RNA–Protein interactions for RNA: ENST00000574194.1

ERCC4-205, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-205ENST00000574194 DEFB121Q5J5C9 76 aa-0.11□□□□□ -2.43
ERCC4-205ENST00000574194 TRANK1O15050 2925 aa-0.11□□□□□ -2.43
ERCC4-205ENST00000574194 FAT3Q8TDW7 4589 aa-0.11□□□□□ -2.43
ERCC4-205ENST00000574194 AKAP13Q12802 2813 aa-0.12□□□□□ -2.43
ERCC4-205ENST00000574194 CICQ96RK0 1608 aaPredicted RBP-0.12□□□□□ -2.43
ERCC4-205ENST00000574194 HERC2O95714 4834 aa-0.12□□□□□ -2.43
ERCC4-205ENST00000574194 PRO3102Q9H379 93 aa-0.12□□□□□ -2.43
ERCC4-205ENST00000574194 KNL1Q8NG31 2342 aa-0.12□□□□□ -2.43
ERCC4-205ENST00000574194 CCDC168Q8NDH2 2452 aa-0.12□□□□□ -2.43
ERCC4-205ENST00000574194 FLNBO75369 2602 aaKnown RBP-0.13□□□□□ -2.43
ERCC4-205ENST00000574194 LAMA3Q16787 3333 aa-0.13□□□□□ -2.43
ERCC4-205ENST00000574194 CNOT1A5YKK6 2376 aaKnown RBP-0.13□□□□□ -2.43
ERCC4-205ENST00000574194 NDUFA4O00483 81 aa-0.13□□□□□ -2.43
ERCC4-205ENST00000574194 EPG5Q9HCE0 2579 aa-0.13□□□□□ -2.43
ERCC4-205ENST00000574194 ABCC1P33527 1531 aa-0.13□□□□□ -2.43
ERCC4-205ENST00000574194 TGP01266 2768 aa-0.14□□□□□ -2.43
ERCC4-205ENST00000574194 H0YGG7 62 aa-0.14□□□□□ -2.43
ERCC4-205ENST00000574194 LINC00158P58513 81 aa-0.14□□□□□ -2.43
ERCC4-205ENST00000574194 DEFA5Q01523 94 aa-0.14□□□□□ -2.43
ERCC4-205ENST00000574194 DSPP15924 2871 aaKnown RBP-0.14□□□□□ -2.43
ERCC4-205ENST00000574194 FAT1Q14517 4588 aa-0.14□□□□□ -2.43
ERCC4-205ENST00000574194 USP9YO00507 2555 aaPredicted RBP-0.14□□□□□ -2.43
ERCC4-205ENST00000574194 PLCH1Q4KWH8 1693 aa-0.14□□□□□ -2.43
ERCC4-205ENST00000574194 CFAP43Q8NDM7 1665 aa-0.14□□□□□ -2.43
ERCC4-205ENST00000574194 ADAMTS12P58397 1594 aa-0.15□□□□□ -2.43
ERCC4-205ENST00000574194 C3orf79P0CE67 100 aa-0.15□□□□□ -2.43
ERCC4-205ENST00000574194 CFAP74Q9C0B2 1584 aa-0.15□□□□□ -2.43
ERCC4-205ENST00000574194 CCDC88BA6NC98 1476 aa-0.16□□□□□ -2.43
ERCC4-205ENST00000574194 PTPN23Q9H3S7 1636 aa-0.16□□□□□ -2.43
ERCC4-205ENST00000574194 NBEAL1Q6ZS30 2694 aa-0.16□□□□□ -2.43
ERCC4-205ENST00000574194 LAMA2P24043 3122 aaKnown RBP-0.16□□□□□ -2.43
ERCC4-205ENST00000574194 LCE6AA0A183 80 aa-0.16□□□□□ -2.44
ERCC4-205ENST00000574194 MT4P47944 62 aa-0.16□□□□□ -2.44
ERCC4-205ENST00000574194 C18orf32Q8TCD1 76 aa-0.16□□□□□ -2.44
ERCC4-205ENST00000574194 RRBP1Q9P2E9 1410 aaKnown RBP-0.16□□□□□ -2.44
ERCC4-205ENST00000574194 RICTORQ6R327 1708 aa-0.16□□□□□ -2.44
ERCC4-205ENST00000574194 DNHD1Q96M86 4753 aa-0.16□□□□□ -2.44
ERCC4-205ENST00000574194 PRRC2CQ9Y520 2896 aaKnown RBP-0.16□□□□□ -2.44
ERCC4-205ENST00000574194 SCN11AQ9UI33 1791 aa-0.17□□□□□ -2.44
ERCC4-205ENST00000574194 LRRK2Q5S007 2527 aa-0.17□□□□□ -2.44
ERCC4-205ENST00000574194 MAP1AP78559 2803 aaPredicted RBP-0.17□□□□□ -2.44
ERCC4-205ENST00000574194 KRTAP19-6Q3LI70 58 aa-0.17□□□□□ -2.44
ERCC4-205ENST00000574194 PCNX1Q96RV3 2341 aa-0.17□□□□□ -2.44
ERCC4-205ENST00000574194 BIRC6Q9NR09 4857 aa-0.18□□□□□ -2.44
ERCC4-205ENST00000574194 NIPBLQ6KC79 2804 aaeCLIP-0.18□□□□□ -2.44
ERCC4-205ENST00000574194 CELSR3Q9NYQ7 3312 aa-0.18□□□□□ -2.44
ERCC4-205ENST00000574194 DDX60LQ5H9U9 1706 aaKnown RBP-0.18□□□□□ -2.44
ERCC4-205ENST00000574194 LRP1BQ9NZR2 4599 aa-0.18□□□□□ -2.44
ERCC4-205ENST00000574194 KRTAP19-7Q3SYF9 63 aa-0.18□□□□□ -2.44
ERCC4-205ENST00000574194 LAMA5O15230 3695 aa-0.18□□□□□ -2.44
ERCC4-205ENST00000574194 WDFY4Q6ZS81 3184 aa-0.18□□□□□ -2.44
ERCC4-205ENST00000574194 MXRA5Q9NR99 2828 aa-0.19□□□□□ -2.44
ERCC4-205ENST00000574194 KRTAP20-2Q3LI61 65 aa-0.19□□□□□ -2.44
ERCC4-205ENST00000574194 LAMA1P25391 3075 aa-0.19□□□□□ -2.44
ERCC4-205ENST00000574194 MYO15AQ9UKN7 3530 aa-0.19□□□□□ -2.44
ERCC4-205ENST00000574194 TACC2O95359 2948 aa-0.19□□□□□ -2.44
ERCC4-205ENST00000574194 ITPR2Q14571 2701 aa-0.19□□□□□ -2.44
ERCC4-205ENST00000574194 MAP3K1Q13233 1512 aa-0.19□□□□□ -2.44
ERCC4-205ENST00000574194 NF1P21359 2839 aa-0.19□□□□□ -2.44
ERCC4-205ENST00000574194 PLXNC1O60486 1568 aa-0.19□□□□□ -2.44
ERCC4-205ENST00000574194 CEP295Q9C0D2 2601 aa-0.19□□□□□ -2.44
ERCC4-205ENST00000574194 STARD9Q9P2P6 4700 aa-0.19□□□□□ -2.44
ERCC4-205ENST00000574194 ITPR3Q14573 2671 aa-0.2□□□□□ -2.44
ERCC4-205ENST00000574194 GCN1Q92616 2671 aaKnown RBP-0.2□□□□□ -2.44
ERCC4-205ENST00000574194 H0YAA0 97 aa-0.2□□□□□ -2.44
ERCC4-205ENST00000574194 HMGA1P17096 107 aaKnown RBP-0.2□□□□□ -2.44
ERCC4-205ENST00000574194 TNRC18O15417 2968 aaPredicted RBP-0.2□□□□□ -2.44
ERCC4-205ENST00000574194 ANKARQ7Z5J8 1434 aa-0.21□□□□□ -2.44
ERCC4-205ENST00000574194 H3BVH4 76 aa-0.21□□□□□ -2.44
ERCC4-205ENST00000574194 CFAP46Q8IYW2 2715 aa-0.21□□□□□ -2.44
ERCC4-205ENST00000574194 UTP20O75691 2785 aaKnown RBP-0.21□□□□□ -2.44
ERCC4-205ENST00000574194 TEX15Q9BXT5 2789 aa-0.21□□□□□ -2.44
ERCC4-205ENST00000574194 TLN1Q9Y490 2541 aaKnown RBP-0.21□□□□□ -2.44
ERCC4-205ENST00000574194 PDE4DIPQ5VU43 2346 aa-0.21□□□□□ -2.44
ERCC4-205ENST00000574194 WDR87Q6ZQQ6 2873 aa-0.22□□□□□ -2.44
ERCC4-205ENST00000574194 DCHS1Q96JQ0 3298 aa-0.22□□□□□ -2.44
ERCC4-205ENST00000574194 KRTAP19-8Q3LI54 63 aa-0.22□□□□□ -2.44
ERCC4-205ENST00000574194 WIZO95785 1651 aa-0.22□□□□□ -2.44
ERCC4-205ENST00000574194 SVEP1Q4LDE5 3571 aa-0.22□□□□□ -2.44
ERCC4-205ENST00000574194 ABCA8O94911 1581 aa-0.23□□□□□ -2.45
ERCC4-205ENST00000574194 SCRIBQ14160 1630 aa-0.23□□□□□ -2.45
ERCC4-205ENST00000574194 SPRR2EP22531 72 aa-0.23□□□□□ -2.45
ERCC4-205ENST00000574194 SPRR2AP35326 72 aa-0.23□□□□□ -2.45
ERCC4-205ENST00000574194 KRTAP6-2Q3LI66 62 aa-0.23□□□□□ -2.45
ERCC4-205ENST00000574194 LYSTQ99698 3801 aa-0.23□□□□□ -2.45
ERCC4-205ENST00000574194 CD163L1Q9NR16 1453 aa-0.23□□□□□ -2.45
ERCC4-205ENST00000574194 DEPDC5O75140 1603 aa-0.24□□□□□ -2.45
ERCC4-205ENST00000574194 UNC80Q8N2C7 3258 aa-0.24□□□□□ -2.45
ERCC4-205ENST00000574194 NBPF19A0A087WUL8 3843 aa-0.24□□□□□ -2.45
ERCC4-205ENST00000574194 KALRNO60229 2985 aa-0.25□□□□□ -2.45
ERCC4-205ENST00000574194 A0A0C4DFX4 3053 aa-0.25□□□□□ -2.45
ERCC4-205ENST00000574194 DNAH7Q8WXX0 4024 aa-0.25□□□□□ -2.45
ERCC4-205ENST00000574194 ANKRD50Q9ULJ7 1429 aa-0.25□□□□□ -2.45
ERCC4-205ENST00000574194 LMTK2Q8IWU2 1503 aa-0.25□□□□□ -2.45
ERCC4-205ENST00000574194 MYO9AB2RTY4 2548 aa-0.25□□□□□ -2.45
ERCC4-205ENST00000574194 CHD7Q9P2D1 2997 aa-0.25□□□□□ -2.45
ERCC4-205ENST00000574194 EP400Q96L91 3159 aa-0.25□□□□□ -2.45
ERCC4-205ENST00000574194 NBEAQ8NFP9 2946 aa-0.26□□□□□ -2.45
ERCC4-205ENST00000574194 HFM1A2PYH4 1435 aa-0.26□□□□□ -2.45
ERCC4-205ENST00000574194 FLGP20930 4061 aaPredicted RBP-0.26□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms