RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 MT1BP07438 61 aa4.24□□□□□ -1.73
GGA3-212ENST00000582376 IFI27L1Q96BM0 104 aa4.24□□□□□ -1.73
GGA3-212ENST00000582376 SEC11CQ9BY50 192 aa4.24□□□□□ -1.73
GGA3-212ENST00000582376 C18orf32Q8TCD1 76 aa4.23□□□□□ -1.73
GGA3-212ENST00000582376 COX19Q49B96 90 aa4.22□□□□□ -1.73
GGA3-212ENST00000582376 Q5VV11 94 aa4.22□□□□□ -1.73
GGA3-212ENST00000582376 LINC00518Q8N0U6 118 aa4.22□□□□□ -1.73
GGA3-212ENST00000582376 LINC00308Q8TCZ7 52 aa4.22□□□□□ -1.73
GGA3-212ENST00000582376 TRAV13-2A0A0B4J235 113 aa4.21□□□□□ -1.74
GGA3-212ENST00000582376 A0A0J9YXY3 114 aa4.21□□□□□ -1.74
GGA3-212ENST00000582376 SLC7A5P1Q8MH63 180 aa4.21□□□□□ -1.74
GGA3-212ENST00000582376 NHP2Q9NX24 153 aaKnown RBP4.21□□□□□ -1.74
GGA3-212ENST00000582376 SS18L2Q9UHA2 77 aa4.21□□□□□ -1.74
GGA3-212ENST00000582376 LOC105371267A0A1B0GV96 52 aa4.2□□□□□ -1.74
GGA3-212ENST00000582376 A4D1N5 150 aa4.19□□□□□ -1.74
GGA3-212ENST00000582376 SPRR2DP22532 72 aa4.19□□□□□ -1.74
GGA3-212ENST00000582376 S100PP25815 95 aa4.19□□□□□ -1.74
GGA3-212ENST00000582376 LINC00313P59037 77 aa4.19□□□□□ -1.74
GGA3-212ENST00000582376 HERVK_113P61574 105 aa4.19□□□□□ -1.74
GGA3-212ENST00000582376 ANKRD39Q53RE8 183 aa4.19□□□□□ -1.74
GGA3-212ENST00000582376 OCIAD2Q56VL3 154 aa4.19□□□□□ -1.74
GGA3-212ENST00000582376 LCE1AQ5T7P2 110 aa4.18□□□□□ -1.74
GGA3-212ENST00000582376 A0A1W2PNM2 257 aa4.17□□□□□ -1.74
GGA3-212ENST00000582376 COLCA2A8K830 154 aa4.17□□□□□ -1.74
GGA3-212ENST00000582376 H0Y8G0 127 aa4.17□□□□□ -1.74
GGA3-212ENST00000582376 FAM218AQ96MZ4 157 aa4.17□□□□□ -1.74
GGA3-212ENST00000582376 SPINK7P58062 85 aa4.16□□□□□ -1.74
GGA3-212ENST00000582376 PLNP26678 52 aa4.15□□□□□ -1.75
GGA3-212ENST00000582376 SIGMAR1Q99720 223 aa4.15□□□□□ -1.75
GGA3-212ENST00000582376 LITAFQ99732 161 aa4.15□□□□□ -1.75
GGA3-212ENST00000582376 KRTAP19-8Q3LI54 63 aa4.14□□□□□ -1.75
GGA3-212ENST00000582376 TIMM17BO60830 172 aa4.13□□□□□ -1.75
GGA3-212ENST00000582376 WFDC13Q8IUB5 93 aa4.13□□□□□ -1.75
GGA3-212ENST00000582376 TRAPPC1Q9Y5R8 145 aa4.13□□□□□ -1.75
GGA3-212ENST00000582376 A6NDN8 102 aa4.12□□□□□ -1.75
GGA3-212ENST00000582376 SERF1AO75920 110 aa4.12□□□□□ -1.75
GGA3-212ENST00000582376 LCE3BQ5TA77 95 aa4.12□□□□□ -1.75
GGA3-212ENST00000582376 Q6ZQY7 126 aa4.12□□□□□ -1.75
GGA3-212ENST00000582376 CHCHD1Q96BP2 118 aaKnown RBP4.12□□□□□ -1.75
GGA3-212ENST00000582376 TMA7Q9Y2S6 64 aaKnown RBP4.12□□□□□ -1.75
GGA3-212ENST00000582376 A0A087WSZ3 146 aa4.11□□□□□ -1.75
GGA3-212ENST00000582376 H3BUT2 72 aa4.11□□□□□ -1.75
GGA3-212ENST00000582376 DPM2O94777 84 aa4.11□□□□□ -1.75
GGA3-212ENST00000582376 SCGB1D1O95968 90 aa4.11□□□□□ -1.75
GGA3-212ENST00000582376 IGKCP01834 107 aa4.1□□□□□ -1.75
GGA3-212ENST00000582376 IMUPQ9GZP8 106 aa4.1□□□□□ -1.75
GGA3-212ENST00000582376 E9PLD3 99 aa4.09□□□□□ -1.75
GGA3-212ENST00000582376 TEN1Q86WV5 123 aa4.09□□□□□ -1.75
GGA3-212ENST00000582376 ZCCHC13Q8WW36 166 aaKnown RBP4.09□□□□□ -1.75
GGA3-212ENST00000582376 PMCHL2Q9BQD1 86 aa4.09□□□□□ -1.75
GGA3-212ENST00000582376 SNHG12Q9BXW3 62 aa4.09□□□□□ -1.75
GGA3-212ENST00000582376 FAM236AA0A1B0GUQ0 79 aa4.08□□□□□ -1.76
GGA3-212ENST00000582376 FAM236BA0A1B0GV22 79 aa4.08□□□□□ -1.76
GGA3-212ENST00000582376 hADV29S1A0JD25 119 aa4.08□□□□□ -1.76
GGA3-212ENST00000582376 H1FX-AS1Q4G0G2 97 aa4.08□□□□□ -1.76
GGA3-212ENST00000582376 LINC00575Q6W349 94 aa4.08□□□□□ -1.76
GGA3-212ENST00000582376 SMIM11BQ8TCY0 68 aa4.08□□□□□ -1.76
GGA3-212ENST00000582376 IGKV4-1P06312 121 aa4.07□□□□□ -1.76
GGA3-212ENST00000582376 VAMP3Q15836 100 aa4.07□□□□□ -1.76
GGA3-212ENST00000582376 SPRR2GQ9BYE4 73 aa4.07□□□□□ -1.76
GGA3-212ENST00000582376 HSBP1O75506 76 aa4.06□□□□□ -1.76
GGA3-212ENST00000582376 KRTAP8-1Q8IUC2 63 aa4.06□□□□□ -1.76
GGA3-212ENST00000582376 PPDPFLQ8WWR9 84 aa4.06□□□□□ -1.76
GGA3-212ENST00000582376 LEPROTL1O95214 131 aa4.05□□□□□ -1.76
GGA3-212ENST00000582376 IGHV6-1A0A0B4J1U7 121 aa4.04□□□□□ -1.76
GGA3-212ENST00000582376 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.04□□□□□ -1.76
GGA3-212ENST00000582376 COPS9Q8WXC6 57 aa4.04□□□□□ -1.76
GGA3-212ENST00000582376 HSPB8Q9UJY1 196 aa4.04□□□□□ -1.76
GGA3-212ENST00000582376 S100A6P06703 90 aa4.03□□□□□ -1.76
GGA3-212ENST00000582376 C3orf79P0CE67 100 aa4.02□□□□□ -1.77
GGA3-212ENST00000582376 IFITM1P13164 125 aa4.01□□□□□ -1.77
GGA3-212ENST00000582376 CLLU1Q5K131 121 aa4.01□□□□□ -1.77
GGA3-212ENST00000582376 TMEM218A2RU14 115 aa4□□□□□ -1.77
GGA3-212ENST00000582376 C8orf87E5RJ46 101 aa3.99□□□□□ -1.77
GGA3-212ENST00000582376 SNAPINO95295 136 aa3.99□□□□□ -1.77
GGA3-212ENST00000582376 TTTY13Q9BZ97 58 aa3.99□□□□□ -1.77
GGA3-212ENST00000582376 FABP4P15090 132 aa3.98□□□□□ -1.77
GGA3-212ENST00000582376 DEFB116Q30KQ4 102 aa3.98□□□□□ -1.77
GGA3-212ENST00000582376 MUSTN1Q8IVN3 82 aa3.98□□□□□ -1.77
GGA3-212ENST00000582376 SCGB1D4Q6XE38 83 aa3.97□□□□□ -1.77
GGA3-212ENST00000582376 KRTAP4-9Q9BYQ8 210 aa3.97□□□□□ -1.77
GGA3-212ENST00000582376 PCP4L1A6NKN8 68 aa3.96□□□□□ -1.78
GGA3-212ENST00000582376 SMCPP49901 116 aaPredicted RBP3.96□□□□□ -1.78
GGA3-212ENST00000582376 NDUFV3P56181 108 aaKnown RBP3.95□□□□□ -1.78
GGA3-212ENST00000582376 LYRM7Q5U5X0 104 aa3.95□□□□□ -1.78
GGA3-212ENST00000582376 UQCC3Q6UW78 93 aa3.95□□□□□ -1.78
GGA3-212ENST00000582376 RAB37Q96AX2 223 aa3.95□□□□□ -1.78
GGA3-212ENST00000582376 C12orf57Q99622 126 aa3.95□□□□□ -1.78
GGA3-212ENST00000582376 A0A1B0GVX0 72 aa3.94□□□□□ -1.78
GGA3-212ENST00000582376 DSCR8Q96T75 97 aa3.94□□□□□ -1.78
GGA3-212ENST00000582376 LINC00472Q9H8W2 130 aa3.94□□□□□ -1.78
GGA3-212ENST00000582376 A6NJY4 79 aa3.93□□□□□ -1.78
GGA3-212ENST00000582376 C5orf47Q569G3 176 aa3.93□□□□□ -1.78
GGA3-212ENST00000582376 H3BMG7 143 aa3.92□□□□□ -1.78
GGA3-212ENST00000582376 TRGC2P03986 189 aa3.92□□□□□ -1.78
GGA3-212ENST00000582376 LINC00310P59036 64 aa3.92□□□□□ -1.78
GGA3-212ENST00000582376 DSTQ03001 7570 aaKnown RBP3.92□□□□□ -1.78
GGA3-212ENST00000582376 BVES-AS1Q5T3Y7 98 aa3.91□□□□□ -1.78
GGA3-212ENST00000582376 IGKV3D-7A0A0C4DH55 119 aa3.9□□□□□ -1.79
GGA3-212ENST00000582376 TRBV7-4A0A0J9YYF1 115 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms