RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 HECTD4Q9Y4D8 3996 aa3.86□□□□□ -1.79
PTPRM-213ENST00000580949 ETDCA0A1B0GVM5 59 aa3.85□□□□□ -1.79
PTPRM-213ENST00000580949 INAFM2P0DMQ5 153 aa3.85□□□□□ -1.79
PTPRM-213ENST00000580949 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.85□□□□□ -1.79
PTPRM-213ENST00000580949 FRAS1Q86XX4 4008 aa3.85□□□□□ -1.79
PTPRM-213ENST00000580949 K7ERU9 68 aa3.84□□□□□ -1.79
PTPRM-213ENST00000580949 SNCGO76070 127 aa3.84□□□□□ -1.79
PTPRM-213ENST00000580949 LINC01547P58512 204 aaPredicted RBP3.84□□□□□ -1.79
PTPRM-213ENST00000580949 UBE2BP63146 152 aa3.84□□□□□ -1.79
PTPRM-213ENST00000580949 ST20-AS1Q8NBB2 130 aa3.84□□□□□ -1.79
PTPRM-213ENST00000580949 SMCR5Q8TEV8 140 aa3.84□□□□□ -1.79
PTPRM-213ENST00000580949 DHRS4-AS1Q9P1J3 65 aa3.84□□□□□ -1.79
PTPRM-213ENST00000580949 DNAH8Q96JB1 4490 aa3.83□□□□□ -1.8
PTPRM-213ENST00000580949 KMT2CQ8NEZ4 4911 aaKnown RBP3.83□□□□□ -1.8
PTPRM-213ENST00000580949 PKD1P98161 4303 aa3.83□□□□□ -1.8
PTPRM-213ENST00000580949 A0A1B0GV72 72 aa3.83□□□□□ -1.8
PTPRM-213ENST00000580949 TMEM256-PLSCR3K7ERE1 68 aa3.83□□□□□ -1.8
PTPRM-213ENST00000580949 PRLHP81277 87 aa3.83□□□□□ -1.8
PTPRM-213ENST00000580949 Q6ZSA8 131 aa3.83□□□□□ -1.8
PTPRM-213ENST00000580949 FAM19A1Q7Z5A9 133 aa3.83□□□□□ -1.8
PTPRM-213ENST00000580949 Q8N377 158 aa3.83□□□□□ -1.8
PTPRM-213ENST00000580949 A0A1B0GVY2 172 aa3.82□□□□□ -1.8
PTPRM-213ENST00000580949 KRTAP13-1Q8IUC0 172 aa3.82□□□□□ -1.8
PTPRM-213ENST00000580949 DEFB105AQ8NG35 78 aa3.82□□□□□ -1.8
PTPRM-213ENST00000580949 CIRBP-AS1Q8TBR5 109 aa3.82□□□□□ -1.8
PTPRM-213ENST00000580949 C14orf132Q9NPU4 83 aa3.82□□□□□ -1.8
PTPRM-213ENST00000580949 DYNC1H1Q14204 4646 aaKnown RBP3.81□□□□□ -1.8
PTPRM-213ENST00000580949 IGLV5-48A0A075B6I7 105 aa3.81□□□□□ -1.8
PTPRM-213ENST00000580949 IGLV9-49A0A0B4J1Y8 123 aa3.81□□□□□ -1.8
PTPRM-213ENST00000580949 H0Y9J4 135 aa3.81□□□□□ -1.8
PTPRM-213ENST00000580949 BCE1O60756 84 aa3.81□□□□□ -1.8
PTPRM-213ENST00000580949 HAMPP81172 84 aa3.81□□□□□ -1.8
PTPRM-213ENST00000580949 KRTAP2-2Q9BYT5 123 aa3.81□□□□□ -1.8
PTPRM-213ENST00000580949 PSORS1C2Q9UIG4 136 aa3.81□□□□□ -1.8
PTPRM-213ENST00000580949 LRP1BQ9NZR2 4599 aa3.8□□□□□ -1.8
PTPRM-213ENST00000580949 H3BQ85 93 aa3.8□□□□□ -1.8
PTPRM-213ENST00000580949 J3QR89 54 aa3.8□□□□□ -1.8
PTPRM-213ENST00000580949 CDK2AP2O75956 126 aa3.8□□□□□ -1.8
PTPRM-213ENST00000580949 NDUFV3P56181 108 aaKnown RBP3.8□□□□□ -1.8
PTPRM-213ENST00000580949 LINC00336Q6ZUF6 198 aa3.8□□□□□ -1.8
PTPRM-213ENST00000580949 SCXQ7RTU7 201 aa3.8□□□□□ -1.8
PTPRM-213ENST00000580949 HIGD2AQ9BW72 106 aa3.8□□□□□ -1.8
PTPRM-213ENST00000580949 LAMTOR3Q9UHA4 124 aa3.8□□□□□ -1.8
PTPRM-213ENST00000580949 SRRM2Q9UQ35 2752 aaKnown RBP3.8□□□□□ -1.8
PTPRM-213ENST00000580949 JMJD7-PLA2G4BH0Y9G9 81 aa3.79□□□□□ -1.8
PTPRM-213ENST00000580949 UBE2AP49459 152 aa3.79□□□□□ -1.8
PTPRM-213ENST00000580949 SMIM29Q86T20 159 aa3.79□□□□□ -1.8
PTPRM-213ENST00000580949 C3orf22Q8N5N4 141 aa3.79□□□□□ -1.8
PTPRM-213ENST00000580949 LOC110117498A0A087WWA1 95 aa3.78□□□□□ -1.8
PTPRM-213ENST00000580949 CCKP06307 115 aa3.78□□□□□ -1.8
PTPRM-213ENST00000580949 RBM3P98179 157 aaKnown RBP3.78□□□□□ -1.8
PTPRM-213ENST00000580949 Q6ZQT0 140 aa3.78□□□□□ -1.8
PTPRM-213ENST00000580949 VPS25Q9BRG1 176 aa3.78□□□□□ -1.8
PTPRM-213ENST00000580949 RYR3Q15413 4870 aa3.78□□□□□ -1.8
PTPRM-213ENST00000580949 TRBV7-4A0A0J9YYF1 115 aa3.77□□□□□ -1.81
PTPRM-213ENST00000580949 FAM240AA0A1B0GVK7 77 aa3.77□□□□□ -1.81
PTPRM-213ENST00000580949 MT3P25713 68 aa3.77□□□□□ -1.81
PTPRM-213ENST00000580949 C1orf137Q5JT78 98 aa3.77□□□□□ -1.81
PTPRM-213ENST00000580949 ZNF861PO60384 105 aa3.76□□□□□ -1.81
PTPRM-213ENST00000580949 IGLV7-43P04211 117 aa3.76□□□□□ -1.81
PTPRM-213ENST00000580949 SPRR1BP22528 89 aa3.76□□□□□ -1.81
PTPRM-213ENST00000580949 XGP55808 180 aa3.76□□□□□ -1.81
PTPRM-213ENST00000580949 A0A0G2JQZ4 141 aa3.75□□□□□ -1.81
PTPRM-213ENST00000580949 ACYP1P07311 99 aa3.75□□□□□ -1.81
PTPRM-213ENST00000580949 SPRR4Q96PI1 79 aa3.75□□□□□ -1.81
PTPRM-213ENST00000580949 DSCR8Q96T75 97 aa3.75□□□□□ -1.81
PTPRM-213ENST00000580949 LINC00846Q9NV44 126 aa3.75□□□□□ -1.81
PTPRM-213ENST00000580949 PKHD1P08F94 4074 aa3.75□□□□□ -1.81
PTPRM-213ENST00000580949 A0A1W2PNM2 257 aa3.74□□□□□ -1.81
PTPRM-213ENST00000580949 MT-ATP8P03928 68 aa3.74□□□□□ -1.81
PTPRM-213ENST00000580949 IGLV8-61A0A075B6I0 122 aa3.73□□□□□ -1.81
PTPRM-213ENST00000580949 PDE6GP18545 87 aa3.73□□□□□ -1.81
PTPRM-213ENST00000580949 LINC00483Q53H64 154 aa3.73□□□□□ -1.81
PTPRM-213ENST00000580949 SIGMAR1Q99720 223 aa3.73□□□□□ -1.81
PTPRM-213ENST00000580949 ANAPC11Q9NYG5 84 aa3.73□□□□□ -1.81
PTPRM-213ENST00000580949 APOBP04114 4563 aaKnown RBP3.73□□□□□ -1.81
PTPRM-213ENST00000580949 IGFL1Q6UW32 110 aa3.72□□□□□ -1.81
PTPRM-213ENST00000580949 Q6ZVQ6 151 aa3.72□□□□□ -1.81
PTPRM-213ENST00000580949 LINC00643Q86TS7 51 aa3.71□□□□□ -1.82
PTPRM-213ENST00000580949 F8WEM9 126 aa3.7□□□□□ -1.82
PTPRM-213ENST00000580949 SMR3BP02814 79 aaPredicted RBP3.7□□□□□ -1.82
PTPRM-213ENST00000580949 Q8NBF4 154 aa3.7□□□□□ -1.82
PTPRM-213ENST00000580949 ZNF706Q9Y5V0 76 aaPredicted RBP3.7□□□□□ -1.82
PTPRM-213ENST00000580949 FAT1Q14517 4588 aa3.7□□□□□ -1.82
PTPRM-213ENST00000580949 IGKV3D-7A0A0C4DH55 119 aa3.69□□□□□ -1.82
PTPRM-213ENST00000580949 CRYGAP11844 174 aa3.69□□□□□ -1.82
PTPRM-213ENST00000580949 KRTAP10-4P60372 401 aaPredicted RBP3.69□□□□□ -1.82
PTPRM-213ENST00000580949 KRTAP1-4P0C5Y4 121 aa3.68□□□□□ -1.82
PTPRM-213ENST00000580949 RPL37AP61513 92 aaKnown RBP3.68□□□□□ -1.82
PTPRM-213ENST00000580949 Q6JHZ5 121 aa3.68□□□□□ -1.82
PTPRM-213ENST00000580949 TRBV7-7A0A0K0K1E9 115 aa3.67□□□□□ -1.82
PTPRM-213ENST00000580949 MOBPQ13875 183 aa3.67□□□□□ -1.82
PTPRM-213ENST00000580949 UBL5Q9BZL1 73 aa3.67□□□□□ -1.82
PTPRM-213ENST00000580949 VPS13BQ7Z7G8 4022 aa3.67□□□□□ -1.82
PTPRM-213ENST00000580949 A0A087X002 238 aa3.66□□□□□ -1.82
PTPRM-213ENST00000580949 A0A1B0GW54 56 aa3.66□□□□□ -1.82
PTPRM-213ENST00000580949 KRTAP13-2Q52LG2 175 aa3.66□□□□□ -1.82
PTPRM-213ENST00000580949 C9orf153Q5TBE3 101 aa3.66□□□□□ -1.82
PTPRM-213ENST00000580949 RYR1P21817 5038 aa3.65□□□□□ -1.82
PTPRM-213ENST00000580949 NREPQ16612 68 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms