RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 SPRR1BP22528 89 aa9.25□□□□□ -0.93
HERPUD1-219ENST00000570273 LINC00483Q53H64 154 aa9.25□□□□□ -0.93
HERPUD1-219ENST00000570273 PRO0461Q9UI25 63 aa9.25□□□□□ -0.93
HERPUD1-219ENST00000570273 SRRM2Q9UQ35 2752 aaKnown RBP9.25□□□□□ -0.93
HERPUD1-219ENST00000570273 ANAPC11Q9NYG5 84 aa9.24□□□□□ -0.93
HERPUD1-219ENST00000570273 C3orf22Q8N5N4 141 aa9.23□□□□□ -0.93
HERPUD1-219ENST00000570273 ANKRD29Q8N6D5 301 aa9.23□□□□□ -0.93
HERPUD1-219ENST00000570273 SMCPP49901 116 aaPredicted RBP9.22□□□□□ -0.93
HERPUD1-219ENST00000570273 LAMTOR3Q9UHA4 124 aa9.22□□□□□ -0.93
HERPUD1-219ENST00000570273 F8W1H4 67 aa9.21□□□□□ -0.94
HERPUD1-219ENST00000570273 F8WEM9 126 aa9.21□□□□□ -0.94
HERPUD1-219ENST00000570273 KRTAP1-4P0C5Y4 121 aa9.21□□□□□ -0.94
HERPUD1-219ENST00000570273 NDUFV3P56181 108 aaKnown RBP9.21□□□□□ -0.94
HERPUD1-219ENST00000570273 SMIM29Q86T20 159 aa9.21□□□□□ -0.94
HERPUD1-219ENST00000570273 A0A1B0GV72 72 aa9.2□□□□□ -0.94
HERPUD1-219ENST00000570273 FAM229BQ4G0N7 80 aa9.19□□□□□ -0.94
HERPUD1-219ENST00000570273 IGLV9-49A0A0B4J1Y8 123 aa9.18□□□□□ -0.94
HERPUD1-219ENST00000570273 PKHD1L1Q86WI1 4243 aa9.18□□□□□ -0.94
HERPUD1-219ENST00000570273 C9orf153Q5TBE3 101 aa9.17□□□□□ -0.94
HERPUD1-219ENST00000570273 LINC01600Q96MT4 127 aa9.17□□□□□ -0.94
HERPUD1-219ENST00000570273 A0A087X002 238 aa9.15□□□□□ -0.94
HERPUD1-219ENST00000570273 CRYGAP11844 174 aa9.15□□□□□ -0.94
HERPUD1-219ENST00000570273 MOBPQ13875 183 aa9.14□□□□□ -0.95
HERPUD1-219ENST00000570273 Q8NBF4 154 aa9.14□□□□□ -0.95
HERPUD1-219ENST00000570273 JMJD7-PLA2G4BH0Y9G9 81 aa9.13□□□□□ -0.95
HERPUD1-219ENST00000570273 ETDBQ3ZM63 59 aa9.13□□□□□ -0.95
HERPUD1-219ENST00000570273 RBM3P98179 157 aaKnown RBP9.12□□□□□ -0.95
HERPUD1-219ENST00000570273 KRTAP13-2Q52LG2 175 aa9.12□□□□□ -0.95
HERPUD1-219ENST00000570273 TEN1Q86WV5 123 aa9.12□□□□□ -0.95
HERPUD1-219ENST00000570273 PRR26Q8N8Z3 221 aa9.12□□□□□ -0.95
HERPUD1-219ENST00000570273 IGLV8-61A0A075B6I0 122 aa9.11□□□□□ -0.95
HERPUD1-219ENST00000570273 OBSCN-AS1Q96MR7 158 aa9.1□□□□□ -0.95
HERPUD1-219ENST00000570273 MYCBP2O75592 4640 aa9.1□□□□□ -0.95
HERPUD1-219ENST00000570273 Q6JHZ5 121 aa9.09□□□□□ -0.95
HERPUD1-219ENST00000570273 C14orf132Q9NPU4 83 aa9.09□□□□□ -0.95
HERPUD1-219ENST00000570273 TYMSOSQ8TAI1 123 aa9.08□□□□□ -0.96
HERPUD1-219ENST00000570273 DSCR8Q96T75 97 aa9.08□□□□□ -0.96
HERPUD1-219ENST00000570273 IGFL1Q6UW32 110 aa9.07□□□□□ -0.96
HERPUD1-219ENST00000570273 A0A0G2JQZ4 141 aa9.06□□□□□ -0.96
HERPUD1-219ENST00000570273 TRBV7-4A0A0J9YYF1 115 aa9.06□□□□□ -0.96
HERPUD1-219ENST00000570273 SSBP3-AS1Q7Z2R9 100 aa9.05□□□□□ -0.96
HERPUD1-219ENST00000570273 FLG2Q5D862 2391 aaPredicted RBP9.05□□□□□ -0.96
HERPUD1-219ENST00000570273 LOC110117498A0A087WWA1 95 aa9.04□□□□□ -0.96
HERPUD1-219ENST00000570273 PDE6GP18545 87 aa9.03□□□□□ -0.96
HERPUD1-219ENST00000570273 Q6ZQT0 140 aa9.03□□□□□ -0.96
HERPUD1-219ENST00000570273 VPS25Q9BRG1 176 aa9.03□□□□□ -0.96
HERPUD1-219ENST00000570273 CCKP06307 115 aa9.01□□□□□ -0.97
HERPUD1-219ENST00000570273 HRCT1Q6UXD1 115 aa9□□□□□ -0.97
HERPUD1-219ENST00000570273 LRP1Q07954 4544 aaKnown RBP9□□□□□ -0.97
HERPUD1-219ENST00000570273 A0A1W2PNM2 257 aa8.99□□□□□ -0.97
HERPUD1-219ENST00000570273 OXTP01178 125 aa8.99□□□□□ -0.97
HERPUD1-219ENST00000570273 FAT3Q8TDW7 4589 aa8.98□□□□□ -0.97
HERPUD1-219ENST00000570273 C21orf62-AS1Q17RA5 79 aa8.98□□□□□ -0.97
HERPUD1-219ENST00000570273 LINC00304Q8N9R0 145 aa8.98□□□□□ -0.97
HERPUD1-219ENST00000570273 KRTAP10-8P60410 259 aa8.97□□□□□ -0.97
HERPUD1-219ENST00000570273 C4orf48Q5BLP8 95 aa8.97□□□□□ -0.97
HERPUD1-219ENST00000570273 CD164Q04900 197 aa8.96□□□□□ -0.98
HERPUD1-219ENST00000570273 Q6Q795 121 aa8.96□□□□□ -0.98
HERPUD1-219ENST00000570273 TRBV7-7A0A0K0K1E9 115 aa8.94□□□□□ -0.98
HERPUD1-219ENST00000570273 KRTAP29-1A8MX34 341 aaPredicted RBP8.94□□□□□ -0.98
HERPUD1-219ENST00000570273 MT1HL1P0DM35 61 aa8.94□□□□□ -0.98
HERPUD1-219ENST00000570273 A0A087WSZ3 146 aa8.92□□□□□ -0.98
HERPUD1-219ENST00000570273 SPAG11AQ6PDA7 123 aa8.92□□□□□ -0.98
HERPUD1-219ENST00000570273 SPINK1P00995 79 aa8.9□□□□□ -0.98
HERPUD1-219ENST00000570273 DMBT1Q9UGM3 2413 aaPredicted RBP8.9□□□□□ -0.98
HERPUD1-219ENST00000570273 J3QR89 54 aa8.89□□□□□ -0.99
HERPUD1-219ENST00000570273 A0A1B0GW54 56 aa8.88□□□□□ -0.99
HERPUD1-219ENST00000570273 LIMD2Q9BT23 127 aa8.88□□□□□ -0.99
HERPUD1-219ENST00000570273 TNXBP22105 4242 aa8.88□□□□□ -0.99
HERPUD1-219ENST00000570273 J3QL48 77 aa8.88□□□□□ -0.99
HERPUD1-219ENST00000570273 SS18L2Q9UHA2 77 aa8.88□□□□□ -0.99
HERPUD1-219ENST00000570273 HERC1Q15751 4861 aa8.86□□□□□ -0.99
HERPUD1-219ENST00000570273 FAM240AA0A1B0GVK7 77 aa8.86□□□□□ -0.99
HERPUD1-219ENST00000570273 RPS29P62273 56 aaKnown RBP8.86□□□□□ -0.99
HERPUD1-219ENST00000570273 K7ERU9 68 aa8.84□□□□□ -0.99
HERPUD1-219ENST00000570273 ACYP1P07311 99 aa8.84□□□□□ -0.99
HERPUD1-219ENST00000570273 LINC00846Q9NV44 126 aa8.84□□□□□ -0.99
HERPUD1-219ENST00000570273 Q5XG85 94 aa8.83□□□□□ -1
HERPUD1-219ENST00000570273 NREPQ16612 68 aa8.81□□□□□ -1
HERPUD1-219ENST00000570273 UBL5Q9BZL1 73 aa8.8□□□□□ -1
HERPUD1-219ENST00000570273 Q6ZVQ6 151 aa8.8□□□□□ -1
HERPUD1-219ENST00000570273 ASB16-AS1Q495Z4 193 aa8.79□□□□□ -1
HERPUD1-219ENST00000570273 C1orf195Q5TG92 126 aa8.75□□□□□ -1.01
HERPUD1-219ENST00000570273 Q96NJ1 140 aa8.75□□□□□ -1.01
HERPUD1-219ENST00000570273 LINC00472Q9H8W2 130 aa8.75□□□□□ -1.01
HERPUD1-219ENST00000570273 DEFB116Q30KQ4 102 aa8.74□□□□□ -1.01
HERPUD1-219ENST00000570273 RETNLBQ9BQ08 111 aa8.74□□□□□ -1.01
HERPUD1-219ENST00000570273 SIGMAR1Q99720 223 aa8.73□□□□□ -1.01
HERPUD1-219ENST00000570273 IGKV4-1P06312 121 aa8.71□□□□□ -1.01
HERPUD1-219ENST00000570273 BPY2O14599 106 aa8.71□□□□□ -1.02
HERPUD1-219ENST00000570273 CDIP1Q9H305 208 aa8.71□□□□□ -1.02
HERPUD1-219ENST00000570273 J3KT08 172 aa8.7□□□□□ -1.02
HERPUD1-219ENST00000570273 LINC00643Q86TS7 51 aa8.68□□□□□ -1.02
HERPUD1-219ENST00000570273 ATP5EP2Q5VTU8 51 aa8.66□□□□□ -1.02
HERPUD1-219ENST00000570273 IGKV3D-7A0A0C4DH55 119 aa8.65□□□□□ -1.02
HERPUD1-219ENST00000570273 CXCL6P80162 114 aa8.64□□□□□ -1.03
HERPUD1-219ENST00000570273 FP248Q71RG6 208 aaPredicted RBP8.64□□□□□ -1.03
HERPUD1-219ENST00000570273 A8MWP4 228 aa8.63□□□□□ -1.03
HERPUD1-219ENST00000570273 DSCR10P59022 87 aa8.63□□□□□ -1.03
HERPUD1-219ENST00000570273 PRR4Q16378 134 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms