RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 TMEM258P61165 79 aa8.58□□□□□ -1.04
CDK5RAP3-219ENST00000580670 Q6ZRX8 168 aa8.58□□□□□ -1.04
CDK5RAP3-219ENST00000580670 FAM19A1Q7Z5A9 133 aa8.58□□□□□ -1.04
CDK5RAP3-219ENST00000580670 LINC00528Q8N1L1 170 aa8.58□□□□□ -1.04
CDK5RAP3-219ENST00000580670 PSORS1C2Q9UIG4 136 aa8.57□□□□□ -1.04
CDK5RAP3-219ENST00000580670 BCE1O60756 84 aa8.56□□□□□ -1.04
CDK5RAP3-219ENST00000580670 A0A087WVE0 104 aa8.55□□□□□ -1.04
CDK5RAP3-219ENST00000580670 PRLHP81277 87 aa8.55□□□□□ -1.04
CDK5RAP3-219ENST00000580670 UBE2AP49459 152 aa8.54□□□□□ -1.04
CDK5RAP3-219ENST00000580670 C1orf137Q5JT78 98 aa8.54□□□□□ -1.04
CDK5RAP3-219ENST00000580670 CYSTM1Q9H1C7 97 aa8.54□□□□□ -1.04
CDK5RAP3-219ENST00000580670 Q9BRP9 147 aa8.53□□□□□ -1.04
CDK5RAP3-219ENST00000580670 DHRS4-AS1Q9P1J3 65 aa8.53□□□□□ -1.04
CDK5RAP3-219ENST00000580670 H0Y9J4 135 aa8.51□□□□□ -1.05
CDK5RAP3-219ENST00000580670 LOC110117498A0A087WWA1 95 aa8.5□□□□□ -1.05
CDK5RAP3-219ENST00000580670 KRTAP13-1Q8IUC0 172 aa8.5□□□□□ -1.05
CDK5RAP3-219ENST00000580670 HIGD2AQ9BW72 106 aa8.5□□□□□ -1.05
CDK5RAP3-219ENST00000580670 H3BQ85 93 aa8.49□□□□□ -1.05
CDK5RAP3-219ENST00000580670 Q6ZQY7 126 aa8.49□□□□□ -1.05
CDK5RAP3-219ENST00000580670 UBL5Q9BZL1 73 aa8.49□□□□□ -1.05
CDK5RAP3-219ENST00000580670 ERC2-IT1O76042 136 aa8.48□□□□□ -1.05
CDK5RAP3-219ENST00000580670 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.48□□□□□ -1.05
CDK5RAP3-219ENST00000580670 APOBP04114 4563 aaKnown RBP8.48□□□□□ -1.05
CDK5RAP3-219ENST00000580670 Q6ZQT0 140 aa8.48□□□□□ -1.05
CDK5RAP3-219ENST00000580670 GHRHP01286 108 aa8.47□□□□□ -1.05
CDK5RAP3-219ENST00000580670 SMR3BP02814 79 aaPredicted RBP8.47□□□□□ -1.05
CDK5RAP3-219ENST00000580670 IGLV7-43P04211 117 aa8.47□□□□□ -1.05
CDK5RAP3-219ENST00000580670 C5orf47Q569G3 176 aa8.47□□□□□ -1.05
CDK5RAP3-219ENST00000580670 RBM3P98179 157 aaKnown RBP8.46□□□□□ -1.05
CDK5RAP3-219ENST00000580670 ZNF861PO60384 105 aa8.45□□□□□ -1.06
CDK5RAP3-219ENST00000580670 PDE6GP18545 87 aa8.45□□□□□ -1.06
CDK5RAP3-219ENST00000580670 ST20-AS1Q8NBB2 130 aa8.45□□□□□ -1.06
CDK5RAP3-219ENST00000580670 CDK2AP2O75956 126 aa8.44□□□□□ -1.06
CDK5RAP3-219ENST00000580670 RPL37AP61513 92 aaKnown RBP8.44□□□□□ -1.06
CDK5RAP3-219ENST00000580670 DEFB105AQ8NG35 78 aa8.44□□□□□ -1.06
CDK5RAP3-219ENST00000580670 SRRM2Q9UQ35 2752 aaKnown RBP8.42□□□□□ -1.06
CDK5RAP3-219ENST00000580670 TRAV7A0A075B6U4 112 aa8.41□□□□□ -1.06
CDK5RAP3-219ENST00000580670 OXTP01178 125 aa8.41□□□□□ -1.06
CDK5RAP3-219ENST00000580670 VPS13BQ7Z7G8 4022 aa8.41□□□□□ -1.06
CDK5RAP3-219ENST00000580670 LINC01547P58512 204 aaPredicted RBP8.4□□□□□ -1.06
CDK5RAP3-219ENST00000580670 IGLV5-48A0A075B6I7 105 aa8.4□□□□□ -1.07
CDK5RAP3-219ENST00000580670 CXCL6P80162 114 aa8.4□□□□□ -1.07
CDK5RAP3-219ENST00000580670 Q8N377 158 aa8.4□□□□□ -1.07
CDK5RAP3-219ENST00000580670 DSCR8Q96T75 97 aa8.4□□□□□ -1.07
CDK5RAP3-219ENST00000580670 EPPK1P58107 5090 aaKnown RBP8.39□□□□□ -1.07
CDK5RAP3-219ENST00000580670 Q6ZVQ6 151 aa8.39□□□□□ -1.07
CDK5RAP3-219ENST00000580670 LAMTOR3Q9UHA4 124 aa8.38□□□□□ -1.07
CDK5RAP3-219ENST00000580670 SPRR4Q96PI1 79 aa8.37□□□□□ -1.07
CDK5RAP3-219ENST00000580670 ZNF706Q9Y5V0 76 aaPredicted RBP8.37□□□□□ -1.07
CDK5RAP3-219ENST00000580670 KLKP1Q107X0 134 aa8.36□□□□□ -1.07
CDK5RAP3-219ENST00000580670 C20orf197Q8N268 126 aa8.36□□□□□ -1.07
CDK5RAP3-219ENST00000580670 TRBV7-4A0A0J9YYF1 115 aa8.35□□□□□ -1.07
CDK5RAP3-219ENST00000580670 FAM229AH3BQW9 127 aa8.35□□□□□ -1.07
CDK5RAP3-219ENST00000580670 Q5XG85 94 aa8.35□□□□□ -1.07
CDK5RAP3-219ENST00000580670 HSPG2P98160 4391 aa8.34□□□□□ -1.07
CDK5RAP3-219ENST00000580670 H7BZZ5 65 aa8.34□□□□□ -1.07
CDK5RAP3-219ENST00000580670 PLA2G1BP04054 148 aaKnown RBP8.34□□□□□ -1.07
CDK5RAP3-219ENST00000580670 SPRR1BP22528 89 aa8.34□□□□□ -1.07
CDK5RAP3-219ENST00000580670 KRTAP10-4P60372 401 aaPredicted RBP8.34□□□□□ -1.07
CDK5RAP3-219ENST00000580670 FAM236DA0A1B0GTK5 79 aa8.33□□□□□ -1.08
CDK5RAP3-219ENST00000580670 FAM236CP0DP71 79 aa8.33□□□□□ -1.08
CDK5RAP3-219ENST00000580670 RYR1P21817 5038 aa8.33□□□□□ -1.08
CDK5RAP3-219ENST00000580670 SMIM29Q86T20 159 aa8.33□□□□□ -1.08
CDK5RAP3-219ENST00000580670 SERP1Q9Y6X1 66 aa8.33□□□□□ -1.08
CDK5RAP3-219ENST00000580670 FAT1Q14517 4588 aa8.32□□□□□ -1.08
CDK5RAP3-219ENST00000580670 LINC00483Q53H64 154 aa8.32□□□□□ -1.08
CDK5RAP3-219ENST00000580670 SPINK6Q6UWN8 80 aa8.32□□□□□ -1.08
CDK5RAP3-219ENST00000580670 Q5VSD8 79 aa8.31□□□□□ -1.08
CDK5RAP3-219ENST00000580670 ANAPC11Q9NYG5 84 aa8.3□□□□□ -1.08
CDK5RAP3-219ENST00000580670 F8WEM9 126 aa8.3□□□□□ -1.08
CDK5RAP3-219ENST00000580670 NDUFC1O43677 76 aa8.29□□□□□ -1.08
CDK5RAP3-219ENST00000580670 C4orf26Q17RF5 130 aa8.29□□□□□ -1.08
CDK5RAP3-219ENST00000580670 KIAA1109Q2LD37 5005 aa8.28□□□□□ -1.08
CDK5RAP3-219ENST00000580670 Q8N1X5 172 aa8.26□□□□□ -1.09
CDK5RAP3-219ENST00000580670 KRTAP17-1Q9BYP8 105 aa8.26□□□□□ -1.09
CDK5RAP3-219ENST00000580670 IGLV9-49A0A0B4J1Y8 123 aa8.25□□□□□ -1.09
CDK5RAP3-219ENST00000580670 KRTAP1-4P0C5Y4 121 aa8.25□□□□□ -1.09
CDK5RAP3-219ENST00000580670 ATP5EP56381 51 aaPredicted RBP8.24□□□□□ -1.09
CDK5RAP3-219ENST00000580670 IGLV8-61A0A075B6I0 122 aa8.23□□□□□ -1.09
CDK5RAP3-219ENST00000580670 HRCT1Q6UXD1 115 aa8.23□□□□□ -1.09
CDK5RAP3-219ENST00000580670 FAM229BQ4G0N7 80 aa8.22□□□□□ -1.09
CDK5RAP3-219ENST00000580670 PKHD1L1Q86WI1 4243 aa8.22□□□□□ -1.09
CDK5RAP3-219ENST00000580670 MOBPQ13875 183 aa8.21□□□□□ -1.1
CDK5RAP3-219ENST00000580670 SNURFQ9Y675 71 aa8.21□□□□□ -1.1
CDK5RAP3-219ENST00000580670 A0A087X002 238 aa8.2□□□□□ -1.1
CDK5RAP3-219ENST00000580670 SMIM26A0A096LP01 95 aa8.2□□□□□ -1.1
CDK5RAP3-219ENST00000580670 NREPQ16612 68 aa8.2□□□□□ -1.1
CDK5RAP3-219ENST00000580670 A0A0G2JQZ4 141 aa8.2□□□□□ -1.1
CDK5RAP3-219ENST00000580670 IGFL1Q6UW32 110 aa8.2□□□□□ -1.1
CDK5RAP3-219ENST00000580670 Q8NBF4 154 aa8.2□□□□□ -1.1
CDK5RAP3-219ENST00000580670 A0A1B0GW54 56 aa8.19□□□□□ -1.1
CDK5RAP3-219ENST00000580670 BPY2O14599 106 aa8.19□□□□□ -1.1
CDK5RAP3-219ENST00000580670 IGKV4-1P06312 121 aa8.18□□□□□ -1.1
CDK5RAP3-219ENST00000580670 BIRC6Q9NR09 4857 aa8.18□□□□□ -1.1
CDK5RAP3-219ENST00000580670 KRTAP13-2Q52LG2 175 aa8.17□□□□□ -1.1
CDK5RAP3-219ENST00000580670 TMEM254Q8TBM7 123 aa8.17□□□□□ -1.1
CDK5RAP3-219ENST00000580670 OCR1Q9BZK8 76 aa8.16□□□□□ -1.1
CDK5RAP3-219ENST00000580670 A0A0U1RQV1 116 aa8.15□□□□□ -1.11
CDK5RAP3-219ENST00000580670 A0A1W2PNM2 257 aa8.15□□□□□ -1.11
CDK5RAP3-219ENST00000580670 FP248Q71RG6 208 aaPredicted RBP8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms