RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 C12orf57Q99622 126 aa9.47□□□□□ -0.89
SMG6-212ENST00000573153 KRTAP9-2Q9BYQ4 174 aa9.47□□□□□ -0.89
SMG6-212ENST00000573153 PAM16Q9Y3D7 125 aa9.47□□□□□ -0.89
SMG6-212ENST00000573153 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.46□□□□□ -0.9
SMG6-212ENST00000573153 PPDPFLQ8WWR9 84 aa9.46□□□□□ -0.9
SMG6-212ENST00000573153 VAMP8Q9BV40 100 aa9.46□□□□□ -0.9
SMG6-212ENST00000573153 CFC1BP0CG36 223 aa9.45□□□□□ -0.9
SMG6-212ENST00000573153 CFC1P0CG37 223 aa9.45□□□□□ -0.9
SMG6-212ENST00000573153 C2orf91Q6ZV80 131 aa9.45□□□□□ -0.9
SMG6-212ENST00000573153 A0A0B4J2C4 111 aa9.44□□□□□ -0.9
SMG6-212ENST00000573153 F8WEM9 126 aa9.44□□□□□ -0.9
SMG6-212ENST00000573153 KRTAP19-2Q3LHN2 52 aa9.44□□□□□ -0.9
SMG6-212ENST00000573153 C1orf195Q5TG92 126 aa9.44□□□□□ -0.9
SMG6-212ENST00000573153 Q6JHZ5 121 aa9.43□□□□□ -0.9
SMG6-212ENST00000573153 LCE2CQ5TA81 110 aa9.42□□□□□ -0.9
SMG6-212ENST00000573153 RAB37Q96AX2 223 aa9.4□□□□□ -0.9
SMG6-212ENST00000573153 TCL1BO95988 128 aa9.39□□□□□ -0.91
SMG6-212ENST00000573153 OCIAD2Q56VL3 154 aa9.39□□□□□ -0.91
SMG6-212ENST00000573153 CLEC2BQ92478 149 aa9.39□□□□□ -0.91
SMG6-212ENST00000573153 H0YGX0 51 aa9.38□□□□□ -0.91
SMG6-212ENST00000573153 CEND1Q8N111 149 aa9.38□□□□□ -0.91
SMG6-212ENST00000573153 IGFL1Q6UW32 110 aa9.37□□□□□ -0.91
SMG6-212ENST00000573153 C9orf92A6NGG3 77 aa9.36□□□□□ -0.91
SMG6-212ENST00000573153 TRBV7-7A0A0K0K1E9 115 aa9.35□□□□□ -0.91
SMG6-212ENST00000573153 TMEM238LA0A1B0GVL6 79 aa9.35□□□□□ -0.91
SMG6-212ENST00000573153 A6NJY4 79 aa9.35□□□□□ -0.91
SMG6-212ENST00000573153 PYY3Q5JQD4 70 aa9.34□□□□□ -0.91
SMG6-212ENST00000573153 SNHG12Q9BXW3 62 aa9.34□□□□□ -0.91
SMG6-212ENST00000573153 A0A1B0GX51 115 aa9.33□□□□□ -0.92
SMG6-212ENST00000573153 SNCGO76070 127 aa9.33□□□□□ -0.92
SMG6-212ENST00000573153 PCOTHQ58A44 107 aa9.33□□□□□ -0.92
SMG6-212ENST00000573153 PRO1854Q9UHT4 67 aa9.33□□□□□ -0.92
SMG6-212ENST00000573153 FXYD2P54710 66 aa9.32□□□□□ -0.92
SMG6-212ENST00000573153 FAM218AQ96MZ4 157 aa9.32□□□□□ -0.92
SMG6-212ENST00000573153 Q6Q795 121 aa9.29□□□□□ -0.92
SMG6-212ENST00000573153 H3BUT2 72 aa9.27□□□□□ -0.93
SMG6-212ENST00000573153 HSD52Q0P140 79 aa9.27□□□□□ -0.93
SMG6-212ENST00000573153 GHRHP01286 108 aa9.26□□□□□ -0.93
SMG6-212ENST00000573153 TRIAP1O43715 76 aa9.25□□□□□ -0.93
SMG6-212ENST00000573153 NDUFV3P56181 108 aaKnown RBP9.25□□□□□ -0.93
SMG6-212ENST00000573153 RPL37P61927 97 aaKnown RBP9.25□□□□□ -0.93
SMG6-212ENST00000573153 MT1HP80294 61 aa9.24□□□□□ -0.93
SMG6-212ENST00000573153 TEN1Q86WV5 123 aa9.22□□□□□ -0.93
SMG6-212ENST00000573153 FLGP20930 4061 aaPredicted RBP9.21□□□□□ -0.93
SMG6-212ENST00000573153 UQCR10Q9UDW1 63 aa9.21□□□□□ -0.94
SMG6-212ENST00000573153 SS18L2Q9UHA2 77 aa9.21□□□□□ -0.94
SMG6-212ENST00000573153 LST1O00453 97 aa9.2□□□□□ -0.94
SMG6-212ENST00000573153 TMA7Q9Y2S6 64 aaKnown RBP9.19□□□□□ -0.94
SMG6-212ENST00000573153 H3BMG7 143 aa9.18□□□□□ -0.94
SMG6-212ENST00000573153 H3BQ85 93 aa9.18□□□□□ -0.94
SMG6-212ENST00000573153 K7ERJ3 54 aa9.17□□□□□ -0.94
SMG6-212ENST00000573153 LCE2DQ5TA82 110 aaPredicted RBP9.17□□□□□ -0.94
SMG6-212ENST00000573153 FABP2P12104 132 aa9.16□□□□□ -0.94
SMG6-212ENST00000573153 KRTAP9-6A0A140TA67 174 aa9.14□□□□□ -0.95
SMG6-212ENST00000573153 DNAL4O96015 105 aa9.14□□□□□ -0.95
SMG6-212ENST00000573153 COX6CP09669 75 aa9.14□□□□□ -0.95
SMG6-212ENST00000573153 ORMDL1Q9P0S3 153 aa9.14□□□□□ -0.95
SMG6-212ENST00000573153 PSMB2P49721 201 aa9.13□□□□□ -0.95
SMG6-212ENST00000573153 Q75L30 129 aa9.13□□□□□ -0.95
SMG6-212ENST00000573153 A0A087WSZ3 146 aa9.12□□□□□ -0.95
SMG6-212ENST00000573153 A0A1W2PNM2 257 aa9.12□□□□□ -0.95
SMG6-212ENST00000573153 OBSCN-AS1Q96MR7 158 aa9.12□□□□□ -0.95
SMG6-212ENST00000573153 Q96NJ1 140 aa9.12□□□□□ -0.95
SMG6-212ENST00000573153 TMEM256-PLSCR3K7ERE1 68 aa9.11□□□□□ -0.95
SMG6-212ENST00000573153 TRBV7-4A0A0J9YYF1 115 aa9.09□□□□□ -0.95
SMG6-212ENST00000573153 LORP23490 312 aaPredicted RBP9.09□□□□□ -0.95
SMG6-212ENST00000573153 TRACP01848 142 aa9.08□□□□□ -0.96
SMG6-212ENST00000573153 UBE2V1Q13404 147 aa9.07□□□□□ -0.96
SMG6-212ENST00000573153 ANKRD29Q8N6D5 301 aa9.07□□□□□ -0.96
SMG6-212ENST00000573153 C20orf166-AS1Q96NR2 134 aa9.05□□□□□ -0.96
SMG6-212ENST00000573153 KRTAP10-6P60371 365 aaPredicted RBP9.04□□□□□ -0.96
SMG6-212ENST00000573153 ATP11AUNQ6ZP68 121 aa9.04□□□□□ -0.96
SMG6-212ENST00000573153 A8MUU9 505 aa9.03□□□□□ -0.96
SMG6-212ENST00000573153 SCGB1C2P0DMR2 95 aa9□□□□□ -0.97
SMG6-212ENST00000573153 FSIP2Q5CZC0 6907 aa9□□□□□ -0.97
SMG6-212ENST00000573153 CCKP06307 115 aa8.99□□□□□ -0.97
SMG6-212ENST00000573153 LINC00472Q9H8W2 130 aa8.98□□□□□ -0.97
SMG6-212ENST00000573153 A0A1B0GV72 72 aa8.97□□□□□ -0.97
SMG6-212ENST00000573153 M0R143 59 aa8.97□□□□□ -0.97
SMG6-212ENST00000573153 SMIM6P0DI80 62 aa8.97□□□□□ -0.97
SMG6-212ENST00000573153 SIGMAR1Q99720 223 aa8.96□□□□□ -0.98
SMG6-212ENST00000573153 IGKV4-1P06312 121 aa8.95□□□□□ -0.98
SMG6-212ENST00000573153 DSCR10P59022 87 aa8.95□□□□□ -0.98
SMG6-212ENST00000573153 RBM3P98179 157 aaKnown RBP8.95□□□□□ -0.98
SMG6-212ENST00000573153 COX6B2Q6YFQ2 88 aa8.93□□□□□ -0.98
SMG6-212ENST00000573153 KRTAP16-1A8MUX0 517 aa8.92□□□□□ -0.98
SMG6-212ENST00000573153 BAALC-AS2P0C853 105 aa8.92□□□□□ -0.98
SMG6-212ENST00000573153 LINC00313P59037 77 aa8.92□□□□□ -0.98
SMG6-212ENST00000573153 C21orf62-AS1Q17RA5 79 aa8.91□□□□□ -0.98
SMG6-212ENST00000573153 DSCR8Q96T75 97 aa8.91□□□□□ -0.98
SMG6-212ENST00000573153 CRCT1Q9UGL9 99 aa8.91□□□□□ -0.98
SMG6-212ENST00000573153 ATXN8Q156A1 80 aa8.89□□□□□ -0.99
SMG6-212ENST00000573153 C9JAW5 83 aa8.87□□□□□ -0.99
SMG6-212ENST00000573153 DEFB116Q30KQ4 102 aa8.87□□□□□ -0.99
SMG6-212ENST00000573153 NOTCH2NLQ7Z3S9 236 aa8.87□□□□□ -0.99
SMG6-212ENST00000573153 VPS25Q9BRG1 176 aa8.85□□□□□ -0.99
SMG6-212ENST00000573153 A0A1B0GW54 56 aa8.84□□□□□ -0.99
SMG6-212ENST00000573153 JMJD7-PLA2G4BH0Y9G9 81 aa8.84□□□□□ -0.99
SMG6-212ENST00000573153 NAA38Q9BRA0 125 aaKnown RBP8.84□□□□□ -0.99
SMG6-212ENST00000573153 C8orf87E5RJ46 101 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms