RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 SMIM29Q86T20 159 aa11.26□□□□□ -0.61
PRKCA-203ENST00000578063 LOC110117498A0A087WWA1 95 aa11.26□□□□□ -0.61
PRKCA-203ENST00000578063 F8WEM9 126 aa11.25□□□□□ -0.61
PRKCA-203ENST00000578063 PDE6GP18545 87 aa11.25□□□□□ -0.61
PRKCA-203ENST00000578063 APOBP04114 4563 aaKnown RBP11.25□□□□□ -0.61
PRKCA-203ENST00000578063 TRBV7-4A0A0J9YYF1 115 aa11.23□□□□□ -0.61
PRKCA-203ENST00000578063 LINC00483Q53H64 154 aa11.23□□□□□ -0.61
PRKCA-203ENST00000578063 FAM240AA0A1B0GVK7 77 aa11.23□□□□□ -0.61
PRKCA-203ENST00000578063 RPL37AP61513 92 aaKnown RBP11.23□□□□□ -0.61
PRKCA-203ENST00000578063 C21orf62-AS1Q17RA5 79 aa11.23□□□□□ -0.61
PRKCA-203ENST00000578063 Q6ZQT0 140 aa11.22□□□□□ -0.61
PRKCA-203ENST00000578063 CCKP06307 115 aa11.21□□□□□ -0.61
PRKCA-203ENST00000578063 SMR3BP02814 79 aaPredicted RBP11.21□□□□□ -0.62
PRKCA-203ENST00000578063 ACYP1P07311 99 aa11.2□□□□□ -0.62
PRKCA-203ENST00000578063 IGLV8-61A0A075B6I0 122 aa11.18□□□□□ -0.62
PRKCA-203ENST00000578063 SRRM2Q9UQ35 2752 aaKnown RBP11.17□□□□□ -0.62
PRKCA-203ENST00000578063 CDK2AP2O75956 126 aa11.17□□□□□ -0.62
PRKCA-203ENST00000578063 VPS13BQ7Z7G8 4022 aa11.15□□□□□ -0.62
PRKCA-203ENST00000578063 Q6JHZ5 121 aa11.13□□□□□ -0.63
PRKCA-203ENST00000578063 VPS25Q9BRG1 176 aa11.12□□□□□ -0.63
PRKCA-203ENST00000578063 SPINK6Q6UWN8 80 aa11.11□□□□□ -0.63
PRKCA-203ENST00000578063 IGFL1Q6UW32 110 aa11.1□□□□□ -0.63
PRKCA-203ENST00000578063 IGLV9-49A0A0B4J1Y8 123 aa11.09□□□□□ -0.63
PRKCA-203ENST00000578063 ANAPC11Q9NYG5 84 aa11.09□□□□□ -0.63
PRKCA-203ENST00000578063 C9orf153Q5TBE3 101 aa11.09□□□□□ -0.63
PRKCA-203ENST00000578063 Q8NBF4 154 aa11.09□□□□□ -0.63
PRKCA-203ENST00000578063 CDIP1Q9H305 208 aa11.09□□□□□ -0.63
PRKCA-203ENST00000578063 LOC100996750A0A140TA64 210 aa11.08□□□□□ -0.64
PRKCA-203ENST00000578063 KRTAP10-4P60372 401 aaPredicted RBP11.08□□□□□ -0.64
PRKCA-203ENST00000578063 KRTAP4-6Q9BYQ5 205 aa11.08□□□□□ -0.64
PRKCA-203ENST00000578063 A0A1B0GW54 56 aa11.07□□□□□ -0.64
PRKCA-203ENST00000578063 A0A1W2PNM2 257 aa11.06□□□□□ -0.64
PRKCA-203ENST00000578063 FAM229AH3BQW9 127 aa11.06□□□□□ -0.64
PRKCA-203ENST00000578063 FAM229BQ4G0N7 80 aa11.06□□□□□ -0.64
PRKCA-203ENST00000578063 LINC00846Q9NV44 126 aa11.06□□□□□ -0.64
PRKCA-203ENST00000578063 PLA2G1BP04054 148 aaKnown RBP11.06□□□□□ -0.64
PRKCA-203ENST00000578063 MOBPQ13875 183 aa11.05□□□□□ -0.64
PRKCA-203ENST00000578063 FAT1Q14517 4588 aa11.04□□□□□ -0.64
PRKCA-203ENST00000578063 KRTAP1-4P0C5Y4 121 aa11.04□□□□□ -0.64
PRKCA-203ENST00000578063 EPPK1P58107 5090 aaKnown RBP11.02□□□□□ -0.64
PRKCA-203ENST00000578063 A0A0G2JQZ4 141 aa11.02□□□□□ -0.65
PRKCA-203ENST00000578063 CRYGAP11844 174 aa11.02□□□□□ -0.65
PRKCA-203ENST00000578063 Q6Q795 121 aa11.01□□□□□ -0.65
PRKCA-203ENST00000578063 UBL5Q9BZL1 73 aa11.01□□□□□ -0.65
PRKCA-203ENST00000578063 HSPG2P98160 4391 aa11□□□□□ -0.65
PRKCA-203ENST00000578063 RYR1P21817 5038 aa10.99□□□□□ -0.65
PRKCA-203ENST00000578063 Q5VSD8 79 aa10.98□□□□□ -0.65
PRKCA-203ENST00000578063 SSBP3-AS1Q7Z2R9 100 aa10.98□□□□□ -0.65
PRKCA-203ENST00000578063 LINC00643Q86TS7 51 aa10.98□□□□□ -0.65
PRKCA-203ENST00000578063 A0A087X002 238 aa10.98□□□□□ -0.65
PRKCA-203ENST00000578063 Q6ZVQ6 151 aa10.95□□□□□ -0.66
PRKCA-203ENST00000578063 KRTAP13-2Q52LG2 175 aa10.95□□□□□ -0.66
PRKCA-203ENST00000578063 TRBV7-7A0A0K0K1E9 115 aa10.93□□□□□ -0.66
PRKCA-203ENST00000578063 A0A087WSZ3 146 aa10.92□□□□□ -0.66
PRKCA-203ENST00000578063 SIGMAR1Q99720 223 aa10.92□□□□□ -0.66
PRKCA-203ENST00000578063 NREPQ16612 68 aa10.92□□□□□ -0.66
PRKCA-203ENST00000578063 ATP5EP2Q5VTU8 51 aa10.91□□□□□ -0.66
PRKCA-203ENST00000578063 MT-ATP8P03928 68 aa10.9□□□□□ -0.66
PRKCA-203ENST00000578063 CD164Q04900 197 aa10.9□□□□□ -0.66
PRKCA-203ENST00000578063 KIAA1109Q2LD37 5005 aa10.9□□□□□ -0.66
PRKCA-203ENST00000578063 Q8N1X5 172 aa10.89□□□□□ -0.67
PRKCA-203ENST00000578063 HRCT1Q6UXD1 115 aa10.87□□□□□ -0.67
PRKCA-203ENST00000578063 TYMSOSQ8TAI1 123 aa10.87□□□□□ -0.67
PRKCA-203ENST00000578063 PKHD1L1Q86WI1 4243 aa10.87□□□□□ -0.67
PRKCA-203ENST00000578063 SS18L2Q9UHA2 77 aa10.86□□□□□ -0.67
PRKCA-203ENST00000578063 PRR26Q8N8Z3 221 aa10.85□□□□□ -0.67
PRKCA-203ENST00000578063 IGKV3D-7A0A0C4DH55 119 aa10.84□□□□□ -0.67
PRKCA-203ENST00000578063 CXCL6P80162 114 aa10.84□□□□□ -0.67
PRKCA-203ENST00000578063 KRTAP17-1Q9BYP8 105 aa10.82□□□□□ -0.68
PRKCA-203ENST00000578063 BPY2O14599 106 aa10.81□□□□□ -0.68
PRKCA-203ENST00000578063 IMUPQ9GZP8 106 aa10.81□□□□□ -0.68
PRKCA-203ENST00000578063 C4orf48Q5BLP8 95 aa10.78□□□□□ -0.68
PRKCA-203ENST00000578063 LINC00472Q9H8W2 130 aa10.76□□□□□ -0.69
PRKCA-203ENST00000578063 LINC00304Q8N9R0 145 aa10.75□□□□□ -0.69
PRKCA-203ENST00000578063 Q5XG85 94 aa10.75□□□□□ -0.69
PRKCA-203ENST00000578063 SPAG11AQ6PDA7 123 aa10.75□□□□□ -0.69
PRKCA-203ENST00000578063 SPINK1P00995 79 aa10.74□□□□□ -0.69
PRKCA-203ENST00000578063 LIMD2Q9BT23 127 aa10.74□□□□□ -0.69
PRKCA-203ENST00000578063 HIST1H4AP62805 103 aaKnown RBP10.72□□□□□ -0.69
PRKCA-203ENST00000578063 ASB16-AS1Q495Z4 193 aa10.72□□□□□ -0.69
PRKCA-203ENST00000578063 J3KT08 172 aa10.72□□□□□ -0.69
PRKCA-203ENST00000578063 Q96NJ1 140 aa10.72□□□□□ -0.69
PRKCA-203ENST00000578063 RPS29P62273 56 aaKnown RBP10.71□□□□□ -0.69
PRKCA-203ENST00000578063 DEFB116Q30KQ4 102 aa10.71□□□□□ -0.69
PRKCA-203ENST00000578063 DSCR10P59022 87 aa10.7□□□□□ -0.7
PRKCA-203ENST00000578063 BIRC6Q9NR09 4857 aa10.69□□□□□ -0.7
PRKCA-203ENST00000578063 SCGB1A1P11684 91 aa10.67□□□□□ -0.7
PRKCA-203ENST00000578063 Q8N9L7 120 aa10.67□□□□□ -0.7
PRKCA-203ENST00000578063 IGKV4-1P06312 121 aa10.66□□□□□ -0.7
PRKCA-203ENST00000578063 A0A087WVE0 104 aa10.65□□□□□ -0.7
PRKCA-203ENST00000578063 A8MWP4 228 aa10.65□□□□□ -0.7
PRKCA-203ENST00000578063 K7EQZ3 153 aa10.64□□□□□ -0.71
PRKCA-203ENST00000578063 KRTAP10-8P60410 259 aa10.64□□□□□ -0.71
PRKCA-203ENST00000578063 NDUFB1O75438 58 aa10.61□□□□□ -0.71
PRKCA-203ENST00000578063 KRTAP4-5Q9BYR2 181 aa10.61□□□□□ -0.71
PRKCA-203ENST00000578063 FAM236AA0A1B0GUQ0 79 aa10.61□□□□□ -0.71
PRKCA-203ENST00000578063 FAM236BA0A1B0GV22 79 aa10.61□□□□□ -0.71
PRKCA-203ENST00000578063 C1orf195Q5TG92 126 aa10.6□□□□□ -0.71
PRKCA-203ENST00000578063 PRR15Q8IV56 129 aa10.6□□□□□ -0.71
PRKCA-203ENST00000578063 FAT3Q8TDW7 4589 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms