RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 LPAP08519 4548 aa6.33□□□□□ -1.4
ZNF540-205ENST00000587220 A0A087X002 238 aa6.32□□□□□ -1.4
ZNF540-205ENST00000587220 A0A0U1RRA0 63 aa6.31□□□□□ -1.4
ZNF540-205ENST00000587220 FAM19A1Q7Z5A9 133 aa6.31□□□□□ -1.4
ZNF540-205ENST00000587220 SMIM11BQ8TCY0 68 aa6.31□□□□□ -1.4
ZNF540-205ENST00000587220 FAM218AQ96MZ4 157 aa6.31□□□□□ -1.4
ZNF540-205ENST00000587220 VPREB1P12018 145 aa6.3□□□□□ -1.4
ZNF540-205ENST00000587220 TMEM126AQ9H061 195 aa6.3□□□□□ -1.4
ZNF540-205ENST00000587220 H3BQ85 93 aa6.29□□□□□ -1.4
ZNF540-205ENST00000587220 PRLHP81277 87 aa6.29□□□□□ -1.4
ZNF540-205ENST00000587220 KRTAP13-1Q8IUC0 172 aa6.29□□□□□ -1.4
ZNF540-205ENST00000587220 ANAPC11Q9NYG5 84 aa6.29□□□□□ -1.4
ZNF540-205ENST00000587220 FAM229BQ4G0N7 80 aa6.28□□□□□ -1.4
ZNF540-205ENST00000587220 JMJD7-PLA2G4BH0Y9G9 81 aa6.27□□□□□ -1.41
ZNF540-205ENST00000587220 ORMDL1Q9P0S3 153 aa6.27□□□□□ -1.41
ZNF540-205ENST00000587220 M0R378 163 aa6.26□□□□□ -1.41
ZNF540-205ENST00000587220 S100A7L2Q5SY68 101 aa6.26□□□□□ -1.41
ZNF540-205ENST00000587220 ATP5EP2Q5VTU8 51 aa6.26□□□□□ -1.41
ZNF540-205ENST00000587220 Q6JHZ5 121 aa6.26□□□□□ -1.41
ZNF540-205ENST00000587220 HIST1H4AP62805 103 aaKnown RBP6.25□□□□□ -1.41
ZNF540-205ENST00000587220 KRTAP13-2Q52LG2 175 aa6.25□□□□□ -1.41
ZNF540-205ENST00000587220 LINC00304Q8N9R0 145 aa6.25□□□□□ -1.41
ZNF540-205ENST00000587220 HIGD2AQ9BW72 106 aa6.25□□□□□ -1.41
ZNF540-205ENST00000587220 TMEM256-PLSCR3K7ERE1 68 aa6.24□□□□□ -1.41
ZNF540-205ENST00000587220 GAGE2AQ6NT46 116 aa6.24□□□□□ -1.41
ZNF540-205ENST00000587220 Q8NDZ9 215 aa6.24□□□□□ -1.41
ZNF540-205ENST00000587220 OR13C6PQ8NH95 151 aa6.24□□□□□ -1.41
ZNF540-205ENST00000587220 SMCR5Q8TEV8 140 aa6.24□□□□□ -1.41
ZNF540-205ENST00000587220 FAM236AA0A1B0GUQ0 79 aa6.23□□□□□ -1.41
ZNF540-205ENST00000587220 FAM236BA0A1B0GV22 79 aa6.23□□□□□ -1.41
ZNF540-205ENST00000587220 B5MCH6 92 aa6.23□□□□□ -1.41
ZNF540-205ENST00000587220 ATOX1O00244 68 aa6.23□□□□□ -1.41
ZNF540-205ENST00000587220 UQCRQO14949 82 aa6.23□□□□□ -1.41
ZNF540-205ENST00000587220 CCDC179H3BU77 68 aa6.22□□□□□ -1.41
ZNF540-205ENST00000587220 NCR3O14931 201 aa6.22□□□□□ -1.41
ZNF540-205ENST00000587220 GHRHP01286 108 aa6.22□□□□□ -1.41
ZNF540-205ENST00000587220 CCKP06307 115 aa6.22□□□□□ -1.41
ZNF540-205ENST00000587220 RETNLBQ9BQ08 111 aa6.22□□□□□ -1.41
ZNF540-205ENST00000587220 C3orf22Q8N5N4 141 aa6.21□□□□□ -1.42
ZNF540-205ENST00000587220 ZNF706Q9Y5V0 76 aaPredicted RBP6.21□□□□□ -1.42
ZNF540-205ENST00000587220 TRBV10-3A0A0K0K1G6 114 aa6.2□□□□□ -1.42
ZNF540-205ENST00000587220 PRYO14603 147 aa6.2□□□□□ -1.42
ZNF540-205ENST00000587220 MUC2Q02817 5179 aa6.2□□□□□ -1.42
ZNF540-205ENST00000587220 TRBV7-6A0A0J9YX20 115 aa6.19□□□□□ -1.42
ZNF540-205ENST00000587220 ETDCA0A1B0GVM5 59 aa6.19□□□□□ -1.42
ZNF540-205ENST00000587220 PDE6GP18545 87 aa6.19□□□□□ -1.42
ZNF540-205ENST00000587220 C14orf132Q9NPU4 83 aa6.19□□□□□ -1.42
ZNF540-205ENST00000587220 LOC110117498A0A087WWA1 95 aa6.18□□□□□ -1.42
ZNF540-205ENST00000587220 A0A0U1RQV1 116 aa6.18□□□□□ -1.42
ZNF540-205ENST00000587220 IGLV6-57P01721 117 aa6.18□□□□□ -1.42
ZNF540-205ENST00000587220 COX7CP15954 63 aa6.18□□□□□ -1.42
ZNF540-205ENST00000587220 C4orf48Q5BLP8 95 aa6.18□□□□□ -1.42
ZNF540-205ENST00000587220 LINC00575Q6W349 94 aa6.18□□□□□ -1.42
ZNF540-205ENST00000587220 SPRR4Q96PI1 79 aa6.18□□□□□ -1.42
ZNF540-205ENST00000587220 SPAG11AQ6PDA7 123 aa6.17□□□□□ -1.42
ZNF540-205ENST00000587220 SVIPQ8NHG7 77 aa6.17□□□□□ -1.42
ZNF540-205ENST00000587220 KCNQ1DNQ9H478 68 aa6.17□□□□□ -1.42
ZNF540-205ENST00000587220 LINC00846Q9NV44 126 aa6.17□□□□□ -1.42
ZNF540-205ENST00000587220 SS18L2Q9UHA2 77 aa6.17□□□□□ -1.42
ZNF540-205ENST00000587220 IGLV7-46A0A075B6I9 117 aa6.15□□□□□ -1.42
ZNF540-205ENST00000587220 hADV29S1A0JD25 119 aa6.15□□□□□ -1.42
ZNF540-205ENST00000587220 SPRR1AP35321 89 aa6.15□□□□□ -1.42
ZNF540-205ENST00000587220 C9orf153Q5TBE3 101 aa6.15□□□□□ -1.42
ZNF540-205ENST00000587220 C6orf99Q4VX62 202 aa6.14□□□□□ -1.43
ZNF540-205ENST00000587220 SERP2Q8N6R1 65 aa6.14□□□□□ -1.43
ZNF540-205ENST00000587220 TPRXLQ17RH7 258 aa6.13□□□□□ -1.43
ZNF540-205ENST00000587220 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.13□□□□□ -1.43
ZNF540-205ENST00000587220 Q8NBF4 154 aa6.13□□□□□ -1.43
ZNF540-205ENST00000587220 UBL5Q9BZL1 73 aa6.13□□□□□ -1.43
ZNF540-205ENST00000587220 KRTAP4-16G5E9R7 235 aaPredicted RBP6.12□□□□□ -1.43
ZNF540-205ENST00000587220 RBM3P98179 157 aaKnown RBP6.12□□□□□ -1.43
ZNF540-205ENST00000587220 Q6ZQT0 140 aa6.12□□□□□ -1.43
ZNF540-205ENST00000587220 TRAV23DV6A0A075B6W5 121 aa6.1□□□□□ -1.43
ZNF540-205ENST00000587220 IGLV9-49A0A0B4J1Y8 123 aa6.1□□□□□ -1.43
ZNF540-205ENST00000587220 RPS28P62857 69 aaKnown RBP6.1□□□□□ -1.43
ZNF540-205ENST00000587220 Q6ZRX8 168 aa6.1□□□□□ -1.43
ZNF540-205ENST00000587220 SMIM20Q8N5G0 67 aa6.1□□□□□ -1.43
ZNF540-205ENST00000587220 SPINK1P00995 79 aa6.09□□□□□ -1.43
ZNF540-205ENST00000587220 ELOF1P60002 83 aaKnown RBP6.09□□□□□ -1.43
ZNF540-205ENST00000587220 TMEM258P61165 79 aa6.09□□□□□ -1.43
ZNF540-205ENST00000587220 MOBPQ13875 183 aa6.09□□□□□ -1.43
ZNF540-205ENST00000587220 LINC00483Q53H64 154 aa6.09□□□□□ -1.43
ZNF540-205ENST00000587220 FP248Q71RG6 208 aaPredicted RBP6.09□□□□□ -1.43
ZNF540-205ENST00000587220 IGKV3D-7A0A0C4DH55 119 aa6.08□□□□□ -1.44
ZNF540-205ENST00000587220 COX7BP24311 80 aa6.08□□□□□ -1.44
ZNF540-205ENST00000587220 CXCL6P80162 114 aa6.08□□□□□ -1.44
ZNF540-205ENST00000587220 DSCR8Q96T75 97 aa6.08□□□□□ -1.44
ZNF540-205ENST00000587220 ZNF73O43830 326 aaPredicted RBP6.07□□□□□ -1.44
ZNF540-205ENST00000587220 ERC2-IT1O76042 136 aa6.07□□□□□ -1.44
ZNF540-205ENST00000587220 Q9BRP9 147 aa6.07□□□□□ -1.44
ZNF540-205ENST00000587220 TRBV7-4A0A0J9YYF1 115 aa6.06□□□□□ -1.44
ZNF540-205ENST00000587220 A0A1B0GW54 56 aa6.06□□□□□ -1.44
ZNF540-205ENST00000587220 Q6ZQY7 126 aa6.06□□□□□ -1.44
ZNF540-205ENST00000587220 LAMTOR3Q9UHA4 124 aa6.06□□□□□ -1.44
ZNF540-205ENST00000587220 J3KT08 172 aa6.05□□□□□ -1.44
ZNF540-205ENST00000587220 SSBP3-AS1Q7Z2R9 100 aa6.05□□□□□ -1.44
ZNF540-205ENST00000587220 TRAV7A0A075B6U4 112 aa6.02□□□□□ -1.45
ZNF540-205ENST00000587220 A0A087WVE0 104 aa6.02□□□□□ -1.45
ZNF540-205ENST00000587220 LINC01547P58512 204 aaPredicted RBP6.02□□□□□ -1.45
ZNF540-205ENST00000587220 RPS29P62273 56 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms