RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 VPS13BQ7Z7G8 4022 aa6.84□□□□□ -1.31
VMP1-207ENST00000588131 IGLV5-48A0A075B6I7 105 aa6.84□□□□□ -1.31
VMP1-207ENST00000588131 KRTAP4-12Q9BQ66 201 aa6.84□□□□□ -1.31
VMP1-207ENST00000588131 H3BT86 120 aa6.83□□□□□ -1.32
VMP1-207ENST00000588131 Q8N377 158 aa6.83□□□□□ -1.32
VMP1-207ENST00000588131 ANKRD29Q8N6D5 301 aa6.83□□□□□ -1.32
VMP1-207ENST00000588131 KIAA1109Q2LD37 5005 aa6.82□□□□□ -1.32
VMP1-207ENST00000588131 F8W1H4 67 aa6.82□□□□□ -1.32
VMP1-207ENST00000588131 OCIAD2Q56VL3 154 aa6.82□□□□□ -1.32
VMP1-207ENST00000588131 LINC01600Q96MT4 127 aa6.82□□□□□ -1.32
VMP1-207ENST00000588131 SPRR4Q96PI1 79 aa6.82□□□□□ -1.32
VMP1-207ENST00000588131 GAGE2AQ6NT46 116 aa6.81□□□□□ -1.32
VMP1-207ENST00000588131 TEX49A0A1B0GTD5 131 aa6.8□□□□□ -1.32
VMP1-207ENST00000588131 TMEM256-PLSCR3K7ERE1 68 aa6.8□□□□□ -1.32
VMP1-207ENST00000588131 SPRR1BP22528 89 aa6.8□□□□□ -1.32
VMP1-207ENST00000588131 Q5VSD8 79 aa6.8□□□□□ -1.32
VMP1-207ENST00000588131 C3orf22Q8N5N4 141 aa6.8□□□□□ -1.32
VMP1-207ENST00000588131 PKHD1L1Q86WI1 4243 aa6.8□□□□□ -1.32
VMP1-207ENST00000588131 SMIM29Q86T20 159 aa6.79□□□□□ -1.32
VMP1-207ENST00000588131 PPDPFLQ8WWR9 84 aa6.79□□□□□ -1.32
VMP1-207ENST00000588131 ZNF706Q9Y5V0 76 aaPredicted RBP6.79□□□□□ -1.32
VMP1-207ENST00000588131 A0A1B0GV72 72 aa6.78□□□□□ -1.32
VMP1-207ENST00000588131 H3BQ85 93 aa6.78□□□□□ -1.32
VMP1-207ENST00000588131 PLA2G1BP04054 148 aaKnown RBP6.78□□□□□ -1.32
VMP1-207ENST00000588131 LINC00483Q53H64 154 aa6.78□□□□□ -1.32
VMP1-207ENST00000588131 SPINK6Q6UWN8 80 aa6.78□□□□□ -1.32
VMP1-207ENST00000588131 ANAPC11Q9NYG5 84 aa6.78□□□□□ -1.32
VMP1-207ENST00000588131 ABCA13Q86UQ4 5058 aa6.77□□□□□ -1.33
VMP1-207ENST00000588131 NDUFV3P56181 108 aaKnown RBP6.77□□□□□ -1.33
VMP1-207ENST00000588131 ETDBQ3ZM63 59 aa6.77□□□□□ -1.33
VMP1-207ENST00000588131 Q8N1X5 172 aa6.76□□□□□ -1.33
VMP1-207ENST00000588131 LAMTOR3Q9UHA4 124 aa6.76□□□□□ -1.33
VMP1-207ENST00000588131 KRTAP1-4P0C5Y4 121 aa6.75□□□□□ -1.33
VMP1-207ENST00000588131 TEN1Q86WV5 123 aa6.75□□□□□ -1.33
VMP1-207ENST00000588131 OBSCN-AS1Q96MR7 158 aa6.74□□□□□ -1.33
VMP1-207ENST00000588131 KRTAP9-9Q9BYP9 154 aa6.74□□□□□ -1.33
VMP1-207ENST00000588131 KRTAP9-4Q9BYQ2 154 aa6.74□□□□□ -1.33
VMP1-207ENST00000588131 A0A087X002 238 aa6.71□□□□□ -1.34
VMP1-207ENST00000588131 IGLV9-49A0A0B4J1Y8 123 aa6.71□□□□□ -1.34
VMP1-207ENST00000588131 JMJD7-PLA2G4BH0Y9G9 81 aa6.71□□□□□ -1.34
VMP1-207ENST00000588131 C14orf132Q9NPU4 83 aa6.71□□□□□ -1.34
VMP1-207ENST00000588131 A0A0G2JQZ4 141 aa6.7□□□□□ -1.34
VMP1-207ENST00000588131 F8WEM9 126 aa6.7□□□□□ -1.34
VMP1-207ENST00000588131 RBM3P98179 157 aaKnown RBP6.7□□□□□ -1.34
VMP1-207ENST00000588131 SRRM2Q9UQ35 2752 aaKnown RBP6.7□□□□□ -1.34
VMP1-207ENST00000588131 IGLV8-61A0A075B6I0 122 aa6.69□□□□□ -1.34
VMP1-207ENST00000588131 MOBPQ13875 183 aa6.69□□□□□ -1.34
VMP1-207ENST00000588131 FAM229BQ4G0N7 80 aa6.69□□□□□ -1.34
VMP1-207ENST00000588131 KRTAP13-2Q52LG2 175 aa6.69□□□□□ -1.34
VMP1-207ENST00000588131 C9orf153Q5TBE3 101 aa6.69□□□□□ -1.34
VMP1-207ENST00000588131 KRTAP4-8A0A0G2JLE6 195 aa6.68□□□□□ -1.34
VMP1-207ENST00000588131 TRBV7-4A0A0J9YYF1 115 aa6.68□□□□□ -1.34
VMP1-207ENST00000588131 KRTAP4-5Q9BYR2 181 aa6.68□□□□□ -1.34
VMP1-207ENST00000588131 IGFL1Q6UW32 110 aa6.67□□□□□ -1.34
VMP1-207ENST00000588131 Q8NBF4 154 aa6.67□□□□□ -1.34
VMP1-207ENST00000588131 DSCR8Q96T75 97 aa6.67□□□□□ -1.34
VMP1-207ENST00000588131 LOC110117498A0A087WWA1 95 aa6.66□□□□□ -1.34
VMP1-207ENST00000588131 CRYGAP11844 174 aa6.66□□□□□ -1.34
VMP1-207ENST00000588131 Q6ZQT0 140 aa6.66□□□□□ -1.34
VMP1-207ENST00000588131 KRTAP19-1Q8IUB9 90 aa6.66□□□□□ -1.34
VMP1-207ENST00000588131 PRR26Q8N8Z3 221 aa6.66□□□□□ -1.34
VMP1-207ENST00000588131 A0A1W2PNM2 257 aa6.64□□□□□ -1.35
VMP1-207ENST00000588131 Q6JHZ5 121 aa6.64□□□□□ -1.35
VMP1-207ENST00000588131 CCKP06307 115 aa6.63□□□□□ -1.35
VMP1-207ENST00000588131 VPS25Q9BRG1 176 aa6.63□□□□□ -1.35
VMP1-207ENST00000588131 PDE6GP18545 87 aa6.62□□□□□ -1.35
VMP1-207ENST00000588131 SSBP3-AS1Q7Z2R9 100 aa6.62□□□□□ -1.35
VMP1-207ENST00000588131 FAT3Q8TDW7 4589 aa6.62□□□□□ -1.35
VMP1-207ENST00000588131 TYMSOSQ8TAI1 123 aa6.61□□□□□ -1.35
VMP1-207ENST00000588131 HERC1Q15751 4861 aa6.6□□□□□ -1.35
VMP1-207ENST00000588131 HRCT1Q6UXD1 115 aa6.6□□□□□ -1.35
VMP1-207ENST00000588131 UBR4Q5T4S7 5183 aa6.6□□□□□ -1.35
VMP1-207ENST00000588131 LRP1Q07954 4544 aaKnown RBP6.58□□□□□ -1.36
VMP1-207ENST00000588131 Q6Q795 121 aa6.57□□□□□ -1.36
VMP1-207ENST00000588131 TNXBP22105 4242 aa6.57□□□□□ -1.36
VMP1-207ENST00000588131 TRBV7-7A0A0K0K1E9 115 aa6.56□□□□□ -1.36
VMP1-207ENST00000588131 J3QR89 54 aa6.56□□□□□ -1.36
VMP1-207ENST00000588131 KRTAP10-8P60410 259 aa6.56□□□□□ -1.36
VMP1-207ENST00000588131 C21orf62-AS1Q17RA5 79 aa6.56□□□□□ -1.36
VMP1-207ENST00000588131 A0A087WSZ3 146 aa6.55□□□□□ -1.36
VMP1-207ENST00000588131 K7ERU9 68 aa6.55□□□□□ -1.36
VMP1-207ENST00000588131 LINC00846Q9NV44 126 aa6.55□□□□□ -1.36
VMP1-207ENST00000588131 FAM240AA0A1B0GVK7 77 aa6.54□□□□□ -1.36
VMP1-207ENST00000588131 CD164Q04900 197 aa6.54□□□□□ -1.36
VMP1-207ENST00000588131 LINC00304Q8N9R0 145 aa6.54□□□□□ -1.36
VMP1-207ENST00000588131 MT1HL1P0DM35 61 aa6.53□□□□□ -1.36
VMP1-207ENST00000588131 A0A1B0GW54 56 aa6.52□□□□□ -1.37
VMP1-207ENST00000588131 ACYP1P07311 99 aa6.52□□□□□ -1.37
VMP1-207ENST00000588131 OXTP01178 125 aa6.5□□□□□ -1.37
VMP1-207ENST00000588131 FLG2Q5D862 2391 aaPredicted RBP6.5□□□□□ -1.37
VMP1-207ENST00000588131 SPAG11AQ6PDA7 123 aa6.49□□□□□ -1.37
VMP1-207ENST00000588131 Q6ZVQ6 151 aa6.49□□□□□ -1.37
VMP1-207ENST00000588131 CDIP1Q9H305 208 aa6.49□□□□□ -1.37
VMP1-207ENST00000588131 MYCBP2O75592 4640 aa6.48□□□□□ -1.37
VMP1-207ENST00000588131 SPINK1P00995 79 aa6.48□□□□□ -1.37
VMP1-207ENST00000588131 KRTAP29-1A8MX34 341 aaPredicted RBP6.47□□□□□ -1.37
VMP1-207ENST00000588131 NREPQ16612 68 aa6.47□□□□□ -1.37
VMP1-207ENST00000588131 LCE1DQ5T752 114 aa6.47□□□□□ -1.37
VMP1-207ENST00000588131 KRTAP4-7Q9BYR0 210 aa6.47□□□□□ -1.37
VMP1-207ENST00000588131 UBL5Q9BZL1 73 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms