RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 Q6ZVQ6 151 aa6.94□□□□□ -1.3
SKA2-204ENST00000578519 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.94□□□□□ -1.3
SKA2-204ENST00000578519 KRTAP5-3Q6L8H2 238 aa6.93□□□□□ -1.3
SKA2-204ENST00000578519 KRTAP4-5Q9BYR2 181 aa6.93□□□□□ -1.3
SKA2-204ENST00000578519 DYNC2H1Q8NCM8 4307 aaKnown RBP6.93□□□□□ -1.3
SKA2-204ENST00000578519 IGLV8-61A0A075B6I0 122 aa6.92□□□□□ -1.3
SKA2-204ENST00000578519 ATOX1O00244 68 aa6.92□□□□□ -1.3
SKA2-204ENST00000578519 HIST1H4AP62805 103 aaKnown RBP6.92□□□□□ -1.3
SKA2-204ENST00000578519 Q8NBF4 154 aa6.92□□□□□ -1.3
SKA2-204ENST00000578519 FAM236AA0A1B0GUQ0 79 aa6.91□□□□□ -1.3
SKA2-204ENST00000578519 FAM236BA0A1B0GV22 79 aa6.91□□□□□ -1.3
SKA2-204ENST00000578519 PANO1I0J062 215 aa6.9□□□□□ -1.3
SKA2-204ENST00000578519 SMIM29Q86T20 159 aa6.9□□□□□ -1.3
SKA2-204ENST00000578519 RPL37AP61513 92 aaKnown RBP6.89□□□□□ -1.31
SKA2-204ENST00000578519 C3orf22Q8N5N4 141 aa6.89□□□□□ -1.31
SKA2-204ENST00000578519 SPRR4Q96PI1 79 aa6.89□□□□□ -1.31
SKA2-204ENST00000578519 KRTAP13-1Q8IUC0 172 aa6.88□□□□□ -1.31
SKA2-204ENST00000578519 BPY2O14599 106 aa6.87□□□□□ -1.31
SKA2-204ENST00000578519 ZNF861PO60384 105 aa6.87□□□□□ -1.31
SKA2-204ENST00000578519 CRYGAP11844 174 aa6.87□□□□□ -1.31
SKA2-204ENST00000578519 LINC00336Q6ZUF6 198 aa6.87□□□□□ -1.31
SKA2-204ENST00000578519 KRTAP11-1Q8IUC1 163 aa6.87□□□□□ -1.31
SKA2-204ENST00000578519 SMIM20Q8N5G0 67 aa6.87□□□□□ -1.31
SKA2-204ENST00000578519 A0A1W2PNM2 257 aa6.86□□□□□ -1.31
SKA2-204ENST00000578519 PSORS1C2Q9UIG4 136 aa6.86□□□□□ -1.31
SKA2-204ENST00000578519 DNAH1Q9P2D7 4330 aa6.86□□□□□ -1.31
SKA2-204ENST00000578519 IGFL1Q6UW32 110 aa6.85□□□□□ -1.31
SKA2-204ENST00000578519 COL7A1Q02388 2944 aa6.84□□□□□ -1.31
SKA2-204ENST00000578519 FAM229AH3BQW9 127 aa6.83□□□□□ -1.32
SKA2-204ENST00000578519 IGLV7-43P04211 117 aa6.82□□□□□ -1.32
SKA2-204ENST00000578519 LINC00483Q53H64 154 aa6.82□□□□□ -1.32
SKA2-204ENST00000578519 LCE6AA0A183 80 aa6.81□□□□□ -1.32
SKA2-204ENST00000578519 UQCRQO14949 82 aa6.81□□□□□ -1.32
SKA2-204ENST00000578519 A0A087WVE0 104 aa6.8□□□□□ -1.32
SKA2-204ENST00000578519 KRTAP10-2P60368 255 aa6.8□□□□□ -1.32
SKA2-204ENST00000578519 C9orf153Q5TBE3 101 aa6.8□□□□□ -1.32
SKA2-204ENST00000578519 SERP2Q8N6R1 65 aa6.8□□□□□ -1.32
SKA2-204ENST00000578519 COX7CP15954 63 aa6.79□□□□□ -1.32
SKA2-204ENST00000578519 Q6ZSA8 131 aa6.79□□□□□ -1.32
SKA2-204ENST00000578519 CIRBP-AS1Q8TBR5 109 aa6.79□□□□□ -1.32
SKA2-204ENST00000578519 DNAH7Q8WXX0 4024 aa6.78□□□□□ -1.32
SKA2-204ENST00000578519 SS18L2Q9UHA2 77 aa6.78□□□□□ -1.32
SKA2-204ENST00000578519 A0A087WSZ3 146 aa6.77□□□□□ -1.33
SKA2-204ENST00000578519 J3KT08 172 aa6.77□□□□□ -1.33
SKA2-204ENST00000578519 SCXQ7RTU7 201 aa6.77□□□□□ -1.33
SKA2-204ENST00000578519 KRTAP9-8Q9BYQ0 159 aa6.77□□□□□ -1.33
SKA2-204ENST00000578519 PLECQ15149 4684 aaKnown RBP6.77□□□□□ -1.33
SKA2-204ENST00000578519 MEGF8Q7Z7M0 2845 aa6.76□□□□□ -1.33
SKA2-204ENST00000578519 IGLV9-49A0A0B4J1Y8 123 aa6.76□□□□□ -1.33
SKA2-204ENST00000578519 PRKDCP78527 4128 aaKnown RBP6.75□□□□□ -1.33
SKA2-204ENST00000578519 TRAV7A0A075B6U4 112 aa6.75□□□□□ -1.33
SKA2-204ENST00000578519 KRTAP10-1P60331 282 aa6.75□□□□□ -1.33
SKA2-204ENST00000578519 SSBP3-AS1Q7Z2R9 100 aa6.75□□□□□ -1.33
SKA2-204ENST00000578519 FAM30AQ9NZY2 134 aa6.75□□□□□ -1.33
SKA2-204ENST00000578519 VPS13DQ5THJ4 4388 aa6.75□□□□□ -1.33
SKA2-204ENST00000578519 STARD9Q9P2P6 4700 aa6.74□□□□□ -1.33
SKA2-204ENST00000578519 IGKV4-1P06312 121 aa6.74□□□□□ -1.33
SKA2-204ENST00000578519 CSMD3Q7Z407 3707 aa6.73□□□□□ -1.33
SKA2-204ENST00000578519 DNHD1Q96M86 4753 aa6.72□□□□□ -1.33
SKA2-204ENST00000578519 CCDC179H3BU77 68 aa6.72□□□□□ -1.33
SKA2-204ENST00000578519 NDUFB1O75438 58 aa6.72□□□□□ -1.33
SKA2-204ENST00000578519 CD164Q04900 197 aa6.71□□□□□ -1.34
SKA2-204ENST00000578519 MOBPQ13875 183 aa6.71□□□□□ -1.34
SKA2-204ENST00000578519 FAM229BQ4G0N7 80 aa6.7□□□□□ -1.34
SKA2-204ENST00000578519 CDK2AP2O75956 126 aa6.69□□□□□ -1.34
SKA2-204ENST00000578519 FBN3Q75N90 2809 aa6.69□□□□□ -1.34
SKA2-204ENST00000578519 A0A0G2JQZ4 141 aa6.68□□□□□ -1.34
SKA2-204ENST00000578519 DSCR10P59022 87 aa6.68□□□□□ -1.34
SKA2-204ENST00000578519 ALMS1Q8TCU4 4167 aa6.68□□□□□ -1.34
SKA2-204ENST00000578519 DNAH6Q9C0G6 4158 aa6.68□□□□□ -1.34
SKA2-204ENST00000578519 HCG22E2RYF7 251 aa6.67□□□□□ -1.34
SKA2-204ENST00000578519 Q8N9L7 120 aa6.67□□□□□ -1.34
SKA2-204ENST00000578519 LINC00472Q9H8W2 130 aa6.67□□□□□ -1.34
SKA2-204ENST00000578519 TENM2Q9NT68 2774 aa6.67□□□□□ -1.34
SKA2-204ENST00000578519 A8MWP4 228 aa6.66□□□□□ -1.34
SKA2-204ENST00000578519 K7EQZ3 153 aa6.65□□□□□ -1.34
SKA2-204ENST00000578519 PRR15Q8IV56 129 aa6.65□□□□□ -1.34
SKA2-204ENST00000578519 LYSTQ99698 3801 aa6.65□□□□□ -1.35
SKA2-204ENST00000578519 SPINK6Q6UWN8 80 aa6.64□□□□□ -1.35
SKA2-204ENST00000578519 DNAH10Q8IVF4 4471 aa6.64□□□□□ -1.35
SKA2-204ENST00000578519 NDUFC1O43677 76 aa6.63□□□□□ -1.35
SKA2-204ENST00000578519 HRCT1Q6UXD1 115 aa6.63□□□□□ -1.35
SKA2-204ENST00000578519 DEFB116Q30KQ4 102 aa6.62□□□□□ -1.35
SKA2-204ENST00000578519 ANAPC11Q9NYG5 84 aa6.62□□□□□ -1.35
SKA2-204ENST00000578519 C20orf197Q8N268 126 aa6.61□□□□□ -1.35
SKA2-204ENST00000578519 A0A1B0GVY2 172 aa6.6□□□□□ -1.35
SKA2-204ENST00000578519 ASB16-AS1Q495Z4 193 aa6.6□□□□□ -1.35
SKA2-204ENST00000578519 CASC2Q6XLA1 102 aa6.6□□□□□ -1.35
SKA2-204ENST00000578519 LIMD2Q9BT23 127 aa6.6□□□□□ -1.35
SKA2-204ENST00000578519 TMEM258P61165 79 aa6.59□□□□□ -1.35
SKA2-204ENST00000578519 C5orf47Q569G3 176 aa6.59□□□□□ -1.35
SKA2-204ENST00000578519 OCR1Q9BZK8 76 aa6.59□□□□□ -1.35
SKA2-204ENST00000578519 KLKP1Q107X0 134 aa6.58□□□□□ -1.36
SKA2-204ENST00000578519 PLA2G1BP04054 148 aaKnown RBP6.57□□□□□ -1.36
SKA2-204ENST00000578519 Q5XG85 94 aa6.57□□□□□ -1.36
SKA2-204ENST00000578519 WFDC13Q8IUB5 93 aa6.57□□□□□ -1.36
SKA2-204ENST00000578519 KMT2AQ03164 3969 aa6.57□□□□□ -1.36
SKA2-204ENST00000578519 TMEM254Q8TBM7 123 aa6.56□□□□□ -1.36
SKA2-204ENST00000578519 DNAH17Q9UFH2 4485 aa6.55□□□□□ -1.36
SKA2-204ENST00000578519 A0A1B0GVX0 72 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms