RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-222ENST00000584377 UBE2DNLQ8IWF7 75 aa8.41□□□□□ -1.06
CSNK1D-222ENST00000584377 TNP2Q05952 138 aa8.4□□□□□ -1.06
CSNK1D-222ENST00000584377 A0A096LNI7 61 aa8.4□□□□□ -1.07
CSNK1D-222ENST00000584377 IGKV2-24A0A0C4DH68 120 aa8.4□□□□□ -1.07
CSNK1D-222ENST00000584377 C1orf137Q5JT78 98 aa8.4□□□□□ -1.07
CSNK1D-222ENST00000584377 C16orf90A8MZG2 172 aa8.39□□□□□ -1.07
CSNK1D-222ENST00000584377 CNBPP62633 177 aaKnown RBP8.39□□□□□ -1.07
CSNK1D-222ENST00000584377 ZCCHC13Q8WW36 166 aaKnown RBP8.39□□□□□ -1.07
CSNK1D-222ENST00000584377 DNAH10Q8IVF4 4471 aa8.38□□□□□ -1.07
CSNK1D-222ENST00000584377 A0A1W2PNM2 257 aa8.38□□□□□ -1.07
CSNK1D-222ENST00000584377 APLNQ9ULZ1 77 aa8.37□□□□□ -1.07
CSNK1D-222ENST00000584377 A8MU10 97 aa8.37□□□□□ -1.07
CSNK1D-222ENST00000584377 A8MUN3 132 aa8.37□□□□□ -1.07
CSNK1D-222ENST00000584377 A0A1B0GW54 56 aa8.36□□□□□ -1.07
CSNK1D-222ENST00000584377 PRR4Q16378 134 aa8.36□□□□□ -1.07
CSNK1D-222ENST00000584377 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.36□□□□□ -1.07
CSNK1D-222ENST00000584377 A0A1W2PNN7 141 aa8.36□□□□□ -1.07
CSNK1D-222ENST00000584377 Q8NBF4 154 aa8.36□□□□□ -1.07
CSNK1D-222ENST00000584377 CYP4F30PQ9H0H9 118 aa8.35□□□□□ -1.07
CSNK1D-222ENST00000584377 TENM2Q9NT68 2774 aa8.34□□□□□ -1.07
CSNK1D-222ENST00000584377 DNAH9Q9NYC9 4486 aa8.34□□□□□ -1.08
CSNK1D-222ENST00000584377 PRLHP81277 87 aa8.33□□□□□ -1.08
CSNK1D-222ENST00000584377 C14orf177Q52M58 125 aa8.33□□□□□ -1.08
CSNK1D-222ENST00000584377 CSMD3Q7Z407 3707 aa8.32□□□□□ -1.08
CSNK1D-222ENST00000584377 SPRR4Q96PI1 79 aa8.32□□□□□ -1.08
CSNK1D-222ENST00000584377 B9D2Q9BPU9 175 aa8.32□□□□□ -1.08
CSNK1D-222ENST00000584377 Q5VV11 94 aa8.31□□□□□ -1.08
CSNK1D-222ENST00000584377 CHTF8P0CG12 524 aa8.3□□□□□ -1.08
CSNK1D-222ENST00000584377 LINC00476Q8WZB0 136 aa8.3□□□□□ -1.08
CSNK1D-222ENST00000584377 MDFIQ99750 246 aa8.29□□□□□ -1.08
CSNK1D-222ENST00000584377 PHF5AQ7RTV0 110 aaKnown RBP8.28□□□□□ -1.08
CSNK1D-222ENST00000584377 DNAH7Q8WXX0 4024 aa8.27□□□□□ -1.09
CSNK1D-222ENST00000584377 DYNC2H1Q8NCM8 4307 aaKnown RBP8.27□□□□□ -1.09
CSNK1D-222ENST00000584377 A0A0G2JQZ4 141 aa8.27□□□□□ -1.09
CSNK1D-222ENST00000584377 KTN1-AS1Q86SY8 53 aa8.27□□□□□ -1.09
CSNK1D-222ENST00000584377 NBDYA0A0U1RRE5 68 aa8.26□□□□□ -1.09
CSNK1D-222ENST00000584377 DSCR10P59022 87 aa8.26□□□□□ -1.09
CSNK1D-222ENST00000584377 IGFL1Q6UW32 110 aa8.26□□□□□ -1.09
CSNK1D-222ENST00000584377 KRTAP11-1Q8IUC1 163 aa8.26□□□□□ -1.09
CSNK1D-222ENST00000584377 C9orf163Q8N9P6 203 aa8.26□□□□□ -1.09
CSNK1D-222ENST00000584377 K7EQZ3 153 aa8.25□□□□□ -1.09
CSNK1D-222ENST00000584377 RBM12B-AS1Q9P1G2 102 aa8.25□□□□□ -1.09
CSNK1D-222ENST00000584377 CHKB-CPT1BH3BT56 60 aa8.25□□□□□ -1.09
CSNK1D-222ENST00000584377 NDUFB1O75438 58 aa8.25□□□□□ -1.09
CSNK1D-222ENST00000584377 NUPR2A6NF83 97 aa8.24□□□□□ -1.09
CSNK1D-222ENST00000584377 UBE2AP49459 152 aa8.24□□□□□ -1.09
CSNK1D-222ENST00000584377 PLECQ15149 4684 aaKnown RBP8.23□□□□□ -1.09
CSNK1D-222ENST00000584377 IGLV8-61A0A075B6I0 122 aa8.23□□□□□ -1.09
CSNK1D-222ENST00000584377 Q8N9P0 234 aaPredicted RBP8.22□□□□□ -1.09
CSNK1D-222ENST00000584377 SPTSSBQ8NFR3 76 aa8.22□□□□□ -1.09
CSNK1D-222ENST00000584377 H0Y9J4 135 aa8.21□□□□□ -1.09
CSNK1D-222ENST00000584377 SRRM2Q9UQ35 2752 aaKnown RBP8.21□□□□□ -1.1
CSNK1D-222ENST00000584377 HCG22E2RYF7 251 aa8.21□□□□□ -1.1
CSNK1D-222ENST00000584377 Q6ZRN7 208 aaPredicted RBP8.21□□□□□ -1.1
CSNK1D-222ENST00000584377 LIMD2Q9BT23 127 aa8.2□□□□□ -1.1
CSNK1D-222ENST00000584377 A0A087WSZ3 146 aa8.2□□□□□ -1.1
CSNK1D-222ENST00000584377 PRR15LQ9BU68 103 aa8.19□□□□□ -1.1
CSNK1D-222ENST00000584377 PANO1I0J062 215 aa8.18□□□□□ -1.1
CSNK1D-222ENST00000584377 MP68P56378 58 aa8.18□□□□□ -1.1
CSNK1D-222ENST00000584377 SPRR1BP22528 89 aa8.17□□□□□ -1.1
CSNK1D-222ENST00000584377 ATP11AUNQ6ZP68 121 aa8.17□□□□□ -1.1
CSNK1D-222ENST00000584377 LCA10Q71F78 164 aa8.17□□□□□ -1.1
CSNK1D-222ENST00000584377 DEFB116Q30KQ4 102 aa8.17□□□□□ -1.1
CSNK1D-222ENST00000584377 LINC00208Q96KT6 92 aa8.17□□□□□ -1.1
CSNK1D-222ENST00000584377 NDUFS5O43920 106 aa8.14□□□□□ -1.11
CSNK1D-222ENST00000584377 WFDC13Q8IUB5 93 aa8.14□□□□□ -1.11
CSNK1D-222ENST00000584377 A6NN06 94 aa8.13□□□□□ -1.11
CSNK1D-222ENST00000584377 SPANXA2-OT1Q8N9U9 137 aa8.13□□□□□ -1.11
CSNK1D-222ENST00000584377 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.13□□□□□ -1.11
CSNK1D-222ENST00000584377 STARD9Q9P2P6 4700 aa8.13□□□□□ -1.11
CSNK1D-222ENST00000584377 A6NED7 52 aa8.12□□□□□ -1.11
CSNK1D-222ENST00000584377 Q75L30 129 aa8.12□□□□□ -1.11
CSNK1D-222ENST00000584377 SPACA4Q8TDM5 124 aa8.12□□□□□ -1.11
CSNK1D-222ENST00000584377 KRTAP13-1Q8IUC0 172 aa8.12□□□□□ -1.11
CSNK1D-222ENST00000584377 A0A087WTM6 91 aa8.1□□□□□ -1.11
CSNK1D-222ENST00000584377 PRKDCP78527 4128 aaKnown RBP8.1□□□□□ -1.11
CSNK1D-222ENST00000584377 VPS13DQ5THJ4 4388 aa8.09□□□□□ -1.11
CSNK1D-222ENST00000584377 LOC101927531A0A1B0GV80 90 aa8.09□□□□□ -1.11
CSNK1D-222ENST00000584377 RPL37AP61513 92 aaKnown RBP8.09□□□□□ -1.11
CSNK1D-222ENST00000584377 H0Y9P7 68 aa8.08□□□□□ -1.12
CSNK1D-222ENST00000584377 CDC42SE1Q9NRR8 79 aa8.06□□□□□ -1.12
CSNK1D-222ENST00000584377 RTL8CO15255 209 aa8.05□□□□□ -1.12
CSNK1D-222ENST00000584377 LINC00472Q9H8W2 130 aa8.05□□□□□ -1.12
CSNK1D-222ENST00000584377 H3BPC8 53 aa8.05□□□□□ -1.12
CSNK1D-222ENST00000584377 KRTAP29-1A8MX34 341 aaPredicted RBP8.04□□□□□ -1.12
CSNK1D-222ENST00000584377 C7orf65Q6ZTY9 151 aa8.04□□□□□ -1.12
CSNK1D-222ENST00000584377 COA5Q86WW8 74 aa8.04□□□□□ -1.12
CSNK1D-222ENST00000584377 MEGF8Q7Z7M0 2845 aa8.04□□□□□ -1.12
CSNK1D-222ENST00000584377 IGLV9-49A0A0B4J1Y8 123 aa8.04□□□□□ -1.12
CSNK1D-222ENST00000584377 A8MWP4 228 aa8.03□□□□□ -1.12
CSNK1D-222ENST00000584377 HECTD4Q9Y4D8 3996 aa8.03□□□□□ -1.12
CSNK1D-222ENST00000584377 Q6ZR54 194 aa8.03□□□□□ -1.12
CSNK1D-222ENST00000584377 KMT2AQ03164 3969 aa8.02□□□□□ -1.13
CSNK1D-222ENST00000584377 MOBPQ13875 183 aa8.01□□□□□ -1.13
CSNK1D-222ENST00000584377 CASC2Q6XLA1 102 aa8.01□□□□□ -1.13
CSNK1D-222ENST00000584377 PSORS1C2Q9UIG4 136 aa8□□□□□ -1.13
CSNK1D-222ENST00000584377 LINC00483Q53H64 154 aa8□□□□□ -1.13
CSNK1D-222ENST00000584377 IGLV5-52A0A0A0MRZ9 124 aa7.99□□□□□ -1.13
CSNK1D-222ENST00000584377 ZNF706Q9Y5V0 76 aaPredicted RBP7.99□□□□□ -1.13
CSNK1D-222ENST00000584377 PLAC8Q9NZF1 115 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms