RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 IGKV4-1P06312 121 aa6.66□□□□□ -1.34
TOP3A-209ENST00000580095 IGLV5-48A0A075B6I7 105 aa6.66□□□□□ -1.34
TOP3A-209ENST00000580095 SPRR1AP35321 89 aa6.66□□□□□ -1.34
TOP3A-209ENST00000580095 KTN1-AS1Q86SY8 53 aa6.66□□□□□ -1.34
TOP3A-209ENST00000580095 UBE2DNLQ8IWF7 75 aa6.66□□□□□ -1.34
TOP3A-209ENST00000580095 H3BS24 57 aa6.65□□□□□ -1.34
TOP3A-209ENST00000580095 REG3GQ6UW15 175 aa6.65□□□□□ -1.34
TOP3A-209ENST00000580095 HIGD2AQ9BW72 106 aa6.65□□□□□ -1.34
TOP3A-209ENST00000580095 PLA2G2DQ9UNK4 145 aa6.65□□□□□ -1.34
TOP3A-209ENST00000580095 DEFB116Q30KQ4 102 aa6.65□□□□□ -1.35
TOP3A-209ENST00000580095 IGLV5-37A0A075B6J1 123 aa6.64□□□□□ -1.35
TOP3A-209ENST00000580095 FUSP35637 526 aaKnown RBP eCLIP6.64□□□□□ -1.35
TOP3A-209ENST00000580095 KRTAP11-1Q8IUC1 163 aa6.64□□□□□ -1.35
TOP3A-209ENST00000580095 Q1T7F1 81 aa6.63□□□□□ -1.35
TOP3A-209ENST00000580095 MDFIQ99750 246 aa6.63□□□□□ -1.35
TOP3A-209ENST00000580095 TMEM254Q8TBM7 123 aa6.62□□□□□ -1.35
TOP3A-209ENST00000580095 TNP2Q05952 138 aa6.62□□□□□ -1.35
TOP3A-209ENST00000580095 PHF5AQ7RTV0 110 aaKnown RBP6.62□□□□□ -1.35
TOP3A-209ENST00000580095 PSPHP1O15172 72 aa6.61□□□□□ -1.35
TOP3A-209ENST00000580095 SMIM29Q86T20 159 aa6.61□□□□□ -1.35
TOP3A-209ENST00000580095 LRCOL1A6NCL2 159 aa6.6□□□□□ -1.35
TOP3A-209ENST00000580095 LINC00476Q8WZB0 136 aa6.6□□□□□ -1.35
TOP3A-209ENST00000580095 Q8NBF4 154 aa6.6□□□□□ -1.35
TOP3A-209ENST00000580095 FAM30AQ9NZY2 134 aa6.6□□□□□ -1.35
TOP3A-209ENST00000580095 hDV103S1A0JD37 113 aa6.59□□□□□ -1.35
TOP3A-209ENST00000580095 C16orf90A8MZG2 172 aa6.59□□□□□ -1.35
TOP3A-209ENST00000580095 PLECQ15149 4684 aaKnown RBP6.59□□□□□ -1.35
TOP3A-209ENST00000580095 C8orf87E5RJ46 101 aa6.59□□□□□ -1.36
TOP3A-209ENST00000580095 APLNQ9ULZ1 77 aa6.58□□□□□ -1.36
TOP3A-209ENST00000580095 PANO1I0J062 215 aa6.58□□□□□ -1.36
TOP3A-209ENST00000580095 K7EQZ3 153 aa6.58□□□□□ -1.36
TOP3A-209ENST00000580095 TRAV22A0A0B4J277 110 aa6.57□□□□□ -1.36
TOP3A-209ENST00000580095 IGFL1Q6UW32 110 aa6.57□□□□□ -1.36
TOP3A-209ENST00000580095 TGP01266 2768 aa6.56□□□□□ -1.36
TOP3A-209ENST00000580095 DSCR10P59022 87 aa6.56□□□□□ -1.36
TOP3A-209ENST00000580095 OCR1Q9BZK8 76 aa6.56□□□□□ -1.36
TOP3A-209ENST00000580095 A0A087WSZ3 146 aa6.55□□□□□ -1.36
TOP3A-209ENST00000580095 CNBPP62633 177 aaKnown RBP6.55□□□□□ -1.36
TOP3A-209ENST00000580095 MEGF8Q7Z7M0 2845 aa6.54□□□□□ -1.36
TOP3A-209ENST00000580095 RPL37AP61513 92 aaKnown RBP6.54□□□□□ -1.36
TOP3A-209ENST00000580095 SPRR4Q96PI1 79 aa6.54□□□□□ -1.36
TOP3A-209ENST00000580095 UBE2AP49459 152 aa6.53□□□□□ -1.36
TOP3A-209ENST00000580095 A8MUN3 132 aa6.53□□□□□ -1.36
TOP3A-209ENST00000580095 PRKDCP78527 4128 aaKnown RBP6.52□□□□□ -1.37
TOP3A-209ENST00000580095 C1orf64Q8NEQ6 169 aa6.52□□□□□ -1.37
TOP3A-209ENST00000580095 STARD9Q9P2P6 4700 aa6.52□□□□□ -1.37
TOP3A-209ENST00000580095 WFDC13Q8IUB5 93 aa6.51□□□□□ -1.37
TOP3A-209ENST00000580095 NBDYA0A0U1RRE5 68 aa6.5□□□□□ -1.37
TOP3A-209ENST00000580095 A6NN06 94 aa6.5□□□□□ -1.37
TOP3A-209ENST00000580095 Q5VV11 94 aa6.5□□□□□ -1.37
TOP3A-209ENST00000580095 NDUFS5O43920 106 aa6.49□□□□□ -1.37
TOP3A-209ENST00000580095 C9orf163Q8N9P6 203 aa6.49□□□□□ -1.37
TOP3A-209ENST00000580095 B9D2Q9BPU9 175 aa6.49□□□□□ -1.37
TOP3A-209ENST00000580095 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.49□□□□□ -1.37
TOP3A-209ENST00000580095 KMT2AQ03164 3969 aa6.48□□□□□ -1.37
TOP3A-209ENST00000580095 PRR26Q8N8Z3 221 aa6.47□□□□□ -1.37
TOP3A-209ENST00000580095 C14orf177Q52M58 125 aa6.47□□□□□ -1.37
TOP3A-209ENST00000580095 Q6ZRN7 208 aaPredicted RBP6.46□□□□□ -1.37
TOP3A-209ENST00000580095 SPTSSBQ8NFR3 76 aa6.46□□□□□ -1.37
TOP3A-209ENST00000580095 PRR4Q16378 134 aa6.46□□□□□ -1.38
TOP3A-209ENST00000580095 HCG22E2RYF7 251 aa6.46□□□□□ -1.38
TOP3A-209ENST00000580095 A0A1B0GW54 56 aa6.45□□□□□ -1.38
TOP3A-209ENST00000580095 IGLV9-49A0A0B4J1Y8 123 aa6.45□□□□□ -1.38
TOP3A-209ENST00000580095 FRAS1Q86XX4 4008 aa6.45□□□□□ -1.38
TOP3A-209ENST00000580095 ANAPC11Q9NYG5 84 aa6.44□□□□□ -1.38
TOP3A-209ENST00000580095 DYNC2H1Q8NCM8 4307 aaKnown RBP6.44□□□□□ -1.38
TOP3A-209ENST00000580095 LCA10Q71F78 164 aa6.43□□□□□ -1.38
TOP3A-209ENST00000580095 DNHD1Q96M86 4753 aa6.43□□□□□ -1.38
TOP3A-209ENST00000580095 IGLV8-61A0A075B6I0 122 aa6.43□□□□□ -1.38
TOP3A-209ENST00000580095 C7orf65Q6ZTY9 151 aa6.43□□□□□ -1.38
TOP3A-209ENST00000580095 ATP11AUNQ6ZP68 121 aa6.42□□□□□ -1.38
TOP3A-209ENST00000580095 NUPR2A6NF83 97 aa6.42□□□□□ -1.38
TOP3A-209ENST00000580095 FBN3Q75N90 2809 aa6.41□□□□□ -1.38
TOP3A-209ENST00000580095 CHKB-CPT1BH3BT56 60 aa6.4□□□□□ -1.38
TOP3A-209ENST00000580095 DNAH2Q9P225 4427 aa6.39□□□□□ -1.39
TOP3A-209ENST00000580095 A0A087WTM6 91 aa6.39□□□□□ -1.39
TOP3A-209ENST00000580095 H0Y9J4 135 aa6.39□□□□□ -1.39
TOP3A-209ENST00000580095 SPACA4Q8TDM5 124 aa6.39□□□□□ -1.39
TOP3A-209ENST00000580095 HECTD4Q9Y4D8 3996 aa6.39□□□□□ -1.39
TOP3A-209ENST00000580095 KRTAP13-1Q8IUC0 172 aa6.38□□□□□ -1.39
TOP3A-209ENST00000580095 VPS13DQ5THJ4 4388 aa6.38□□□□□ -1.39
TOP3A-209ENST00000580095 SPRR1BP22528 89 aa6.38□□□□□ -1.39
TOP3A-209ENST00000580095 CYP4F30PQ9H0H9 118 aa6.37□□□□□ -1.39
TOP3A-209ENST00000580095 LCE6AA0A183 80 aa6.37□□□□□ -1.39
TOP3A-209ENST00000580095 CASC2Q6XLA1 102 aa6.37□□□□□ -1.39
TOP3A-209ENST00000580095 LINC00472Q9H8W2 130 aa6.37□□□□□ -1.39
TOP3A-209ENST00000580095 RTL8CO15255 209 aa6.36□□□□□ -1.39
TOP3A-209ENST00000580095 ZCCHC13Q8WW36 166 aaKnown RBP6.36□□□□□ -1.39
TOP3A-209ENST00000580095 LINC00208Q96KT6 92 aa6.36□□□□□ -1.39
TOP3A-209ENST00000580095 PSORS1C2Q9UIG4 136 aa6.36□□□□□ -1.39
TOP3A-209ENST00000580095 KRTAP29-1A8MX34 341 aaPredicted RBP6.35□□□□□ -1.39
TOP3A-209ENST00000580095 A8MWP4 228 aa6.34□□□□□ -1.39
TOP3A-209ENST00000580095 Q8N9P0 234 aaPredicted RBP6.34□□□□□ -1.39
TOP3A-209ENST00000580095 MOBPQ13875 183 aa6.33□□□□□ -1.4
TOP3A-209ENST00000580095 PRR15LQ9BU68 103 aa6.33□□□□□ -1.4
TOP3A-209ENST00000580095 DNAH8Q96JB1 4490 aa6.33□□□□□ -1.4
TOP3A-209ENST00000580095 DNAH6Q9C0G6 4158 aa6.33□□□□□ -1.4
TOP3A-209ENST00000580095 H0Y9P7 68 aa6.31□□□□□ -1.4
TOP3A-209ENST00000580095 MP68P56378 58 aa6.31□□□□□ -1.4
TOP3A-209ENST00000580095 DNAH17Q9UFH2 4485 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms