RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 VAMP3Q15836 100 aa4.36□□□□□ -1.71
CASC3-206ENST00000579238 LINC00575Q6W349 94 aa4.36□□□□□ -1.71
CASC3-206ENST00000579238 Q96NJ1 140 aa4.36□□□□□ -1.71
CASC3-206ENST00000579238 USH2AO75445 5202 aa4.36□□□□□ -1.71
CASC3-206ENST00000579238 C3orf79P0CE67 100 aa4.35□□□□□ -1.71
CASC3-206ENST00000579238 OCIAD2Q56VL3 154 aa4.35□□□□□ -1.71
CASC3-206ENST00000579238 Q6ZQY7 126 aa4.35□□□□□ -1.71
CASC3-206ENST00000579238 C20orf166-AS1Q96NR2 134 aa4.35□□□□□ -1.71
CASC3-206ENST00000579238 hADV29S1A0JD25 119 aa4.34□□□□□ -1.71
CASC3-206ENST00000579238 LST1O00453 97 aa4.34□□□□□ -1.71
CASC3-206ENST00000579238 HIST1H2BKO60814 126 aa4.34□□□□□ -1.71
CASC3-206ENST00000579238 HIST1H2BJP06899 126 aa4.34□□□□□ -1.71
CASC3-206ENST00000579238 HIST1H2BOP23527 126 aa4.34□□□□□ -1.71
CASC3-206ENST00000579238 HIST1H2BBP33778 126 aa4.34□□□□□ -1.71
CASC3-206ENST00000579238 HIST1H2BDP58876 126 aa4.34□□□□□ -1.71
CASC3-206ENST00000579238 HIST1H2BCP62807 126 aa4.34□□□□□ -1.71
CASC3-206ENST00000579238 HIST2H2BEQ16778 126 aa4.34□□□□□ -1.71
CASC3-206ENST00000579238 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.34□□□□□ -1.71
CASC3-206ENST00000579238 HIST1H2BHQ93079 126 aa4.34□□□□□ -1.71
CASC3-206ENST00000579238 HIST1H2BNQ99877 126 aa4.34□□□□□ -1.71
CASC3-206ENST00000579238 HIST1H2BMQ99879 126 aa4.34□□□□□ -1.71
CASC3-206ENST00000579238 FCGBPQ9Y6R7 5405 aaPredicted RBP4.33□□□□□ -1.72
CASC3-206ENST00000579238 A8MUU9 505 aa4.33□□□□□ -1.72
CASC3-206ENST00000579238 MT2AP02795 61 aa4.33□□□□□ -1.72
CASC3-206ENST00000579238 ANKRD39Q53RE8 183 aa4.33□□□□□ -1.72
CASC3-206ENST00000579238 KRTAP19-1Q8IUB9 90 aa4.33□□□□□ -1.72
CASC3-206ENST00000579238 KRTDAPP60985 99 aa4.32□□□□□ -1.72
CASC3-206ENST00000579238 LCE2BO14633 110 aa4.31□□□□□ -1.72
CASC3-206ENST00000579238 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.31□□□□□ -1.72
CASC3-206ENST00000579238 PPDPFLQ8WWR9 84 aa4.31□□□□□ -1.72
CASC3-206ENST00000579238 SCGB1D1O95968 90 aa4.3□□□□□ -1.72
CASC3-206ENST00000579238 SNHG12Q9BXW3 62 aa4.3□□□□□ -1.72
CASC3-206ENST00000579238 SS18L2Q9UHA2 77 aa4.3□□□□□ -1.72
CASC3-206ENST00000579238 H3BUT2 72 aa4.29□□□□□ -1.72
CASC3-206ENST00000579238 MT1FP04733 61 aa4.29□□□□□ -1.72
CASC3-206ENST00000579238 ATOH7Q8N100 152 aa4.29□□□□□ -1.72
CASC3-206ENST00000579238 KRTAP9-3Q9BYQ3 159 aa4.29□□□□□ -1.72
CASC3-206ENST00000579238 MACF1Q9UPN3 7388 aaKnown RBP4.29□□□□□ -1.72
CASC3-206ENST00000579238 FAM236DA0A1B0GTK5 79 aa4.28□□□□□ -1.72
CASC3-206ENST00000579238 FAM236CP0DP71 79 aa4.28□□□□□ -1.72
CASC3-206ENST00000579238 KRTAP10-10P60014 251 aa4.28□□□□□ -1.72
CASC3-206ENST00000579238 COA6Q5JTJ3 125 aaKnown RBP4.28□□□□□ -1.72
CASC3-206ENST00000579238 SNRPEP62304 92 aaKnown RBP4.26□□□□□ -1.73
CASC3-206ENST00000579238 BVES-AS1Q5T3Y7 98 aa4.26□□□□□ -1.73
CASC3-206ENST00000579238 TEN1Q86WV5 123 aa4.26□□□□□ -1.73
CASC3-206ENST00000579238 DSCR10P59022 87 aa4.25□□□□□ -1.73
CASC3-206ENST00000579238 RBM12B-AS1Q9P1G2 102 aa4.25□□□□□ -1.73
CASC3-206ENST00000579238 A0A087WSZ3 146 aa4.24□□□□□ -1.73
CASC3-206ENST00000579238 KRTAP16-1A8MUX0 517 aa4.24□□□□□ -1.73
CASC3-206ENST00000579238 MPLKIPQ8TAP9 179 aa4.24□□□□□ -1.73
CASC3-206ENST00000579238 LINC00846Q9NV44 126 aa4.24□□□□□ -1.73
CASC3-206ENST00000579238 HRES1P13985 223 aa4.23□□□□□ -1.73
CASC3-206ENST00000579238 C12orf57Q99622 126 aa4.23□□□□□ -1.73
CASC3-206ENST00000579238 SYNE2Q8WXH0 6885 aaKnown RBP4.22□□□□□ -1.73
CASC3-206ENST00000579238 NDUFV3P56181 108 aaKnown RBP4.22□□□□□ -1.73
CASC3-206ENST00000579238 LINC00313P59037 77 aa4.22□□□□□ -1.73
CASC3-206ENST00000579238 SIGMAR1Q99720 223 aa4.22□□□□□ -1.73
CASC3-206ENST00000579238 SNCGO76070 127 aa4.21□□□□□ -1.74
CASC3-206ENST00000579238 A6NJY4 79 aa4.2□□□□□ -1.74
CASC3-206ENST00000579238 HSBP1L1C9JCN9 74 aa4.2□□□□□ -1.74
CASC3-206ENST00000579238 KRTAP19-6Q3LI70 58 aa4.2□□□□□ -1.74
CASC3-206ENST00000579238 NOTCH2NLQ7Z3S9 236 aa4.2□□□□□ -1.74
CASC3-206ENST00000579238 H3BMG7 143 aa4.19□□□□□ -1.74
CASC3-206ENST00000579238 A0A1W2PNM2 257 aa4.18□□□□□ -1.74
CASC3-206ENST00000579238 H0YGX0 51 aa4.18□□□□□ -1.74
CASC3-206ENST00000579238 IGKV4-1P06312 121 aa4.18□□□□□ -1.74
CASC3-206ENST00000579238 HIST1H4GQ99525 98 aa4.18□□□□□ -1.74
CASC3-206ENST00000579238 GHRHP01286 108 aa4.17□□□□□ -1.74
CASC3-206ENST00000579238 MTURNQ8N3F0 131 aa4.17□□□□□ -1.74
CASC3-206ENST00000579238 FAM218AQ96MZ4 157 aa4.17□□□□□ -1.74
CASC3-206ENST00000579238 A0A1B0GX51 115 aa4.15□□□□□ -1.75
CASC3-206ENST00000579238 FABP2P12104 132 aa4.15□□□□□ -1.75
CASC3-206ENST00000579238 RAB37Q96AX2 223 aa4.15□□□□□ -1.75
CASC3-206ENST00000579238 TRBV7-4A0A0J9YYF1 115 aa4.14□□□□□ -1.75
CASC3-206ENST00000579238 KRTAP6-3Q3LI67 103 aa4.14□□□□□ -1.75
CASC3-206ENST00000579238 IGHV6-1A0A0B4J1U7 121 aa4.13□□□□□ -1.75
CASC3-206ENST00000579238 A0A0B4J2C4 111 aa4.13□□□□□ -1.75
CASC3-206ENST00000579238 S100A2P29034 98 aa4.13□□□□□ -1.75
CASC3-206ENST00000579238 HIST3H2BBQ8N257 126 aa4.13□□□□□ -1.75
CASC3-206ENST00000579238 ANKRD29Q8N6D5 301 aa4.13□□□□□ -1.75
CASC3-206ENST00000579238 HIST1H2BLQ99880 126 aa4.13□□□□□ -1.75
CASC3-206ENST00000579238 LINC00472Q9H8W2 130 aa4.13□□□□□ -1.75
CASC3-206ENST00000579238 A8MWP4 228 aa4.12□□□□□ -1.75
CASC3-206ENST00000579238 COX8AP10176 69 aa4.12□□□□□ -1.75
CASC3-206ENST00000579238 DEFB116Q30KQ4 102 aa4.12□□□□□ -1.75
CASC3-206ENST00000579238 C8orf87E5RJ46 101 aa4.11□□□□□ -1.75
CASC3-206ENST00000579238 DLEU1O43261 78 aa4.11□□□□□ -1.75
CASC3-206ENST00000579238 C21orf62-AS1Q17RA5 79 aa4.11□□□□□ -1.75
CASC3-206ENST00000579238 S100A1P23297 94 aa4.1□□□□□ -1.75
CASC3-206ENST00000579238 SPINK7P58062 85 aa4.1□□□□□ -1.75
CASC3-206ENST00000579238 ZCCHC13Q8WW36 166 aaKnown RBP4.1□□□□□ -1.75
CASC3-206ENST00000579238 A0A1B0GVX0 72 aa4.09□□□□□ -1.75
CASC3-206ENST00000579238 H3BQ85 93 aa4.09□□□□□ -1.75
CASC3-206ENST00000579238 TRACP01848 142 aa4.09□□□□□ -1.75
CASC3-206ENST00000579238 SVIPQ8NHG7 77 aa4.09□□□□□ -1.75
CASC3-206ENST00000579238 A0A1B0GV72 72 aa4.08□□□□□ -1.76
CASC3-206ENST00000579238 CCKP06307 115 aa4.08□□□□□ -1.76
CASC3-206ENST00000579238 Q8N9P0 234 aaPredicted RBP4.08□□□□□ -1.76
CASC3-206ENST00000579238 HIGD1BQ9P298 99 aa4.08□□□□□ -1.76
CASC3-206ENST00000579238 PRO1854Q9UHT4 67 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms