RNA–Protein interactions for RNA: ENST00000580569.1

RFFL-207, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene RFFL, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-207ENST00000580569 XP32Q5T750 250 aa4.96□□□□□ -1.62
RFFL-207ENST00000580569 MRPL55Q7Z7F7 128 aaKnown RBP4.96□□□□□ -1.62
RFFL-207ENST00000580569 LINC00643Q86TS7 51 aa4.96□□□□□ -1.62
RFFL-207ENST00000580569 HMCN2Q8NDA2 5059 aa4.95□□□□□ -1.62
RFFL-207ENST00000580569 RPL37AP8A6NKH3 93 aa4.95□□□□□ -1.62
RFFL-207ENST00000580569 Q6ZQT0 140 aa4.95□□□□□ -1.62
RFFL-207ENST00000580569 Q6ZRX8 168 aa4.95□□□□□ -1.62
RFFL-207ENST00000580569 Q9BRP9 147 aa4.95□□□□□ -1.62
RFFL-207ENST00000580569 LINC00846Q9NV44 126 aa4.95□□□□□ -1.62
RFFL-207ENST00000580569 TRBV7-4A0A0J9YYF1 115 aa4.94□□□□□ -1.62
RFFL-207ENST00000580569 RBM3P98179 157 aaKnown RBP4.94□□□□□ -1.62
RFFL-207ENST00000580569 FAM19A5Q7Z5A7 132 aaPredicted RBP4.94□□□□□ -1.62
RFFL-207ENST00000580569 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.93□□□□□ -1.62
RFFL-207ENST00000580569 NDUFV3P56181 108 aaKnown RBP4.93□□□□□ -1.62
RFFL-207ENST00000580569 Q8N377 158 aa4.93□□□□□ -1.62
RFFL-207ENST00000580569 IMUPQ9GZP8 106 aa4.93□□□□□ -1.62
RFFL-207ENST00000580569 IGLV5-48A0A075B6I7 105 aa4.92□□□□□ -1.62
RFFL-207ENST00000580569 A0A1B0GV72 72 aa4.92□□□□□ -1.62
RFFL-207ENST00000580569 KRTAP10-2P60368 255 aa4.92□□□□□ -1.62
RFFL-207ENST00000580569 Q5VSD8 79 aa4.92□□□□□ -1.62
RFFL-207ENST00000580569 KRTAP11-1Q8IUC1 163 aa4.92□□□□□ -1.62
RFFL-207ENST00000580569 DHRS4-AS1Q9P1J3 65 aa4.92□□□□□ -1.62
RFFL-207ENST00000580569 A0A087WTM6 91 aa4.91□□□□□ -1.62
RFFL-207ENST00000580569 IGLV9-49A0A0B4J1Y8 123 aa4.91□□□□□ -1.62
RFFL-207ENST00000580569 PANO1I0J062 215 aa4.91□□□□□ -1.62
RFFL-207ENST00000580569 CHTF8P0CG12 524 aa4.91□□□□□ -1.62
RFFL-207ENST00000580569 PDE6GP18545 87 aa4.91□□□□□ -1.62
RFFL-207ENST00000580569 Q6JHZ5 121 aa4.91□□□□□ -1.62
RFFL-207ENST00000580569 REG3GQ6UW15 175 aa4.91□□□□□ -1.62
RFFL-207ENST00000580569 LAMTOR3Q9UHA4 124 aa4.91□□□□□ -1.62
RFFL-207ENST00000580569 IGKV2-24A0A0C4DH68 120 aa4.9□□□□□ -1.63
RFFL-207ENST00000580569 ETDCA0A1B0GVM5 59 aa4.9□□□□□ -1.63
RFFL-207ENST00000580569 ERC2-IT1O76042 136 aa4.9□□□□□ -1.63
RFFL-207ENST00000580569 DNAH8Q96JB1 4490 aa4.89□□□□□ -1.63
RFFL-207ENST00000580569 PHF5AQ7RTV0 110 aaKnown RBP4.89□□□□□ -1.63
RFFL-207ENST00000580569 DSCR8Q96T75 97 aa4.89□□□□□ -1.63
RFFL-207ENST00000580569 PKIGQ9Y2B9 76 aa4.89□□□□□ -1.63
RFFL-207ENST00000580569 SMIM29Q86T20 159 aa4.88□□□□□ -1.63
RFFL-207ENST00000580569 ST20-AS1Q8NBB2 130 aa4.88□□□□□ -1.63
RFFL-207ENST00000580569 SPACA4Q8TDM5 124 aa4.88□□□□□ -1.63
RFFL-207ENST00000580569 H0Y9J4 135 aa4.87□□□□□ -1.63
RFFL-207ENST00000580569 HIST1H4AP62805 103 aaKnown RBP4.87□□□□□ -1.63
RFFL-207ENST00000580569 LRP1Q07954 4544 aaKnown RBP4.87□□□□□ -1.63
RFFL-207ENST00000580569 IGKV3D-7A0A0C4DH55 119 aa4.86□□□□□ -1.63
RFFL-207ENST00000580569 KRTAP29-1A8MX34 341 aaPredicted RBP4.86□□□□□ -1.63
RFFL-207ENST00000580569 KRTAP13-1Q8IUC0 172 aa4.86□□□□□ -1.63
RFFL-207ENST00000580569 LINC00474Q9P2X8 69 aa4.86□□□□□ -1.63
RFFL-207ENST00000580569 UBE2BP63146 152 aa4.85□□□□□ -1.63
RFFL-207ENST00000580569 Q6ZVQ6 151 aa4.85□□□□□ -1.63
RFFL-207ENST00000580569 DEFB105AQ8NG35 78 aa4.85□□□□□ -1.63
RFFL-207ENST00000580569 FAT3Q8TDW7 4589 aa4.85□□□□□ -1.63
RFFL-207ENST00000580569 SPRR1BP22528 89 aa4.84□□□□□ -1.63
RFFL-207ENST00000580569 FUSP35637 526 aaKnown RBP eCLIP4.84□□□□□ -1.63
RFFL-207ENST00000580569 PRLHP81277 87 aa4.84□□□□□ -1.63
RFFL-207ENST00000580569 ATP5EP2Q5VTU8 51 aa4.84□□□□□ -1.63
RFFL-207ENST00000580569 FAM19A1Q7Z5A9 133 aa4.84□□□□□ -1.63
RFFL-207ENST00000580569 C3orf22Q8N5N4 141 aa4.84□□□□□ -1.63
RFFL-207ENST00000580569 IGLV8-61A0A075B6I0 122 aa4.83□□□□□ -1.64
RFFL-207ENST00000580569 A0A1W2PNM2 257 aa4.83□□□□□ -1.64
RFFL-207ENST00000580569 UBL5Q9BZL1 73 aa4.83□□□□□ -1.64
RFFL-207ENST00000580569 FAM236AA0A1B0GUQ0 79 aa4.82□□□□□ -1.64
RFFL-207ENST00000580569 FAM236BA0A1B0GV22 79 aa4.82□□□□□ -1.64
RFFL-207ENST00000580569 A0A1B0GW54 56 aa4.82□□□□□ -1.64
RFFL-207ENST00000580569 BCE1O60756 84 aa4.82□□□□□ -1.64
RFFL-207ENST00000580569 SMR3BP02814 79 aaPredicted RBP4.82□□□□□ -1.64
RFFL-207ENST00000580569 KRTAP10-1P60331 282 aa4.82□□□□□ -1.64
RFFL-207ENST00000580569 SPRR4Q96PI1 79 aa4.82□□□□□ -1.64
RFFL-207ENST00000580569 ANAPC13Q9BS18 74 aa4.82□□□□□ -1.64
RFFL-207ENST00000580569 PLAC8Q9NZF1 115 aa4.82□□□□□ -1.64
RFFL-207ENST00000580569 RNF213Q63HN8 5207 aa4.82□□□□□ -1.64
RFFL-207ENST00000580569 CXCL6P80162 114 aa4.81□□□□□ -1.64
RFFL-207ENST00000580569 Q8NBF4 154 aa4.81□□□□□ -1.64
RFFL-207ENST00000580569 A0A087WVE0 104 aa4.8□□□□□ -1.64
RFFL-207ENST00000580569 KRTAP15-1Q3LI76 137 aa4.8□□□□□ -1.64
RFFL-207ENST00000580569 C1orf137Q5JT78 98 aa4.8□□□□□ -1.64
RFFL-207ENST00000580569 HIGD2AQ9BW72 106 aa4.79□□□□□ -1.64
RFFL-207ENST00000580569 IGFL1Q6UW32 110 aa4.78□□□□□ -1.64
RFFL-207ENST00000580569 PKHD1L1Q86WI1 4243 aa4.78□□□□□ -1.64
RFFL-207ENST00000580569 CCDC179H3BU77 68 aa4.77□□□□□ -1.65
RFFL-207ENST00000580569 CRYGAP11844 174 aa4.77□□□□□ -1.65
RFFL-207ENST00000580569 UBE2AP49459 152 aa4.77□□□□□ -1.65
RFFL-207ENST00000580569 HAMPP81172 84 aa4.77□□□□□ -1.65
RFFL-207ENST00000580569 LRP2P98164 4655 aa4.77□□□□□ -1.65
RFFL-207ENST00000580569 ATOX1O00244 68 aa4.76□□□□□ -1.65
RFFL-207ENST00000580569 PSORS1C2Q9UIG4 136 aa4.76□□□□□ -1.65
RFFL-207ENST00000580569 A0A0G2JQZ4 141 aa4.75□□□□□ -1.65
RFFL-207ENST00000580569 OXTP01178 125 aa4.75□□□□□ -1.65
RFFL-207ENST00000580569 SEC61GP60059 68 aa4.75□□□□□ -1.65
RFFL-207ENST00000580569 LINC00483Q53H64 154 aa4.75□□□□□ -1.65
RFFL-207ENST00000580569 Q6ZSA8 131 aa4.75□□□□□ -1.65
RFFL-207ENST00000580569 DPH3Q96FX2 82 aa4.75□□□□□ -1.65
RFFL-207ENST00000580569 TNXBP22105 4242 aa4.74□□□□□ -1.65
RFFL-207ENST00000580569 IGKV4-1P06312 121 aa4.74□□□□□ -1.65
RFFL-207ENST00000580569 COX7CP15954 63 aa4.74□□□□□ -1.65
RFFL-207ENST00000580569 NREPQ16612 68 aa4.74□□□□□ -1.65
RFFL-207ENST00000580569 SCXQ7RTU7 201 aa4.74□□□□□ -1.65
RFFL-207ENST00000580569 F8WEM9 126 aa4.73□□□□□ -1.65
RFFL-207ENST00000580569 UQCRQO14949 82 aa4.72□□□□□ -1.65
RFFL-207ENST00000580569 ZNF861PO60384 105 aa4.72□□□□□ -1.65
RFFL-207ENST00000580569 DSCR10P59022 87 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms