RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 DEFB105AQ8NG35 78 aa6.14□□□□□ -1.43
CCDC47-206ENST00000584112 PRO1933Q9H354 126 aa6.14□□□□□ -1.43
CCDC47-206ENST00000584112 A4D1N5 150 aa6.13□□□□□ -1.43
CCDC47-206ENST00000584112 PCP2Q8IVA1 136 aa6.13□□□□□ -1.43
CCDC47-206ENST00000584112 MUSTN1Q8IVN3 82 aa6.13□□□□□ -1.43
CCDC47-206ENST00000584112 TRAV13-2A0A0B4J235 113 aa6.12□□□□□ -1.43
CCDC47-206ENST00000584112 NHP2Q9NX24 153 aaKnown RBP6.12□□□□□ -1.43
CCDC47-206ENST00000584112 FLGP20930 4061 aaPredicted RBP6.11□□□□□ -1.43
CCDC47-206ENST00000584112 IGLV5-48A0A075B6I7 105 aa6.11□□□□□ -1.43
CCDC47-206ENST00000584112 M0R2T5 61 aa6.11□□□□□ -1.43
CCDC47-206ENST00000584112 H7C2G1 150 aa6.1□□□□□ -1.43
CCDC47-206ENST00000584112 HSBP1L1C9JCN9 74 aa6.09□□□□□ -1.43
CCDC47-206ENST00000584112 S100A2P29034 98 aa6.09□□□□□ -1.43
CCDC47-206ENST00000584112 SMIM29Q86T20 159 aa6.09□□□□□ -1.43
CCDC47-206ENST00000584112 SMIM11BQ8TCY0 68 aa6.09□□□□□ -1.43
CCDC47-206ENST00000584112 Q5XG85 94 aa6.08□□□□□ -1.44
CCDC47-206ENST00000584112 VAMP3Q15836 100 aa6.07□□□□□ -1.44
CCDC47-206ENST00000584112 HIST3H2BBQ8N257 126 aa6.07□□□□□ -1.44
CCDC47-206ENST00000584112 C9orf92A6NGG3 77 aa6.06□□□□□ -1.44
CCDC47-206ENST00000584112 HIST1H2BLQ99880 126 aa6.06□□□□□ -1.44
CCDC47-206ENST00000584112 MUC12Q9UKN1 5478 aa6.06□□□□□ -1.44
CCDC47-206ENST00000584112 F8WEM9 126 aa6.05□□□□□ -1.44
CCDC47-206ENST00000584112 S100A6P06703 90 aa6.04□□□□□ -1.44
CCDC47-206ENST00000584112 TCL1BO95988 128 aa6.03□□□□□ -1.44
CCDC47-206ENST00000584112 C1orf195Q5TG92 126 aa6.03□□□□□ -1.44
CCDC47-206ENST00000584112 LINC00575Q6W349 94 aa6.03□□□□□ -1.44
CCDC47-206ENST00000584112 C9orf118A6NHY6 69 aa6.02□□□□□ -1.45
CCDC47-206ENST00000584112 S100A1P23297 94 aa6.02□□□□□ -1.45
CCDC47-206ENST00000584112 PCOTHQ58A44 107 aa6.02□□□□□ -1.45
CCDC47-206ENST00000584112 IGLV8-61A0A075B6I0 122 aa6.01□□□□□ -1.45
CCDC47-206ENST00000584112 A0A0G2JQZ4 141 aa6.01□□□□□ -1.45
CCDC47-206ENST00000584112 hADV29S1A0JD25 119 aa6.01□□□□□ -1.45
CCDC47-206ENST00000584112 Q6ZQY7 126 aa6.01□□□□□ -1.45
CCDC47-206ENST00000584112 Q6JHZ5 121 aa6□□□□□ -1.45
CCDC47-206ENST00000584112 SCGB1D1O95968 90 aa5.99□□□□□ -1.45
CCDC47-206ENST00000584112 BVES-AS1Q5T3Y7 98 aa5.99□□□□□ -1.45
CCDC47-206ENST00000584112 HIST1H4GQ99525 98 aa5.99□□□□□ -1.45
CCDC47-206ENST00000584112 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.98□□□□□ -1.45
CCDC47-206ENST00000584112 PPDPFLQ8WWR9 84 aa5.98□□□□□ -1.45
CCDC47-206ENST00000584112 CLEC2BQ92478 149 aa5.98□□□□□ -1.45
CCDC47-206ENST00000584112 COX8AP10176 69 aa5.97□□□□□ -1.45
CCDC47-206ENST00000584112 RPL37P61927 97 aaKnown RBP5.96□□□□□ -1.46
CCDC47-206ENST00000584112 OCIAD2Q56VL3 154 aa5.96□□□□□ -1.46
CCDC47-206ENST00000584112 C12orf57Q99622 126 aa5.96□□□□□ -1.46
CCDC47-206ENST00000584112 TRBV7-7A0A0K0K1E9 115 aa5.95□□□□□ -1.46
CCDC47-206ENST00000584112 DLEU1O43261 78 aa5.95□□□□□ -1.46
CCDC47-206ENST00000584112 IGFL1Q6UW32 110 aa5.95□□□□□ -1.46
CCDC47-206ENST00000584112 SNCGO76070 127 aa5.94□□□□□ -1.46
CCDC47-206ENST00000584112 SNHG12Q9BXW3 62 aa5.94□□□□□ -1.46
CCDC47-206ENST00000584112 RAB37Q96AX2 223 aa5.93□□□□□ -1.46
CCDC47-206ENST00000584112 GPR98Q8WXG9 6306 aa5.92□□□□□ -1.46
CCDC47-206ENST00000584112 HIGD1BQ9P298 99 aa5.91□□□□□ -1.46
CCDC47-206ENST00000584112 KMT2DO14686 5537 aa5.91□□□□□ -1.46
CCDC47-206ENST00000584112 H0YGX0 51 aa5.9□□□□□ -1.46
CCDC47-206ENST00000584112 CFC1P0CG37 223 aa5.9□□□□□ -1.46
CCDC47-206ENST00000584112 A0A0B4J2C4 111 aa5.89□□□□□ -1.47
CCDC47-206ENST00000584112 LST1O00453 97 aa5.89□□□□□ -1.47
CCDC47-206ENST00000584112 SPATA45Q537H7 98 aa5.89□□□□□ -1.47
CCDC47-206ENST00000584112 C14orf144Q96I85 54 aa5.89□□□□□ -1.47
CCDC47-206ENST00000584112 SS18L2Q9UHA2 77 aa5.89□□□□□ -1.47
CCDC47-206ENST00000584112 H3BUT2 72 aa5.88□□□□□ -1.47
CCDC47-206ENST00000584112 SVIPQ8NHG7 77 aa5.88□□□□□ -1.47
CCDC47-206ENST00000584112 VAMP8Q9BV40 100 aa5.88□□□□□ -1.47
CCDC47-206ENST00000584112 PAM16Q9Y3D7 125 aa5.88□□□□□ -1.47
CCDC47-206ENST00000584112 Q6Q795 121 aa5.87□□□□□ -1.47
CCDC47-206ENST00000584112 COX6B2Q6YFQ2 88 aa5.87□□□□□ -1.47
CCDC47-206ENST00000584112 OBSCN-AS1Q96MR7 158 aa5.87□□□□□ -1.47
CCDC47-206ENST00000584112 Q75L30 129 aa5.86□□□□□ -1.47
CCDC47-206ENST00000584112 TEN1Q86WV5 123 aa5.86□□□□□ -1.47
CCDC47-206ENST00000584112 A0A1B0GX51 115 aa5.85□□□□□ -1.47
CCDC47-206ENST00000584112 NDUFV3P56181 108 aaKnown RBP5.85□□□□□ -1.47
CCDC47-206ENST00000584112 ATP11AUNQ6ZP68 121 aa5.85□□□□□ -1.47
CCDC47-206ENST00000584112 C2orf91Q6ZV80 131 aa5.85□□□□□ -1.47
CCDC47-206ENST00000584112 CEND1Q8N111 149 aa5.85□□□□□ -1.47
CCDC47-206ENST00000584112 FAM218AQ96MZ4 157 aa5.84□□□□□ -1.47
CCDC47-206ENST00000584112 KRTAP9-8Q9BYQ0 159 aa5.84□□□□□ -1.47
CCDC47-206ENST00000584112 PRO1854Q9UHT4 67 aa5.84□□□□□ -1.47
CCDC47-206ENST00000584112 H3BMG7 143 aa5.82□□□□□ -1.48
CCDC47-206ENST00000584112 KRTAP19-6Q3LI70 58 aa5.82□□□□□ -1.48
CCDC47-206ENST00000584112 Q96NJ1 140 aa5.82□□□□□ -1.48
CCDC47-206ENST00000584112 FABP2P12104 132 aa5.81□□□□□ -1.48
CCDC47-206ENST00000584112 A0A087WSZ3 146 aa5.8□□□□□ -1.48
CCDC47-206ENST00000584112 KRTAP2-3P0C7H8 128 aa5.8□□□□□ -1.48
CCDC47-206ENST00000584112 FXYD2P54710 66 aa5.8□□□□□ -1.48
CCDC47-206ENST00000584112 KRTAP2-4Q9BYR9 128 aa5.8□□□□□ -1.48
CCDC47-206ENST00000584112 LINC00846Q9NV44 126 aa5.8□□□□□ -1.48
CCDC47-206ENST00000584112 H3BQ85 93 aa5.79□□□□□ -1.48
CCDC47-206ENST00000584112 TRIAP1O43715 76 aa5.78□□□□□ -1.48
CCDC47-206ENST00000584112 DNAL4O96015 105 aa5.78□□□□□ -1.48
CCDC47-206ENST00000584112 C20orf166-AS1Q96NR2 134 aa5.78□□□□□ -1.48
CCDC47-206ENST00000584112 MDN1Q9NU22 5596 aa5.77□□□□□ -1.49
CCDC47-206ENST00000584112 A8MUU9 505 aa5.76□□□□□ -1.49
CCDC47-206ENST00000584112 HSD52Q0P140 79 aa5.76□□□□□ -1.49
CCDC47-206ENST00000584112 ORMDL1Q9P0S3 153 aa5.76□□□□□ -1.49
CCDC47-206ENST00000584112 COX6CP09669 75 aa5.75□□□□□ -1.49
CCDC47-206ENST00000584112 PSMB2P49721 201 aa5.75□□□□□ -1.49
CCDC47-206ENST00000584112 ANKRD29Q8N6D5 301 aa5.75□□□□□ -1.49
CCDC47-206ENST00000584112 SIGMAR1Q99720 223 aa5.75□□□□□ -1.49
CCDC47-206ENST00000584112 TRBV7-4A0A0J9YYF1 115 aa5.74□□□□□ -1.49
CCDC47-206ENST00000584112 A0A1W2PNM2 257 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms