RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 SPRR1BP22528 89 aa8.26□□□□□ -1.09
VAPA-209ENST00000585042 SMIM11BQ8TCY0 68 aa8.25□□□□□ -1.09
VAPA-209ENST00000585042 LIMD2Q9BT23 127 aa8.25□□□□□ -1.09
VAPA-209ENST00000585042 TAL2Q16559 108 aa8.24□□□□□ -1.09
VAPA-209ENST00000585042 ST20-AS1Q8NBB2 130 aa8.24□□□□□ -1.09
VAPA-209ENST00000585042 LAMTOR3Q9UHA4 124 aa8.23□□□□□ -1.09
VAPA-209ENST00000585042 RAB37Q96AX2 223 aa8.22□□□□□ -1.09
VAPA-209ENST00000585042 UQCR10Q9UDW1 63 aa8.22□□□□□ -1.09
VAPA-209ENST00000585042 TEX49A0A1B0GTD5 131 aa8.2□□□□□ -1.1
VAPA-209ENST00000585042 DEFB105AQ8NG35 78 aa8.2□□□□□ -1.1
VAPA-209ENST00000585042 PRO1933Q9H354 126 aa8.2□□□□□ -1.1
VAPA-209ENST00000585042 CD164Q04900 197 aa8.19□□□□□ -1.1
VAPA-209ENST00000585042 BVES-AS1Q5T3Y7 98 aa8.19□□□□□ -1.1
VAPA-209ENST00000585042 C2orf91Q6ZV80 131 aa8.19□□□□□ -1.1
VAPA-209ENST00000585042 CEND1Q8N111 149 aa8.18□□□□□ -1.1
VAPA-209ENST00000585042 A0A0B4J2C4 111 aa8.17□□□□□ -1.1
VAPA-209ENST00000585042 SNCGO76070 127 aa8.17□□□□□ -1.1
VAPA-209ENST00000585042 KRTAP19-2Q3LHN2 52 aa8.17□□□□□ -1.1
VAPA-209ENST00000585042 CRCT1Q9UGL9 99 aa8.17□□□□□ -1.1
VAPA-209ENST00000585042 CFC1BP0CG36 223 aa8.16□□□□□ -1.1
VAPA-209ENST00000585042 CFC1P0CG37 223 aa8.16□□□□□ -1.1
VAPA-209ENST00000585042 PCOTHQ58A44 107 aa8.16□□□□□ -1.1
VAPA-209ENST00000585042 LINC00575Q6W349 94 aa8.16□□□□□ -1.1
VAPA-209ENST00000585042 IGLV5-48A0A075B6I7 105 aa8.15□□□□□ -1.1
VAPA-209ENST00000585042 hADV29S1A0JD25 119 aa8.15□□□□□ -1.1
VAPA-209ENST00000585042 H7C2G1 150 aa8.15□□□□□ -1.1
VAPA-209ENST00000585042 Q5XG85 94 aa8.15□□□□□ -1.1
VAPA-209ENST00000585042 HRCT1Q6UXD1 115 aa8.15□□□□□ -1.1
VAPA-209ENST00000585042 IGLV8-61A0A075B6I0 122 aa8.14□□□□□ -1.11
VAPA-209ENST00000585042 Q1RN00 199 aa8.14□□□□□ -1.11
VAPA-209ENST00000585042 MT1HP80294 61 aa8.13□□□□□ -1.11
VAPA-209ENST00000585042 HSD52Q0P140 79 aa8.13□□□□□ -1.11
VAPA-209ENST00000585042 PRO1854Q9UHT4 67 aa8.13□□□□□ -1.11
VAPA-209ENST00000585042 C9orf92A6NGG3 77 aa8.12□□□□□ -1.11
VAPA-209ENST00000585042 PCP4L1A6NKN8 68 aa8.12□□□□□ -1.11
VAPA-209ENST00000585042 H0YGX0 51 aa8.12□□□□□ -1.11
VAPA-209ENST00000585042 F8WEM9 126 aa8.11□□□□□ -1.11
VAPA-209ENST00000585042 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.1□□□□□ -1.11
VAPA-209ENST00000585042 Q6ZQY7 126 aa8.1□□□□□ -1.11
VAPA-209ENST00000585042 FXYD2P54710 66 aa8.09□□□□□ -1.11
VAPA-209ENST00000585042 FSIP2Q5CZC0 6907 aa8.08□□□□□ -1.12
VAPA-209ENST00000585042 PPDPFLQ8WWR9 84 aa8.08□□□□□ -1.12
VAPA-209ENST00000585042 OCIAD2Q56VL3 154 aa8.07□□□□□ -1.12
VAPA-209ENST00000585042 SMIM29Q86T20 159 aa8.07□□□□□ -1.12
VAPA-209ENST00000585042 C1orf195Q5TG92 126 aa8.06□□□□□ -1.12
VAPA-209ENST00000585042 M0R143 59 aa8.05□□□□□ -1.12
VAPA-209ENST00000585042 SNHG12Q9BXW3 62 aa8.05□□□□□ -1.12
VAPA-209ENST00000585042 A0A1B0GX51 115 aa8.03□□□□□ -1.12
VAPA-209ENST00000585042 COX6CP09669 75 aa8.03□□□□□ -1.12
VAPA-209ENST00000585042 PSMB2P49721 201 aa8.03□□□□□ -1.12
VAPA-209ENST00000585042 RPL37P61927 97 aaKnown RBP8.03□□□□□ -1.12
VAPA-209ENST00000585042 Q6JHZ5 121 aa8.03□□□□□ -1.12
VAPA-209ENST00000585042 TCL1BO95988 128 aa8.01□□□□□ -1.13
VAPA-209ENST00000585042 KRTAP10-6P60371 365 aaPredicted RBP8.01□□□□□ -1.13
VAPA-209ENST00000585042 TRIAP1O43715 76 aa8□□□□□ -1.13
VAPA-209ENST00000585042 K7ERJ3 54 aa7.99□□□□□ -1.13
VAPA-209ENST00000585042 DNAL4O96015 105 aa7.98□□□□□ -1.13
VAPA-209ENST00000585042 FAM218AQ96MZ4 157 aa7.98□□□□□ -1.13
VAPA-209ENST00000585042 H3BQ85 93 aa7.97□□□□□ -1.13
VAPA-209ENST00000585042 M0R2T5 61 aa7.97□□□□□ -1.13
VAPA-209ENST00000585042 CLEC2BQ92478 149 aa7.96□□□□□ -1.14
VAPA-209ENST00000585042 SCGB1C2P0DMR2 95 aa7.95□□□□□ -1.14
VAPA-209ENST00000585042 COX6B2Q6YFQ2 88 aa7.95□□□□□ -1.14
VAPA-209ENST00000585042 A0A0G2JQZ4 141 aa7.94□□□□□ -1.14
VAPA-209ENST00000585042 FABP2P12104 132 aa7.94□□□□□ -1.14
VAPA-209ENST00000585042 NDUFV3P56181 108 aaKnown RBP7.94□□□□□ -1.14
VAPA-209ENST00000585042 BATFQ16520 125 aa7.94□□□□□ -1.14
VAPA-209ENST00000585042 COL5A1-AS1Q5SY13 56 aa7.94□□□□□ -1.14
VAPA-209ENST00000585042 IGFL1Q6UW32 110 aa7.93□□□□□ -1.14
VAPA-209ENST00000585042 ORMDL1Q9P0S3 153 aa7.93□□□□□ -1.14
VAPA-209ENST00000585042 H3BMG7 143 aa7.9□□□□□ -1.14
VAPA-209ENST00000585042 H3BUT2 72 aa7.9□□□□□ -1.14
VAPA-209ENST00000585042 TRBV7-7A0A0K0K1E9 115 aa7.89□□□□□ -1.15
VAPA-209ENST00000585042 TMEM256-PLSCR3K7ERE1 68 aa7.89□□□□□ -1.15
VAPA-209ENST00000585042 TRACP01848 142 aa7.88□□□□□ -1.15
VAPA-209ENST00000585042 ATP11AUNQ6ZP68 121 aa7.86□□□□□ -1.15
VAPA-209ENST00000585042 Q75L30 129 aa7.86□□□□□ -1.15
VAPA-209ENST00000585042 TEN1Q86WV5 123 aa7.86□□□□□ -1.15
VAPA-209ENST00000585042 SS18L2Q9UHA2 77 aa7.86□□□□□ -1.15
VAPA-209ENST00000585042 LOC100996750A0A140TA64 210 aa7.85□□□□□ -1.15
VAPA-209ENST00000585042 LST1O00453 97 aa7.85□□□□□ -1.15
VAPA-209ENST00000585042 Q6Q795 121 aa7.85□□□□□ -1.15
VAPA-209ENST00000585042 KRTAP4-6Q9BYQ5 205 aa7.85□□□□□ -1.15
VAPA-209ENST00000585042 FLGP20930 4061 aaPredicted RBP7.84□□□□□ -1.15
VAPA-209ENST00000585042 TAX1BP3O14907 124 aa7.84□□□□□ -1.15
VAPA-209ENST00000585042 C9orf118A6NHY6 69 aa7.83□□□□□ -1.16
VAPA-209ENST00000585042 UBE2V1Q13404 147 aa7.83□□□□□ -1.16
VAPA-209ENST00000585042 LYRM7Q5U5X0 104 aa7.83□□□□□ -1.16
VAPA-209ENST00000585042 ANKRD29Q8N6D5 301 aa7.83□□□□□ -1.16
VAPA-209ENST00000585042 ATXN8Q156A1 80 aa7.81□□□□□ -1.16
VAPA-209ENST00000585042 OBSCN-AS1Q96MR7 158 aa7.81□□□□□ -1.16
VAPA-209ENST00000585042 BAALC-AS2P0C853 105 aa7.78□□□□□ -1.16
VAPA-209ENST00000585042 A0A087WSZ3 146 aa7.77□□□□□ -1.17
VAPA-209ENST00000585042 A0A1B0GV72 72 aa7.77□□□□□ -1.17
VAPA-209ENST00000585042 NAA38Q9BRA0 125 aaKnown RBP7.77□□□□□ -1.17
VAPA-209ENST00000585042 TRBV7-4A0A0J9YYF1 115 aa7.76□□□□□ -1.17
VAPA-209ENST00000585042 A0A1W2PPM0 123 aa7.76□□□□□ -1.17
VAPA-209ENST00000585042 RBM3P98179 157 aaKnown RBP7.76□□□□□ -1.17
VAPA-209ENST00000585042 DSCR8Q96T75 97 aa7.76□□□□□ -1.17
VAPA-209ENST00000585042 TRBV20-1A0A075B6N2 111 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms