RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 Q6ZRX8 168 aa3.54□□□□□ -1.84
SDF2-205ENST00000587629 C2orf91Q6ZV80 131 aa3.54□□□□□ -1.84
SDF2-205ENST00000587629 FSIP2Q5CZC0 6907 aa3.53□□□□□ -1.84
SDF2-205ENST00000587629 TRAV23DV6A0A075B6W5 121 aa3.53□□□□□ -1.84
SDF2-205ENST00000587629 TRBV10-2A0A0K0K1G8 114 aa3.53□□□□□ -1.84
SDF2-205ENST00000587629 F8W1H4 67 aa3.53□□□□□ -1.84
SDF2-205ENST00000587629 J3QQQ9 107 aa3.53□□□□□ -1.84
SDF2-205ENST00000587629 LEPROTO15243 131 aa3.53□□□□□ -1.84
SDF2-205ENST00000587629 RPS29P62273 56 aaKnown RBP3.53□□□□□ -1.84
SDF2-205ENST00000587629 LYRM7Q5U5X0 104 aa3.53□□□□□ -1.84
SDF2-205ENST00000587629 VPS25Q9BRG1 176 aa3.53□□□□□ -1.84
SDF2-205ENST00000587629 SPANXB1Q9NS25 103 aaPredicted RBP3.53□□□□□ -1.84
SDF2-205ENST00000587629 LOC107984156A0A0G2JMH3 177 aa3.52□□□□□ -1.85
SDF2-205ENST00000587629 A0A1W2PPM0 123 aa3.52□□□□□ -1.85
SDF2-205ENST00000587629 C9orf92A6NGG3 77 aa3.52□□□□□ -1.85
SDF2-205ENST00000587629 K7EP34 96 aa3.52□□□□□ -1.85
SDF2-205ENST00000587629 ZNF73O43830 326 aaPredicted RBP3.52□□□□□ -1.85
SDF2-205ENST00000587629 IGLV6-57P01721 117 aa3.52□□□□□ -1.85
SDF2-205ENST00000587629 SCGB1A1P11684 91 aa3.52□□□□□ -1.85
SDF2-205ENST00000587629 LGALS3P17931 250 aaKnown RBP3.52□□□□□ -1.85
SDF2-205ENST00000587629 PCOTHQ58A44 107 aa3.52□□□□□ -1.85
SDF2-205ENST00000587629 SOSTDC1Q6X4U4 206 aa3.52□□□□□ -1.85
SDF2-205ENST00000587629 ARL17AQ8IVW1 177 aa3.52□□□□□ -1.85
SDF2-205ENST00000587629 CRCT1Q9UGL9 99 aa3.52□□□□□ -1.85
SDF2-205ENST00000587629 NMUP48645 174 aa3.51□□□□□ -1.85
SDF2-205ENST00000587629 ADAMTSL4-AS1Q5T5F5 129 aa3.51□□□□□ -1.85
SDF2-205ENST00000587629 CEND1Q8N111 149 aa3.51□□□□□ -1.85
SDF2-205ENST00000587629 IGLV8-61A0A075B6I0 122 aa3.5□□□□□ -1.85
SDF2-205ENST00000587629 H3BUT2 72 aa3.5□□□□□ -1.85
SDF2-205ENST00000587629 NDUFC2O95298 119 aa3.5□□□□□ -1.85
SDF2-205ENST00000587629 HERVK_113P61574 105 aa3.5□□□□□ -1.85
SDF2-205ENST00000587629 MTURNQ8N3F0 131 aa3.5□□□□□ -1.85
SDF2-205ENST00000587629 OR13C6PQ8NH95 151 aa3.5□□□□□ -1.85
SDF2-205ENST00000587629 SPCS1Q9Y6A9 102 aa3.5□□□□□ -1.85
SDF2-205ENST00000587629 A0A0J9YXY3 114 aa3.49□□□□□ -1.85
SDF2-205ENST00000587629 A0A1B0GWB2 263 aa3.49□□□□□ -1.85
SDF2-205ENST00000587629 E9PLD3 99 aa3.49□□□□□ -1.85
SDF2-205ENST00000587629 MT1HP80294 61 aa3.49□□□□□ -1.85
SDF2-205ENST00000587629 KRTAP19-2Q3LHN2 52 aa3.49□□□□□ -1.85
SDF2-205ENST00000587629 DEFB105AQ8NG35 78 aa3.49□□□□□ -1.85
SDF2-205ENST00000587629 KRTAP3-1Q9BYR8 98 aa3.49□□□□□ -1.85
SDF2-205ENST00000587629 TRBV20-1A0A075B6N2 111 aa3.48□□□□□ -1.85
SDF2-205ENST00000587629 H7C2G1 150 aa3.48□□□□□ -1.85
SDF2-205ENST00000587629 Q1RN00 199 aa3.48□□□□□ -1.85
SDF2-205ENST00000587629 PCP2Q8IVA1 136 aa3.48□□□□□ -1.85
SDF2-205ENST00000587629 HIST1H4GQ99525 98 aa3.48□□□□□ -1.85
SDF2-205ENST00000587629 LIMD2Q9BT23 127 aa3.48□□□□□ -1.85
SDF2-205ENST00000587629 LINC00308Q8TCZ7 52 aa3.47□□□□□ -1.85
SDF2-205ENST00000587629 LAMTOR3Q9UHA4 124 aa3.47□□□□□ -1.85
SDF2-205ENST00000587629 A0A0G2JQZ4 141 aa3.46□□□□□ -1.86
SDF2-205ENST00000587629 SPRR1BP22528 89 aa3.46□□□□□ -1.86
SDF2-205ENST00000587629 COX7BP24311 80 aa3.46□□□□□ -1.86
SDF2-205ENST00000587629 Q6ZVH6 145 aa3.46□□□□□ -1.86
SDF2-205ENST00000587629 SIGMAR1Q99720 223 aa3.46□□□□□ -1.86
SDF2-205ENST00000587629 NHP2Q9NX24 153 aaKnown RBP3.46□□□□□ -1.86
SDF2-205ENST00000587629 SPANXCQ9NY87 97 aa3.46□□□□□ -1.86
SDF2-205ENST00000587629 DHRS4-AS1Q9P1J3 65 aa3.46□□□□□ -1.86
SDF2-205ENST00000587629 H3BMG7 143 aa3.45□□□□□ -1.86
SDF2-205ENST00000587629 M0R2T5 61 aa3.45□□□□□ -1.86
SDF2-205ENST00000587629 CFC1BP0CG36 223 aa3.45□□□□□ -1.86
SDF2-205ENST00000587629 FXYD2P54710 66 aa3.45□□□□□ -1.86
SDF2-205ENST00000587629 C6orf99Q4VX62 202 aa3.45□□□□□ -1.86
SDF2-205ENST00000587629 SCGB1D4Q6XE38 83 aa3.45□□□□□ -1.86
SDF2-205ENST00000587629 RAB37Q96AX2 223 aa3.45□□□□□ -1.86
SDF2-205ENST00000587629 LITAFQ99732 161 aa3.45□□□□□ -1.86
SDF2-205ENST00000587629 SPANXDQ9BXN6 97 aa3.45□□□□□ -1.86
SDF2-205ENST00000587629 ZNF815PA8K554 130 aa3.44□□□□□ -1.86
SDF2-205ENST00000587629 ELOF1P60002 83 aaKnown RBP3.44□□□□□ -1.86
SDF2-205ENST00000587629 KRTAP10-6P60371 365 aaPredicted RBP3.44□□□□□ -1.86
SDF2-205ENST00000587629 COPS9Q8WXC6 57 aa3.44□□□□□ -1.86
SDF2-205ENST00000587629 TTTY13Q9BZ97 58 aa3.44□□□□□ -1.86
SDF2-205ENST00000587629 TEX49A0A1B0GTD5 131 aa3.43□□□□□ -1.86
SDF2-205ENST00000587629 A0A1B0GV72 72 aa3.43□□□□□ -1.86
SDF2-205ENST00000587629 C1orf195Q5TG92 126 aa3.43□□□□□ -1.86
SDF2-205ENST00000587629 COX6B2Q6YFQ2 88 aa3.43□□□□□ -1.86
SDF2-205ENST00000587629 A0A0B4J2C4 111 aa3.42□□□□□ -1.86
SDF2-205ENST00000587629 TIMM17BO60830 172 aa3.42□□□□□ -1.86
SDF2-205ENST00000587629 CD164Q04900 197 aa3.42□□□□□ -1.86
SDF2-205ENST00000587629 SMIM29Q86T20 159 aa3.42□□□□□ -1.86
SDF2-205ENST00000587629 PRO1854Q9UHT4 67 aa3.42□□□□□ -1.86
SDF2-205ENST00000587629 COX6CP09669 75 aa3.41□□□□□ -1.86
SDF2-205ENST00000587629 SCGB1C2P0DMR2 95 aa3.41□□□□□ -1.86
SDF2-205ENST00000587629 IFITM1P13164 125 aa3.41□□□□□ -1.86
SDF2-205ENST00000587629 RPL37P61927 97 aaKnown RBP3.41□□□□□ -1.86
SDF2-205ENST00000587629 TEN1Q86WV5 123 aa3.41□□□□□ -1.86
SDF2-205ENST00000587629 PPDPFLQ8WWR9 84 aa3.41□□□□□ -1.86
SDF2-205ENST00000587629 C21orf62-AS1Q17RA5 79 aa3.4□□□□□ -1.87
SDF2-205ENST00000587629 ETDBQ3ZM63 59 aa3.4□□□□□ -1.87
SDF2-205ENST00000587629 PRO0461Q9UI25 63 aa3.4□□□□□ -1.87
SDF2-205ENST00000587629 TRBV7-6A0A0J9YX20 115 aa3.39□□□□□ -1.87
SDF2-205ENST00000587629 ATXN8Q156A1 80 aa3.39□□□□□ -1.87
SDF2-205ENST00000587629 Q5XG85 94 aa3.39□□□□□ -1.87
SDF2-205ENST00000587629 Q6Q795 121 aa3.39□□□□□ -1.87
SDF2-205ENST00000587629 SVIPQ8NHG7 77 aa3.39□□□□□ -1.87
SDF2-205ENST00000587629 IGLV5-48A0A075B6I7 105 aa3.38□□□□□ -1.87
SDF2-205ENST00000587629 K7ERJ3 54 aa3.38□□□□□ -1.87
SDF2-205ENST00000587629 TCL1BO95988 128 aa3.38□□□□□ -1.87
SDF2-205ENST00000587629 CFC1P0CG37 223 aa3.38□□□□□ -1.87
SDF2-205ENST00000587629 PSMB2P49721 201 aa3.38□□□□□ -1.87
SDF2-205ENST00000587629 MUSTN1Q8IVN3 82 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms