RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 LCE2BO14633 110 aa7.04□□□□□ -1.28
LIG3-204ENST00000585740 BCE1O60756 84 aa7.04□□□□□ -1.28
LIG3-204ENST00000585740 UBE2AP49459 152 aa7.04□□□□□ -1.28
LIG3-204ENST00000585740 C1orf137Q5JT78 98 aa7.04□□□□□ -1.28
LIG3-204ENST00000585740 LINC00476Q8WZB0 136 aa7.04□□□□□ -1.28
LIG3-204ENST00000585740 DNAH2Q9P225 4427 aa7.04□□□□□ -1.28
LIG3-204ENST00000585740 HAMPP81172 84 aa7.03□□□□□ -1.28
LIG3-204ENST00000585740 PRLHP81277 87 aa7.03□□□□□ -1.28
LIG3-204ENST00000585740 HIGD2AQ9BW72 106 aa7.03□□□□□ -1.28
LIG3-204ENST00000585740 SPRR1BP22528 89 aa7.02□□□□□ -1.29
LIG3-204ENST00000585740 IGLV8-61A0A075B6I0 122 aa7.01□□□□□ -1.29
LIG3-204ENST00000585740 IGLV5-52A0A0A0MRZ9 124 aa7.01□□□□□ -1.29
LIG3-204ENST00000585740 NREPQ16612 68 aa7.01□□□□□ -1.29
LIG3-204ENST00000585740 SMIM29Q86T20 159 aa7.01□□□□□ -1.29
LIG3-204ENST00000585740 C3orf22Q8N5N4 141 aa7.01□□□□□ -1.29
LIG3-204ENST00000585740 Q8NBF4 154 aa7.01□□□□□ -1.29
LIG3-204ENST00000585740 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.01□□□□□ -1.29
LIG3-204ENST00000585740 PANO1I0J062 215 aa7□□□□□ -1.29
LIG3-204ENST00000585740 SPRR4Q96PI1 79 aa7□□□□□ -1.29
LIG3-204ENST00000585740 A0A1W2PNM2 257 aa6.99□□□□□ -1.29
LIG3-204ENST00000585740 KRTAP11-1Q8IUC1 163 aa6.99□□□□□ -1.29
LIG3-204ENST00000585740 PLAC8Q9NZF1 115 aa6.99□□□□□ -1.29
LIG3-204ENST00000585740 KRTAP13-1Q8IUC0 172 aa6.98□□□□□ -1.29
LIG3-204ENST00000585740 HECTD4Q9Y4D8 3996 aa6.97□□□□□ -1.29
LIG3-204ENST00000585740 A0A087WVE0 104 aa6.97□□□□□ -1.29
LIG3-204ENST00000585740 KMT2AQ03164 3969 aa6.96□□□□□ -1.29
LIG3-204ENST00000585740 UQCRQO14949 82 aa6.96□□□□□ -1.3
LIG3-204ENST00000585740 ZNF706Q9Y5V0 76 aaPredicted RBP6.96□□□□□ -1.3
LIG3-204ENST00000585740 ABCA13Q86UQ4 5058 aa6.96□□□□□ -1.3
LIG3-204ENST00000585740 BPY2O14599 106 aa6.95□□□□□ -1.3
LIG3-204ENST00000585740 CRYGAP11844 174 aa6.95□□□□□ -1.3
LIG3-204ENST00000585740 COX7CP15954 63 aa6.95□□□□□ -1.3
LIG3-204ENST00000585740 CCDC179H3BU77 68 aa6.94□□□□□ -1.3
LIG3-204ENST00000585740 IGFL1Q6UW32 110 aa6.94□□□□□ -1.3
LIG3-204ENST00000585740 SMIM20Q8N5G0 67 aa6.94□□□□□ -1.3
LIG3-204ENST00000585740 SERP2Q8N6R1 65 aa6.93□□□□□ -1.3
LIG3-204ENST00000585740 SVIPQ8NHG7 77 aa6.92□□□□□ -1.3
LIG3-204ENST00000585740 RPL37AP61513 92 aaKnown RBP6.91□□□□□ -1.3
LIG3-204ENST00000585740 SCXQ7RTU7 201 aa6.91□□□□□ -1.3
LIG3-204ENST00000585740 PSORS1C2Q9UIG4 136 aa6.91□□□□□ -1.3
LIG3-204ENST00000585740 LINC00483Q53H64 154 aa6.9□□□□□ -1.3
LIG3-204ENST00000585740 C9orf153Q5TBE3 101 aa6.9□□□□□ -1.3
LIG3-204ENST00000585740 ZNF861PO60384 105 aa6.89□□□□□ -1.31
LIG3-204ENST00000585740 IGKV4-1P06312 121 aa6.89□□□□□ -1.31
LIG3-204ENST00000585740 DNAH8Q96JB1 4490 aa6.89□□□□□ -1.31
LIG3-204ENST00000585740 TRAV7A0A075B6U4 112 aa6.87□□□□□ -1.31
LIG3-204ENST00000585740 DNAH11Q96DT5 4516 aa6.86□□□□□ -1.31
LIG3-204ENST00000585740 A0A087WSZ3 146 aa6.84□□□□□ -1.31
LIG3-204ENST00000585740 IGLV7-43P04211 117 aa6.84□□□□□ -1.31
LIG3-204ENST00000585740 KRTAP10-2P60368 255 aa6.84□□□□□ -1.31
LIG3-204ENST00000585740 Q6ZSA8 131 aa6.83□□□□□ -1.32
LIG3-204ENST00000585740 KRTAP4-5Q9BYR2 181 aa6.83□□□□□ -1.32
LIG3-204ENST00000585740 PKHD1P08F94 4074 aa6.82□□□□□ -1.32
LIG3-204ENST00000585740 DNAH5Q8TE73 4624 aa6.82□□□□□ -1.32
LIG3-204ENST00000585740 A0A0G2JQZ4 141 aa6.81□□□□□ -1.32
LIG3-204ENST00000585740 DSCR10P59022 87 aa6.81□□□□□ -1.32
LIG3-204ENST00000585740 Q8N9L7 120 aa6.81□□□□□ -1.32
LIG3-204ENST00000585740 CIRBP-AS1Q8TBR5 109 aa6.81□□□□□ -1.32
LIG3-204ENST00000585740 IGLV9-49A0A0B4J1Y8 123 aa6.8□□□□□ -1.32
LIG3-204ENST00000585740 J3KT08 172 aa6.8□□□□□ -1.32
LIG3-204ENST00000585740 SS18L2Q9UHA2 77 aa6.8□□□□□ -1.32
LIG3-204ENST00000585740 LINC00336Q6ZUF6 198 aa6.79□□□□□ -1.32
LIG3-204ENST00000585740 FAM30AQ9NZY2 134 aa6.79□□□□□ -1.32
LIG3-204ENST00000585740 KRTAP10-1P60331 282 aa6.78□□□□□ -1.32
LIG3-204ENST00000585740 DYNC1H1Q14204 4646 aaKnown RBP6.78□□□□□ -1.32
LIG3-204ENST00000585740 FAT2Q9NYQ8 4349 aa6.78□□□□□ -1.32
LIG3-204ENST00000585740 A0A1B0GVY2 172 aa6.77□□□□□ -1.33
LIG3-204ENST00000585740 K7EQZ3 153 aa6.77□□□□□ -1.33
LIG3-204ENST00000585740 HERC1Q15751 4861 aa6.76□□□□□ -1.33
LIG3-204ENST00000585740 HCG22E2RYF7 251 aa6.76□□□□□ -1.33
LIG3-204ENST00000585740 MOBPQ13875 183 aa6.76□□□□□ -1.33
LIG3-204ENST00000585740 LINC00472Q9H8W2 130 aa6.76□□□□□ -1.33
LIG3-204ENST00000585740 PKD1P98161 4303 aa6.75□□□□□ -1.33
LIG3-204ENST00000585740 TMEM258P61165 79 aa6.75□□□□□ -1.33
LIG3-204ENST00000585740 C20orf197Q8N268 126 aa6.75□□□□□ -1.33
LIG3-204ENST00000585740 A8MWP4 228 aa6.74□□□□□ -1.33
LIG3-204ENST00000585740 SSBP3-AS1Q7Z2R9 100 aa6.74□□□□□ -1.33
LIG3-204ENST00000585740 OCR1Q9BZK8 76 aa6.74□□□□□ -1.33
LIG3-204ENST00000585740 SRRM2Q9UQ35 2752 aaKnown RBP6.74□□□□□ -1.33
LIG3-204ENST00000585740 NDUFB1O75438 58 aa6.73□□□□□ -1.33
LIG3-204ENST00000585740 CD164Q04900 197 aa6.73□□□□□ -1.33
LIG3-204ENST00000585740 KLKP1Q107X0 134 aa6.73□□□□□ -1.33
LIG3-204ENST00000585740 PRR15Q8IV56 129 aa6.73□□□□□ -1.33
LIG3-204ENST00000585740 NDUFC1O43677 76 aa6.72□□□□□ -1.33
LIG3-204ENST00000585740 DEFB116Q30KQ4 102 aa6.72□□□□□ -1.33
LIG3-204ENST00000585740 FAM229BQ4G0N7 80 aa6.72□□□□□ -1.33
LIG3-204ENST00000585740 HSPG2P98160 4391 aa6.71□□□□□ -1.34
LIG3-204ENST00000585740 TMEM254Q8TBM7 123 aa6.69□□□□□ -1.34
LIG3-204ENST00000585740 ANAPC11Q9NYG5 84 aa6.69□□□□□ -1.34
LIG3-204ENST00000585740 HRCT1Q6UXD1 115 aa6.68□□□□□ -1.34
LIG3-204ENST00000585740 CDK2AP2O75956 126 aa6.67□□□□□ -1.34
LIG3-204ENST00000585740 CASC2Q6XLA1 102 aa6.67□□□□□ -1.34
LIG3-204ENST00000585740 Q96NJ1 140 aa6.67□□□□□ -1.34
LIG3-204ENST00000585740 CYSTM1Q9H1C7 97 aa6.67□□□□□ -1.34
LIG3-204ENST00000585740 KRTAP29-1A8MX34 341 aaPredicted RBP6.66□□□□□ -1.34
LIG3-204ENST00000585740 J3QL48 77 aa6.66□□□□□ -1.34
LIG3-204ENST00000585740 C5orf47Q569G3 176 aa6.66□□□□□ -1.34
LIG3-204ENST00000585740 WFDC13Q8IUB5 93 aa6.66□□□□□ -1.34
LIG3-204ENST00000585740 A0A0U1RQV1 116 aa6.65□□□□□ -1.34
LIG3-204ENST00000585740 ASB16-AS1Q495Z4 193 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms