RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 A4D1N5 150 aa4.69□□□□□ -1.66
GGA3-207ENST00000578896 Q6Q795 121 aa4.69□□□□□ -1.66
GGA3-207ENST00000578896 NHP2Q9NX24 153 aaKnown RBP4.69□□□□□ -1.66
GGA3-207ENST00000578896 F8WEM9 126 aa4.68□□□□□ -1.66
GGA3-207ENST00000578896 IGFL1Q6UW32 110 aa4.68□□□□□ -1.66
GGA3-207ENST00000578896 LINC00575Q6W349 94 aa4.68□□□□□ -1.66
GGA3-207ENST00000578896 Q6ZQY7 126 aa4.68□□□□□ -1.66
GGA3-207ENST00000578896 OBSCN-AS1Q96MR7 158 aa4.67□□□□□ -1.66
GGA3-207ENST00000578896 TRBV7-7A0A0K0K1E9 115 aa4.66□□□□□ -1.66
GGA3-207ENST00000578896 hADV29S1A0JD25 119 aa4.66□□□□□ -1.66
GGA3-207ENST00000578896 VAMP3Q15836 100 aa4.66□□□□□ -1.66
GGA3-207ENST00000578896 C12orf57Q99622 126 aa4.66□□□□□ -1.66
GGA3-207ENST00000578896 SSPOA2VEC9 5147 aa4.65□□□□□ -1.66
GGA3-207ENST00000578896 H3BUT2 72 aa4.65□□□□□ -1.67
GGA3-207ENST00000578896 OCIAD2Q56VL3 154 aa4.65□□□□□ -1.67
GGA3-207ENST00000578896 USH2AO75445 5202 aa4.65□□□□□ -1.67
GGA3-207ENST00000578896 Q6JHZ5 121 aa4.64□□□□□ -1.67
GGA3-207ENST00000578896 CLEC2BQ92478 149 aa4.64□□□□□ -1.67
GGA3-207ENST00000578896 ATP11AUNQ6ZP68 121 aa4.63□□□□□ -1.67
GGA3-207ENST00000578896 Q96NJ1 140 aa4.63□□□□□ -1.67
GGA3-207ENST00000578896 SNHG12Q9BXW3 62 aa4.62□□□□□ -1.67
GGA3-207ENST00000578896 LST1O00453 97 aa4.61□□□□□ -1.67
GGA3-207ENST00000578896 SNRPEP62304 92 aaKnown RBP4.61□□□□□ -1.67
GGA3-207ENST00000578896 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.61□□□□□ -1.67
GGA3-207ENST00000578896 Q75L30 129 aa4.61□□□□□ -1.67
GGA3-207ENST00000578896 HIST3H2BBQ8N257 126 aa4.61□□□□□ -1.67
GGA3-207ENST00000578896 HIST1H2BLQ99880 126 aa4.61□□□□□ -1.67
GGA3-207ENST00000578896 HSBP1L1C9JCN9 74 aa4.6□□□□□ -1.67
GGA3-207ENST00000578896 S100A2P29034 98 aa4.59□□□□□ -1.67
GGA3-207ENST00000578896 HIST1H4GQ99525 98 aa4.59□□□□□ -1.67
GGA3-207ENST00000578896 BVES-AS1Q5T3Y7 98 aa4.57□□□□□ -1.68
GGA3-207ENST00000578896 FAM218AQ96MZ4 157 aa4.57□□□□□ -1.68
GGA3-207ENST00000578896 SCGB1D1O95968 90 aa4.56□□□□□ -1.68
GGA3-207ENST00000578896 CFC1P0CG37 223 aa4.56□□□□□ -1.68
GGA3-207ENST00000578896 DSCR10P59022 87 aa4.56□□□□□ -1.68
GGA3-207ENST00000578896 KRTAP9-8Q9BYQ0 159 aa4.56□□□□□ -1.68
GGA3-207ENST00000578896 A0A087WSZ3 146 aa4.55□□□□□ -1.68
GGA3-207ENST00000578896 A8MUU9 505 aa4.55□□□□□ -1.68
GGA3-207ENST00000578896 PPDPFLQ8WWR9 84 aa4.55□□□□□ -1.68
GGA3-207ENST00000578896 C20orf166-AS1Q96NR2 134 aa4.55□□□□□ -1.68
GGA3-207ENST00000578896 KRTAP16-1A8MUX0 517 aa4.54□□□□□ -1.68
GGA3-207ENST00000578896 COX8AP10176 69 aa4.54□□□□□ -1.68
GGA3-207ENST00000578896 NDUFV3P56181 108 aaKnown RBP4.54□□□□□ -1.68
GGA3-207ENST00000578896 C14orf144Q96I85 54 aa4.54□□□□□ -1.68
GGA3-207ENST00000578896 TEN1Q86WV5 123 aa4.53□□□□□ -1.68
GGA3-207ENST00000578896 RAB37Q96AX2 223 aa4.53□□□□□ -1.68
GGA3-207ENST00000578896 SS18L2Q9UHA2 77 aa4.53□□□□□ -1.68
GGA3-207ENST00000578896 FCGBPQ9Y6R7 5405 aaPredicted RBP4.52□□□□□ -1.69
GGA3-207ENST00000578896 A0A1B0GV72 72 aa4.52□□□□□ -1.69
GGA3-207ENST00000578896 H3BMG7 143 aa4.52□□□□□ -1.69
GGA3-207ENST00000578896 S100A6P06703 90 aa4.52□□□□□ -1.69
GGA3-207ENST00000578896 FABP2P12104 132 aa4.52□□□□□ -1.69
GGA3-207ENST00000578896 TRBV20-1A0A075B6N2 111 aa4.51□□□□□ -1.69
GGA3-207ENST00000578896 A0A1W2PNM2 257 aa4.51□□□□□ -1.69
GGA3-207ENST00000578896 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.51□□□□□ -1.69
GGA3-207ENST00000578896 NOTCH2NLQ7Z3S9 236 aa4.51□□□□□ -1.69
GGA3-207ENST00000578896 SIGMAR1Q99720 223 aa4.51□□□□□ -1.69
GGA3-207ENST00000578896 H0YGX0 51 aa4.5□□□□□ -1.69
GGA3-207ENST00000578896 DLEU1O43261 78 aa4.5□□□□□ -1.69
GGA3-207ENST00000578896 DEFB116Q30KQ4 102 aa4.5□□□□□ -1.69
GGA3-207ENST00000578896 PAM16Q9Y3D7 125 aa4.5□□□□□ -1.69
GGA3-207ENST00000578896 A0A0B4J2C4 111 aa4.49□□□□□ -1.69
GGA3-207ENST00000578896 KRTAP9-7A8MTY7 169 aa4.49□□□□□ -1.69
GGA3-207ENST00000578896 MT2AP02795 61 aa4.49□□□□□ -1.69
GGA3-207ENST00000578896 C2orf91Q6ZV80 131 aa4.49□□□□□ -1.69
GGA3-207ENST00000578896 FAM236DA0A1B0GTK5 79 aa4.48□□□□□ -1.69
GGA3-207ENST00000578896 SNCGO76070 127 aa4.48□□□□□ -1.69
GGA3-207ENST00000578896 IGKV4-1P06312 121 aa4.48□□□□□ -1.69
GGA3-207ENST00000578896 FAM236CP0DP71 79 aa4.48□□□□□ -1.69
GGA3-207ENST00000578896 LINC00313P59037 77 aa4.48□□□□□ -1.69
GGA3-207ENST00000578896 SPATA45Q537H7 98 aa4.48□□□□□ -1.69
GGA3-207ENST00000578896 TRIAP1O43715 76 aa4.46□□□□□ -1.7
GGA3-207ENST00000578896 MT1FP04733 61 aa4.46□□□□□ -1.7
GGA3-207ENST00000578896 HRES1P13985 223 aa4.46□□□□□ -1.7
GGA3-207ENST00000578896 FXYD2P54710 66 aa4.46□□□□□ -1.7
GGA3-207ENST00000578896 CEND1Q8N111 149 aa4.46□□□□□ -1.7
GGA3-207ENST00000578896 HIGD1BQ9P298 99 aa4.46□□□□□ -1.7
GGA3-207ENST00000578896 PRO1854Q9UHT4 67 aa4.46□□□□□ -1.7
GGA3-207ENST00000578896 LCE2BO14633 110 aa4.45□□□□□ -1.7
GGA3-207ENST00000578896 ANKRD29Q8N6D5 301 aa4.45□□□□□ -1.7
GGA3-207ENST00000578896 IGHV6-1A0A0B4J1U7 121 aa4.43□□□□□ -1.7
GGA3-207ENST00000578896 A0A1B0GX51 115 aa4.43□□□□□ -1.7
GGA3-207ENST00000578896 K7ERJ3 54 aa4.43□□□□□ -1.7
GGA3-207ENST00000578896 MPLKIPQ8TAP9 179 aa4.43□□□□□ -1.7
GGA3-207ENST00000578896 VAMP8Q9BV40 100 aa4.43□□□□□ -1.7
GGA3-207ENST00000578896 LINC00472Q9H8W2 130 aa4.43□□□□□ -1.7
GGA3-207ENST00000578896 SYNE2Q8WXH0 6885 aaKnown RBP4.42□□□□□ -1.7
GGA3-207ENST00000578896 KRTAP10-10P60014 251 aa4.42□□□□□ -1.7
GGA3-207ENST00000578896 KRTAP19-1Q8IUB9 90 aa4.42□□□□□ -1.7
GGA3-207ENST00000578896 KRTAP9-3Q9BYQ3 159 aa4.42□□□□□ -1.7
GGA3-207ENST00000578896 ORMDL1Q9P0S3 153 aa4.42□□□□□ -1.7
GGA3-207ENST00000578896 RBM12B-AS1Q9P1G2 102 aa4.42□□□□□ -1.7
GGA3-207ENST00000578896 TRBV7-4A0A0J9YYF1 115 aa4.41□□□□□ -1.7
GGA3-207ENST00000578896 DNAL4O96015 105 aa4.41□□□□□ -1.7
GGA3-207ENST00000578896 GHRHP01286 108 aa4.41□□□□□ -1.7
GGA3-207ENST00000578896 CCKP06307 115 aa4.41□□□□□ -1.7
GGA3-207ENST00000578896 S100A1P23297 94 aa4.41□□□□□ -1.7
GGA3-207ENST00000578896 PSMB2P49721 201 aa4.41□□□□□ -1.7
GGA3-207ENST00000578896 TMEM238LA0A1B0GVL6 79 aa4.4□□□□□ -1.71
GGA3-207ENST00000578896 A6NJY4 79 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms