RNA–Protein interactions for RNA: ENST00000587881.1

NEDD4L-220, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,984 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-220ENST00000587881 H0Y9J4 135 aa8.99□□□□□ -0.97
NEDD4L-220ENST00000587881 UBE2AP49459 152 aa8.99□□□□□ -0.97
NEDD4L-220ENST00000587881 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.99□□□□□ -0.97
NEDD4L-220ENST00000587881 A0A0G2JQZ4 141 aa8.99□□□□□ -0.97
NEDD4L-220ENST00000587881 HCG22E2RYF7 251 aa8.99□□□□□ -0.97
NEDD4L-220ENST00000587881 PKIGQ9Y2B9 76 aa8.98□□□□□ -0.97
NEDD4L-220ENST00000587881 PHF5AQ7RTV0 110 aaKnown RBP8.97□□□□□ -0.97
NEDD4L-220ENST00000587881 SPRR1BP22528 89 aa8.96□□□□□ -0.98
NEDD4L-220ENST00000587881 A0A087WSZ3 146 aa8.95□□□□□ -0.98
NEDD4L-220ENST00000587881 DNAH10Q8IVF4 4471 aa8.95□□□□□ -0.98
NEDD4L-220ENST00000587881 LYSTQ99698 3801 aa8.95□□□□□ -0.98
NEDD4L-220ENST00000587881 CHTF8P0CG12 524 aa8.95□□□□□ -0.98
NEDD4L-220ENST00000587881 FP248Q71RG6 208 aaPredicted RBP8.95□□□□□ -0.98
NEDD4L-220ENST00000587881 C9orf163Q8N9P6 203 aa8.95□□□□□ -0.98
NEDD4L-220ENST00000587881 KRTAP11-1Q8IUC1 163 aa8.94□□□□□ -0.98
NEDD4L-220ENST00000587881 MGAM2Q2M2H8 2515 aa8.94□□□□□ -0.98
NEDD4L-220ENST00000587881 STAB2Q8WWQ8 2551 aa8.94□□□□□ -0.98
NEDD4L-220ENST00000587881 ZCCHC13Q8WW36 166 aaKnown RBP8.93□□□□□ -0.98
NEDD4L-220ENST00000587881 DYNC2H1Q8NCM8 4307 aaKnown RBP8.93□□□□□ -0.98
NEDD4L-220ENST00000587881 DEFB116Q30KQ4 102 aa8.92□□□□□ -0.98
NEDD4L-220ENST00000587881 LINC00474Q9P2X8 69 aa8.92□□□□□ -0.98
NEDD4L-220ENST00000587881 LRCOL1A6NCL2 159 aa8.92□□□□□ -0.98
NEDD4L-220ENST00000587881 COL7A1Q02388 2944 aa8.91□□□□□ -0.98
NEDD4L-220ENST00000587881 B9D2Q9BPU9 175 aa8.9□□□□□ -0.98
NEDD4L-220ENST00000587881 NBDYA0A0U1RRE5 68 aa8.89□□□□□ -0.99
NEDD4L-220ENST00000587881 DNAH9Q9NYC9 4486 aa8.89□□□□□ -0.99
NEDD4L-220ENST00000587881 WFDC13Q8IUB5 93 aa8.88□□□□□ -0.99
NEDD4L-220ENST00000587881 RPL37AP61513 92 aaKnown RBP8.86□□□□□ -0.99
NEDD4L-220ENST00000587881 FAM229BQ4G0N7 80 aa8.86□□□□□ -0.99
NEDD4L-220ENST00000587881 DNAH7Q8WXX0 4024 aa8.85□□□□□ -0.99
NEDD4L-220ENST00000587881 KRTAP29-1A8MX34 341 aaPredicted RBP8.85□□□□□ -0.99
NEDD4L-220ENST00000587881 PRR15Q8IV56 129 aa8.85□□□□□ -0.99
NEDD4L-220ENST00000587881 NUPR2A6NF83 97 aa8.84□□□□□ -0.99
NEDD4L-220ENST00000587881 MP68P56378 58 aa8.84□□□□□ -0.99
NEDD4L-220ENST00000587881 Q6ZRN7 208 aaPredicted RBP8.84□□□□□ -0.99
NEDD4L-220ENST00000587881 LINC00472Q9H8W2 130 aa8.84□□□□□ -0.99
NEDD4L-220ENST00000587881 NDUFB1O75438 58 aa8.84□□□□□ -0.99
NEDD4L-220ENST00000587881 KRTAP13-1Q8IUC0 172 aa8.84□□□□□ -0.99
NEDD4L-220ENST00000587881 MDFIQ99750 246 aa8.84□□□□□ -0.99
NEDD4L-220ENST00000587881 A8MWP4 228 aa8.83□□□□□ -1
NEDD4L-220ENST00000587881 SRRM2Q9UQ35 2752 aaKnown RBP8.83□□□□□ -1
NEDD4L-220ENST00000587881 hDV103S1A0JD37 113 aa8.82□□□□□ -1
NEDD4L-220ENST00000587881 CASC2Q6XLA1 102 aa8.82□□□□□ -1
NEDD4L-220ENST00000587881 CSMD3Q7Z407 3707 aa8.82□□□□□ -1
NEDD4L-220ENST00000587881 TENM2Q9NT68 2774 aa8.82□□□□□ -1
NEDD4L-220ENST00000587881 PANO1I0J062 215 aa8.81□□□□□ -1
NEDD4L-220ENST00000587881 LINC00336Q6ZUF6 198 aa8.81□□□□□ -1
NEDD4L-220ENST00000587881 CYP4F30PQ9H0H9 118 aa8.79□□□□□ -1
NEDD4L-220ENST00000587881 H3BPC8 53 aa8.79□□□□□ -1
NEDD4L-220ENST00000587881 C1orf64Q8NEQ6 169 aa8.79□□□□□ -1
NEDD4L-220ENST00000587881 MPLKIPQ8TAP9 179 aa8.79□□□□□ -1
NEDD4L-220ENST00000587881 SPACA4Q8TDM5 124 aa8.79□□□□□ -1
NEDD4L-220ENST00000587881 TRAV22A0A0B4J277 110 aa8.77□□□□□ -1
NEDD4L-220ENST00000587881 PRO0628Q9UI54 55 aa8.77□□□□□ -1
NEDD4L-220ENST00000587881 PLECQ15149 4684 aaKnown RBP8.77□□□□□ -1.01
NEDD4L-220ENST00000587881 LINC00208Q96KT6 92 aa8.76□□□□□ -1.01
NEDD4L-220ENST00000587881 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.75□□□□□ -1.01
NEDD4L-220ENST00000587881 H0Y9P7 68 aa8.75□□□□□ -1.01
NEDD4L-220ENST00000587881 LINC00483Q53H64 154 aa8.73□□□□□ -1.01
NEDD4L-220ENST00000587881 A0A087WTM6 91 aa8.72□□□□□ -1.01
NEDD4L-220ENST00000587881 IGLV9-49A0A0B4J1Y8 123 aa8.72□□□□□ -1.01
NEDD4L-220ENST00000587881 ZNF706Q9Y5V0 76 aaPredicted RBP8.72□□□□□ -1.01
NEDD4L-220ENST00000587881 HECTD4Q9Y4D8 3996 aa8.72□□□□□ -1.01
NEDD4L-220ENST00000587881 MMP24-AS1A0A0U1RRL7 71 aa8.72□□□□□ -1.01
NEDD4L-220ENST00000587881 Q1T7F1 81 aa8.71□□□□□ -1.02
NEDD4L-220ENST00000587881 SPANXA2-OT1Q8N9U9 137 aa8.71□□□□□ -1.02
NEDD4L-220ENST00000587881 PRR4Q16378 134 aa8.7□□□□□ -1.02
NEDD4L-220ENST00000587881 Q96NJ1 140 aa8.69□□□□□ -1.02
NEDD4L-220ENST00000587881 RTL8CO15255 209 aa8.67□□□□□ -1.02
NEDD4L-220ENST00000587881 IGLV5-52A0A0A0MRZ9 124 aa8.66□□□□□ -1.02
NEDD4L-220ENST00000587881 VPS13DQ5THJ4 4388 aa8.66□□□□□ -1.02
NEDD4L-220ENST00000587881 ASB16-AS1Q495Z4 193 aa8.66□□□□□ -1.02
NEDD4L-220ENST00000587881 TP53AIP1Q9HCN2 124 aa8.66□□□□□ -1.02
NEDD4L-220ENST00000587881 PSORS1C2Q9UIG4 136 aa8.66□□□□□ -1.02
NEDD4L-220ENST00000587881 MOBPQ13875 183 aa8.65□□□□□ -1.02
NEDD4L-220ENST00000587881 BRK1Q8WUW1 75 aa8.65□□□□□ -1.02
NEDD4L-220ENST00000587881 WWC2-AS2Q96NR7 200 aa8.65□□□□□ -1.02
NEDD4L-220ENST00000587881 PLAC8Q9NZF1 115 aa8.65□□□□□ -1.02
NEDD4L-220ENST00000587881 J3QL48 77 aa8.64□□□□□ -1.03
NEDD4L-220ENST00000587881 ZNF861PO60384 105 aa8.64□□□□□ -1.03
NEDD4L-220ENST00000587881 Q6ZR54 194 aa8.62□□□□□ -1.03
NEDD4L-220ENST00000587881 C8orf17Q9NRJ1 99 aa8.62□□□□□ -1.03
NEDD4L-220ENST00000587881 STARD9Q9P2P6 4700 aa8.62□□□□□ -1.03
NEDD4L-220ENST00000587881 V9GYY9 64 aa8.61□□□□□ -1.03
NEDD4L-220ENST00000587881 A0A1B0GVX0 72 aa8.6□□□□□ -1.03
NEDD4L-220ENST00000587881 CDK2AP2O75956 126 aa8.6□□□□□ -1.03
NEDD4L-220ENST00000587881 PRKDCP78527 4128 aaKnown RBP8.59□□□□□ -1.03
NEDD4L-220ENST00000587881 IGHV6-1A0A0B4J1U7 121 aa8.58□□□□□ -1.04
NEDD4L-220ENST00000587881 IGLV7-46A0A075B6I9 117 aa8.57□□□□□ -1.04
NEDD4L-220ENST00000587881 ANAPC11Q9NYG5 84 aa8.57□□□□□ -1.04
NEDD4L-220ENST00000587881 PSPHP1O15172 72 aa8.54□□□□□ -1.04
NEDD4L-220ENST00000587881 C1orf134Q5TEV5 83 aa8.54□□□□□ -1.04
NEDD4L-220ENST00000587881 MRPL34Q9BQ48 92 aaKnown RBP8.54□□□□□ -1.04
NEDD4L-220ENST00000587881 KMT2AQ03164 3969 aa8.54□□□□□ -1.04
NEDD4L-220ENST00000587881 NDUFS5O43920 106 aa8.53□□□□□ -1.04
NEDD4L-220ENST00000587881 DNAH17Q9UFH2 4485 aa8.53□□□□□ -1.04
NEDD4L-220ENST00000587881 IGLV7-43P04211 117 aa8.52□□□□□ -1.05
NEDD4L-220ENST00000587881 C1orf195Q5TG92 126 aa8.52□□□□□ -1.05
NEDD4L-220ENST00000587881 PCOTHQ58A44 107 aa8.5□□□□□ -1.05
NEDD4L-220ENST00000587881 LIMD2Q9BT23 127 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms