106 aa9.05□□□□□ -0.96
CCDC43-203ENST00000588210 FP248Q71RG6 208 aaPredicted RBP9.02□□□□□ -0.97
CCDC43-203ENST00000588210 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.01□□□□□ -0.97
CCDC43-203ENST00000588210 HCG22E2RYF7 251 aa9.01□□□□□ -0.97
CCDC43-203ENST00000588210 CIRBP-AS1Q8TBR5 109 aa9□□□□□ -0.97
CCDC43-203ENST00000588210 A0A0G2JQZ4 141 aa9□□□□□ -0.97
CCDC43-203ENST00000588210 PANO1I0J062 215 aa9□□□□□ -0.97
CCDC43-203ENST00000588210 LINC00474Q9P2X8 69 aa9□□□□□ -0.97
CCDC43-203ENST00000588210 H0Y9J4 135 aa8.99□□□□□ -0.97
CCDC43-203ENST00000588210 SPACA4Q8TDM5 124 aa8.99□□□□□ -0.97
CCDC43-203ENST00000588210 ZCCHC13Q8WW36 166 aaKnown RBP8.99□□□□□ -0.97
CCDC43-203ENST00000588210 CHTF8P0CG12 524 aa8.98□□□□□ -0.97
CCDC43-203ENST00000588210 SPRR1BP22528 89 aa8.98□□□□□ -0.97
CCDC43-203ENST00000588210 Q8N1X5 172 aa8.98□□□□□ -0.97
CCDC43-203ENST00000588210 UBE2AP49459 152 aa8.98□□□□□ -0.97
CCDC43-203ENST00000588210 A0A087WSZ3 146 aa8.97□□□□□ -0.97
CCDC43-203ENST00000588210 PHF5AQ7RTV0 110 aaKnown RBP8.96□□□□□ -0.97
CCDC43-203ENST00000588210 KRTAP11-1Q8IUC1 163 aa8.96□□□□□ -0.97
CCDC43-203ENST00000588210 SMR3BP02814 79 aaPredicted RBP8.96□□□□□ -0.98
CCDC43-203ENST00000588210 KRTAP17-1Q9BYP8 105 aa8.95□□□□□ -0.98
CCDC43-203ENST00000588210 PLAC8Q9NZF1 115 aa8.94□□□□□ -0.98
CCDC43-203ENST00000588210 FAT1Q14517 4588 aa8.93□□□□□ -0.98
CCDC43-203ENST00000588210 FAM229AH3BQW9 127 aa8.93□□□□□ -0.98
CCDC43-203ENST00000588210 FAM229BQ4G0N7 80 aa8.93□□□□□ -0.98
CCDC43-203ENST00000588210 DEFB116Q30KQ4 102 aa8.92□□□□□ -0.98
CCDC43-203ENST00000588210 Q5VSD8 79 aa8.91□□□□□ -0.98
CCDC43-203ENST00000588210 KRTAP29-1A8MX34 341 aaPredicted RBP8.89□□□□□ -0.99
CCDC43-203ENST00000588210 WFDC13Q8IUB5 93 aa8.89□□□□□ -0.99
CCDC43-203ENST00000588210 hDV103S1A0JD37 113 aa8.88□□□□□ -0.99
CCDC43-203ENST00000588210 KRTAP4-5Q9BYR2 181 aa8.88□□□□□ -0.99
CCDC43-203ENST00000588210 PLA2G1BP04054 148 aaKnown RBP8.87□□□□□ -0.99
CCDC43-203ENST00000588210 RPL37AP61513 92 aaKnown RBP8.87□□□□□ -0.99
CCDC43-203ENST00000588210 KRTAP13-1Q8IUC0 172 aa8.87□□□□□ -0.99
CCDC43-203ENST00000588210 LINC00472Q9H8W2 130 aa8.87□□□□□ -0.99
CCDC43-203ENST00000588210 PRR15Q8IV56 129 aa8.86□□□□□ -0.99
CCDC43-203ENST00000588210 VPS13BQ7Z7G8 4022 aa8.86□□□□□ -0.99
CCDC43-203ENST00000588210 A8MWP4 228 aa8.85□□□□□ -0.99
CCDC43-203ENST00000588210 ABCA13Q86UQ4 5058 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms