RNA–Protein interactions for RNA: ENST00000574662.1

SMPD3-212, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-212ENST00000574662 FAM19A5Q7Z5A7 132 aaPredicted RBP10.06□□□□□ -0.8
SMPD3-212ENST00000574662 PKHD1P08F94 4074 aa10.06□□□□□ -0.8
SMPD3-212ENST00000574662 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.06□□□□□ -0.8
SMPD3-212ENST00000574662 FAM236DA0A1B0GTK5 79 aa10.05□□□□□ -0.8
SMPD3-212ENST00000574662 FAM236CP0DP71 79 aa10.05□□□□□ -0.8
SMPD3-212ENST00000574662 Q6ZRX8 168 aa10.05□□□□□ -0.8
SMPD3-212ENST00000574662 SCXQ7RTU7 201 aa10.05□□□□□ -0.8
SMPD3-212ENST00000574662 IGLV5-48A0A075B6I7 105 aa10.04□□□□□ -0.8
SMPD3-212ENST00000574662 FAM168BA1KXE4 195 aa10.04□□□□□ -0.8
SMPD3-212ENST00000574662 NREPQ16612 68 aa10.04□□□□□ -0.8
SMPD3-212ENST00000574662 FAM30AQ9NZY2 134 aa10.04□□□□□ -0.8
SMPD3-212ENST00000574662 DNAH8Q96JB1 4490 aa10.04□□□□□ -0.8
SMPD3-212ENST00000574662 KRTAP7-1Q8IUC3 87 aa10.03□□□□□ -0.8
SMPD3-212ENST00000574662 A0A1W2PNN7 141 aa10.03□□□□□ -0.8
SMPD3-212ENST00000574662 SPRR1AP35321 89 aa10.03□□□□□ -0.8
SMPD3-212ENST00000574662 Q8N377 158 aa10.03□□□□□ -0.8
SMPD3-212ENST00000574662 DYNC1H1Q14204 4646 aaKnown RBP10.03□□□□□ -0.8
SMPD3-212ENST00000574662 IGLV1-50A0A075B6I6 118 aa10.02□□□□□ -0.81
SMPD3-212ENST00000574662 ETDCA0A1B0GVM5 59 aa10.02□□□□□ -0.81
SMPD3-212ENST00000574662 NDUFC1O43677 76 aa10.02□□□□□ -0.81
SMPD3-212ENST00000574662 PKIGQ9Y2B9 76 aa10.02□□□□□ -0.81
SMPD3-212ENST00000574662 H7BZZ5 65 aa10.01□□□□□ -0.81
SMPD3-212ENST00000574662 SPACA4Q8TDM5 124 aa10.01□□□□□ -0.81
SMPD3-212ENST00000574662 LRP1BQ9NZR2 4599 aa10.01□□□□□ -0.81
SMPD3-212ENST00000574662 KRTAP4-16G5E9R7 235 aaPredicted RBP10.01□□□□□ -0.81
SMPD3-212ENST00000574662 ERC2-IT1O76042 136 aa10.01□□□□□ -0.81
SMPD3-212ENST00000574662 IGKV4-1P06312 121 aa10□□□□□ -0.81
SMPD3-212ENST00000574662 DEFB105AQ8NG35 78 aa10□□□□□ -0.81
SMPD3-212ENST00000574662 BPY2O14599 106 aa9.99□□□□□ -0.81
SMPD3-212ENST00000574662 LINC00474Q9P2X8 69 aa9.99□□□□□ -0.81
SMPD3-212ENST00000574662 Q6ZSA8 131 aa9.98□□□□□ -0.81
SMPD3-212ENST00000574662 Q9BRP9 147 aa9.97□□□□□ -0.81
SMPD3-212ENST00000574662 SERP1Q9Y6X1 66 aa9.97□□□□□ -0.81
SMPD3-212ENST00000574662 RPL37AP8A6NKH3 93 aa9.96□□□□□ -0.81
SMPD3-212ENST00000574662 OXTP01178 125 aa9.96□□□□□ -0.81
SMPD3-212ENST00000574662 ATP5EP56381 51 aaPredicted RBP9.96□□□□□ -0.81
SMPD3-212ENST00000574662 MRPL55Q7Z7F7 128 aaKnown RBP9.96□□□□□ -0.82
SMPD3-212ENST00000574662 EPM2AB3EWF7 344 aa9.95□□□□□ -0.82
SMPD3-212ENST00000574662 PLAC8Q9NZF1 115 aa9.94□□□□□ -0.82
SMPD3-212ENST00000574662 SNURFQ9Y675 71 aa9.94□□□□□ -0.82
SMPD3-212ENST00000574662 C1orf137Q5JT78 98 aa9.93□□□□□ -0.82
SMPD3-212ENST00000574662 Q8NBF4 154 aa9.93□□□□□ -0.82
SMPD3-212ENST00000574662 F8WEM9 126 aa9.93□□□□□ -0.82
SMPD3-212ENST00000574662 CIRBP-AS1Q8TBR5 109 aa9.93□□□□□ -0.82
SMPD3-212ENST00000574662 C5orf47Q569G3 176 aa9.92□□□□□ -0.82
SMPD3-212ENST00000574662 PHF5AQ7RTV0 110 aaKnown RBP9.92□□□□□ -0.82
SMPD3-212ENST00000574662 A0A1W2PNM2 257 aa9.91□□□□□ -0.82
SMPD3-212ENST00000574662 Q8N9L7 120 aa9.91□□□□□ -0.82
SMPD3-212ENST00000574662 TMEM254Q8TBM7 123 aa9.91□□□□□ -0.82
SMPD3-212ENST00000574662 REG3GQ6UW15 175 aa9.91□□□□□ -0.82
SMPD3-212ENST00000574662 SPRR4Q96PI1 79 aa9.91□□□□□ -0.82
SMPD3-212ENST00000574662 OCR1Q9BZK8 76 aa9.91□□□□□ -0.82
SMPD3-212ENST00000574662 UBE2BP63146 152 aa9.9□□□□□ -0.82
SMPD3-212ENST00000574662 KRTAP11-1Q8IUC1 163 aa9.88□□□□□ -0.83
SMPD3-212ENST00000574662 ST20-AS1Q8NBB2 130 aa9.88□□□□□ -0.83
SMPD3-212ENST00000574662 APOBP04114 4563 aaKnown RBP9.88□□□□□ -0.83
SMPD3-212ENST00000574662 Q5XG85 94 aa9.86□□□□□ -0.83
SMPD3-212ENST00000574662 A0A0U1RQV1 116 aa9.85□□□□□ -0.83
SMPD3-212ENST00000574662 SMIM29Q86T20 159 aa9.81□□□□□ -0.84
SMPD3-212ENST00000574662 SMIM26A0A096LP01 95 aa9.8□□□□□ -0.84
SMPD3-212ENST00000574662 IGLV8-61A0A075B6I0 122 aa9.78□□□□□ -0.84
SMPD3-212ENST00000574662 SMR3BP02814 79 aaPredicted RBP9.78□□□□□ -0.84
SMPD3-212ENST00000574662 C4orf26Q17RF5 130 aa9.78□□□□□ -0.84
SMPD3-212ENST00000574662 HERC2O95714 4834 aa9.78□□□□□ -0.84
SMPD3-212ENST00000574662 DSCR10P59022 87 aa9.78□□□□□ -0.84
SMPD3-212ENST00000574662 KIAA1109Q2LD37 5005 aa9.77□□□□□ -0.84
SMPD3-212ENST00000574662 PSORS1C2Q9UIG4 136 aa9.77□□□□□ -0.85
SMPD3-212ENST00000574662 CDK2AP2O75956 126 aa9.75□□□□□ -0.85
SMPD3-212ENST00000574662 IGFL1Q6UW32 110 aa9.75□□□□□ -0.85
SMPD3-212ENST00000574662 HRCT1Q6UXD1 115 aa9.75□□□□□ -0.85
SMPD3-212ENST00000574662 RYR1P21817 5038 aa9.74□□□□□ -0.85
SMPD3-212ENST00000574662 K7EQZ3 153 aa9.74□□□□□ -0.85
SMPD3-212ENST00000574662 PRLHP81277 87 aa9.73□□□□□ -0.85
SMPD3-212ENST00000574662 HIGD2AQ9BW72 106 aa9.73□□□□□ -0.85
SMPD3-212ENST00000574662 HSPG2P98160 4391 aa9.73□□□□□ -0.85
SMPD3-212ENST00000574662 HCG22E2RYF7 251 aa9.73□□□□□ -0.85
SMPD3-212ENST00000574662 FAT1Q14517 4588 aa9.72□□□□□ -0.85
SMPD3-212ENST00000574662 H0Y9J4 135 aa9.72□□□□□ -0.85
SMPD3-212ENST00000574662 KRTAP17-1Q9BYP8 105 aa9.71□□□□□ -0.85
SMPD3-212ENST00000574662 UBE2AP49459 152 aa9.7□□□□□ -0.86
SMPD3-212ENST00000574662 VPS13BQ7Z7G8 4022 aa9.7□□□□□ -0.86
SMPD3-212ENST00000574662 SPRR1BP22528 89 aa9.7□□□□□ -0.86
SMPD3-212ENST00000574662 FP248Q71RG6 208 aaPredicted RBP9.68□□□□□ -0.86
SMPD3-212ENST00000574662 A0A087WSZ3 146 aa9.66□□□□□ -0.86
SMPD3-212ENST00000574662 KRTAP13-1Q8IUC0 172 aa9.66□□□□□ -0.86
SMPD3-212ENST00000574662 ZCCHC13Q8WW36 166 aaKnown RBP9.66□□□□□ -0.86
SMPD3-212ENST00000574662 IGLV7-43P04211 117 aa9.65□□□□□ -0.86
SMPD3-212ENST00000574662 KRTAP10-4P60372 401 aaPredicted RBP9.65□□□□□ -0.86
SMPD3-212ENST00000574662 RPL37AP61513 92 aaKnown RBP9.65□□□□□ -0.86
SMPD3-212ENST00000574662 SRRM2Q9UQ35 2752 aaKnown RBP9.64□□□□□ -0.87
SMPD3-212ENST00000574662 ZNF861PO60384 105 aa9.62□□□□□ -0.87
SMPD3-212ENST00000574662 A0A0G2JQZ4 141 aa9.61□□□□□ -0.87
SMPD3-212ENST00000574662 FAM229AH3BQW9 127 aa9.6□□□□□ -0.87
SMPD3-212ENST00000574662 NDUFB1O75438 58 aa9.6□□□□□ -0.87
SMPD3-212ENST00000574662 MP68P56378 58 aa9.58□□□□□ -0.88
SMPD3-212ENST00000574662 Q5VSD8 79 aa9.58□□□□□ -0.88
SMPD3-212ENST00000574662 WFDC13Q8IUB5 93 aa9.58□□□□□ -0.88
SMPD3-212ENST00000574662 Q8N1X5 172 aa9.58□□□□□ -0.88
SMPD3-212ENST00000574662 hDV103S1A0JD37 113 aa9.56□□□□□ -0.88
SMPD3-212ENST00000574662 KRTAP29-1A8MX34 341 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms