RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 C3orf79P0CE67 100 aa8.32□□□□□ -1.08
NPC1-205ENST00000587163 HIST1H2BKO60814 126 aa8.31□□□□□ -1.08
NPC1-205ENST00000587163 HIST1H2BJP06899 126 aa8.31□□□□□ -1.08
NPC1-205ENST00000587163 HIST1H2BOP23527 126 aa8.31□□□□□ -1.08
NPC1-205ENST00000587163 HIST1H2BBP33778 126 aa8.31□□□□□ -1.08
NPC1-205ENST00000587163 HIST1H2BDP58876 126 aa8.31□□□□□ -1.08
NPC1-205ENST00000587163 HIST1H2BCP62807 126 aa8.31□□□□□ -1.08
NPC1-205ENST00000587163 HIST2H2BEQ16778 126 aa8.31□□□□□ -1.08
NPC1-205ENST00000587163 ANKRD39Q53RE8 183 aa8.31□□□□□ -1.08
NPC1-205ENST00000587163 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.31□□□□□ -1.08
NPC1-205ENST00000587163 Q6JHZ5 121 aa8.31□□□□□ -1.08
NPC1-205ENST00000587163 CLEC2BQ92478 149 aa8.31□□□□□ -1.08
NPC1-205ENST00000587163 HIST1H2BHQ93079 126 aa8.31□□□□□ -1.08
NPC1-205ENST00000587163 Q96NJ1 140 aa8.31□□□□□ -1.08
NPC1-205ENST00000587163 HIST1H2BNQ99877 126 aa8.31□□□□□ -1.08
NPC1-205ENST00000587163 HIST1H2BMQ99879 126 aa8.31□□□□□ -1.08
NPC1-205ENST00000587163 TRAV13-2A0A0B4J235 113 aa8.3□□□□□ -1.08
NPC1-205ENST00000587163 LINC00575Q6W349 94 aa8.3□□□□□ -1.08
NPC1-205ENST00000587163 Q6ZVH6 145 aa8.3□□□□□ -1.08
NPC1-205ENST00000587163 OCIAD2Q56VL3 154 aa8.29□□□□□ -1.08
NPC1-205ENST00000587163 Q6ZQY7 126 aa8.29□□□□□ -1.08
NPC1-205ENST00000587163 SLC7A5P1Q8MH63 180 aa8.29□□□□□ -1.08
NPC1-205ENST00000587163 MT2AP02795 61 aa8.28□□□□□ -1.08
NPC1-205ENST00000587163 KRTAP19-1Q8IUB9 90 aa8.27□□□□□ -1.09
NPC1-205ENST00000587163 KRTDAPP60985 99 aa8.26□□□□□ -1.09
NPC1-205ENST00000587163 VAMP3Q15836 100 aa8.26□□□□□ -1.09
NPC1-205ENST00000587163 C20orf166-AS1Q96NR2 134 aa8.26□□□□□ -1.09
NPC1-205ENST00000587163 hADV29S1A0JD25 119 aa8.25□□□□□ -1.09
NPC1-205ENST00000587163 LST1O00453 97 aa8.25□□□□□ -1.09
NPC1-205ENST00000587163 A8MUU9 505 aa8.24□□□□□ -1.09
NPC1-205ENST00000587163 ATOH7Q8N100 152 aa8.24□□□□□ -1.09
NPC1-205ENST00000587163 TRBV20-1A0A075B6N2 111 aa8.23□□□□□ -1.09
NPC1-205ENST00000587163 MT1FP04733 61 aa8.23□□□□□ -1.09
NPC1-205ENST00000587163 H3BUT2 72 aa8.21□□□□□ -1.1
NPC1-205ENST00000587163 KRTAP9-3Q9BYQ3 159 aa8.2□□□□□ -1.1
NPC1-205ENST00000587163 KRTAP16-1A8MUX0 517 aa8.18□□□□□ -1.1
NPC1-205ENST00000587163 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.17□□□□□ -1.1
NPC1-205ENST00000587163 SNHG12Q9BXW3 62 aa8.17□□□□□ -1.1
NPC1-205ENST00000587163 KRTAP10-10P60014 251 aa8.15□□□□□ -1.1
NPC1-205ENST00000587163 COA6Q5JTJ3 125 aaKnown RBP8.15□□□□□ -1.1
NPC1-205ENST00000587163 PPDPFLQ8WWR9 84 aa8.14□□□□□ -1.11
NPC1-205ENST00000587163 DSCR10P59022 87 aa8.13□□□□□ -1.11
NPC1-205ENST00000587163 FAM236DA0A1B0GTK5 79 aa8.12□□□□□ -1.11
NPC1-205ENST00000587163 FAM236CP0DP71 79 aa8.12□□□□□ -1.11
NPC1-205ENST00000587163 SS18L2Q9UHA2 77 aa8.12□□□□□ -1.11
NPC1-205ENST00000587163 SCGB1D1O95968 90 aa8.11□□□□□ -1.11
NPC1-205ENST00000587163 MACF1Q9UPN3 7388 aaKnown RBP8.11□□□□□ -1.11
NPC1-205ENST00000587163 TEN1Q86WV5 123 aa8.09□□□□□ -1.11
NPC1-205ENST00000587163 MPLKIPQ8TAP9 179 aa8.09□□□□□ -1.11
NPC1-205ENST00000587163 A0A087WSZ3 146 aa8.08□□□□□ -1.12
NPC1-205ENST00000587163 HRES1P13985 223 aa8.08□□□□□ -1.12
NPC1-205ENST00000587163 BVES-AS1Q5T3Y7 98 aa8.08□□□□□ -1.12
NPC1-205ENST00000587163 C12orf57Q99622 126 aa8.08□□□□□ -1.12
NPC1-205ENST00000587163 SNRPEP62304 92 aaKnown RBP8.06□□□□□ -1.12
NPC1-205ENST00000587163 SYNE2Q8WXH0 6885 aaKnown RBP8.05□□□□□ -1.12
NPC1-205ENST00000587163 NDUFV3P56181 108 aaKnown RBP8.04□□□□□ -1.12
NPC1-205ENST00000587163 RBM12B-AS1Q9P1G2 102 aa8.04□□□□□ -1.12
NPC1-205ENST00000587163 LINC00313P59037 77 aa8.02□□□□□ -1.13
NPC1-205ENST00000587163 NOTCH2NLQ7Z3S9 236 aa8.02□□□□□ -1.13
NPC1-205ENST00000587163 SIGMAR1Q99720 223 aa8.01□□□□□ -1.13
NPC1-205ENST00000587163 KRTAP4-8Q9BYQ9 185 aa8.01□□□□□ -1.13
NPC1-205ENST00000587163 KRTAP19-6Q3LI70 58 aa8□□□□□ -1.13
NPC1-205ENST00000587163 FAM218AQ96MZ4 157 aa8□□□□□ -1.13
NPC1-205ENST00000587163 A0A1W2PNM2 257 aa7.99□□□□□ -1.13
NPC1-205ENST00000587163 H3BMG7 143 aa7.99□□□□□ -1.13
NPC1-205ENST00000587163 HIST1H4GQ99525 98 aa7.98□□□□□ -1.13
NPC1-205ENST00000587163 HSBP1L1C9JCN9 74 aa7.96□□□□□ -1.14
NPC1-205ENST00000587163 IGKV4-1P06312 121 aa7.96□□□□□ -1.14
NPC1-205ENST00000587163 LINC00846Q9NV44 126 aa7.95□□□□□ -1.14
NPC1-205ENST00000587163 H0YGX0 51 aa7.93□□□□□ -1.14
NPC1-205ENST00000587163 SNCGO76070 127 aa7.93□□□□□ -1.14
NPC1-205ENST00000587163 FABP2P12104 132 aa7.92□□□□□ -1.14
NPC1-205ENST00000587163 DEFB116Q30KQ4 102 aa7.92□□□□□ -1.14
NPC1-205ENST00000587163 HIST1H2BLQ99880 126 aa7.92□□□□□ -1.14
NPC1-205ENST00000587163 HIST3H2BBQ8N257 126 aa7.9□□□□□ -1.14
NPC1-205ENST00000587163 RAB37Q96AX2 223 aa7.89□□□□□ -1.15
NPC1-205ENST00000587163 LINC00472Q9H8W2 130 aa7.88□□□□□ -1.15
NPC1-205ENST00000587163 IGHV6-1A0A0B4J1U7 121 aa7.87□□□□□ -1.15
NPC1-205ENST00000587163 TRBV7-4A0A0J9YYF1 115 aa7.87□□□□□ -1.15
NPC1-205ENST00000587163 COX8AP10176 69 aa7.86□□□□□ -1.15
NPC1-205ENST00000587163 KRTAP6-3Q3LI67 103 aa7.86□□□□□ -1.15
NPC1-205ENST00000587163 MTURNQ8N3F0 131 aa7.86□□□□□ -1.15
NPC1-205ENST00000587163 S100A2P29034 98 aa7.85□□□□□ -1.15
NPC1-205ENST00000587163 ANKRD29Q8N6D5 301 aa7.85□□□□□ -1.15
NPC1-205ENST00000587163 A0A0B4J2C4 111 aa7.84□□□□□ -1.15
NPC1-205ENST00000587163 A0A1B0GV72 72 aa7.84□□□□□ -1.15
NPC1-205ENST00000587163 A0A1B0GX51 115 aa7.84□□□□□ -1.15
NPC1-205ENST00000587163 GHRHP01286 108 aa7.84□□□□□ -1.15
NPC1-205ENST00000587163 DLEU1O43261 78 aa7.82□□□□□ -1.16
NPC1-205ENST00000587163 SPINK7P58062 85 aa7.82□□□□□ -1.16
NPC1-205ENST00000587163 A8MWP4 228 aa7.8□□□□□ -1.16
NPC1-205ENST00000587163 Q8N9P0 234 aaPredicted RBP7.8□□□□□ -1.16
NPC1-205ENST00000587163 ZCCHC13Q8WW36 166 aaKnown RBP7.8□□□□□ -1.16
NPC1-205ENST00000587163 C14orf144Q96I85 54 aa7.79□□□□□ -1.16
NPC1-205ENST00000587163 A0A1B0GVX0 72 aa7.77□□□□□ -1.17
NPC1-205ENST00000587163 C8orf87E5RJ46 101 aa7.77□□□□□ -1.17
NPC1-205ENST00000587163 TRIAP1O43715 76 aa7.77□□□□□ -1.17
NPC1-205ENST00000587163 CCKP06307 115 aa7.77□□□□□ -1.17
NPC1-205ENST00000587163 HIGD1BQ9P298 99 aa7.77□□□□□ -1.17
NPC1-205ENST00000587163 PRO1854Q9UHT4 67 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms