RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 Q6ZRN7 208 aaPredicted RBP3.86□□□□□ -1.79
CYLD-216ENST00000569891 LINC00336Q6ZUF6 198 aa3.86□□□□□ -1.79
CYLD-216ENST00000569891 DEFB105AQ8NG35 78 aa3.86□□□□□ -1.79
CYLD-216ENST00000569891 BCE1O60756 84 aa3.85□□□□□ -1.79
CYLD-216ENST00000569891 SDIM1Q6ZPB5 146 aa3.85□□□□□ -1.79
CYLD-216ENST00000569891 UBR4Q5T4S7 5183 aa3.85□□□□□ -1.79
CYLD-216ENST00000569891 PCP4P48539 62 aa3.85□□□□□ -1.79
CYLD-216ENST00000569891 Q8NDZ9 215 aa3.85□□□□□ -1.79
CYLD-216ENST00000569891 HIGD2AQ9BW72 106 aa3.85□□□□□ -1.79
CYLD-216ENST00000569891 CDIP1Q9H305 208 aa3.85□□□□□ -1.79
CYLD-216ENST00000569891 Q6ZQT0 140 aa3.84□□□□□ -1.79
CYLD-216ENST00000569891 IGLV5-48A0A075B6I7 105 aa3.84□□□□□ -1.8
CYLD-216ENST00000569891 TRBV7-7A0A0K0K1E9 115 aa3.84□□□□□ -1.8
CYLD-216ENST00000569891 FAM168BA1KXE4 195 aa3.84□□□□□ -1.8
CYLD-216ENST00000569891 RPL37AP61513 92 aaKnown RBP3.83□□□□□ -1.8
CYLD-216ENST00000569891 NREPQ16612 68 aa3.83□□□□□ -1.8
CYLD-216ENST00000569891 SPACA4Q8TDM5 124 aa3.83□□□□□ -1.8
CYLD-216ENST00000569891 XGP55808 180 aa3.83□□□□□ -1.8
CYLD-216ENST00000569891 SMIM20Q8N5G0 67 aa3.83□□□□□ -1.8
CYLD-216ENST00000569891 SMCR5Q8TEV8 140 aa3.83□□□□□ -1.8
CYLD-216ENST00000569891 TRBV7-4A0A0J9YYF1 115 aa3.83□□□□□ -1.8
CYLD-216ENST00000569891 FAT4Q6V0I7 4981 aa3.82□□□□□ -1.8
CYLD-216ENST00000569891 A0A1W2PNN7 141 aa3.82□□□□□ -1.8
CYLD-216ENST00000569891 MT-ATP8P03928 68 aa3.82□□□□□ -1.8
CYLD-216ENST00000569891 HIST1H4AP62805 103 aaKnown RBP3.82□□□□□ -1.8
CYLD-216ENST00000569891 C1orf137Q5JT78 98 aa3.82□□□□□ -1.8
CYLD-216ENST00000569891 PHF5AQ7RTV0 110 aaKnown RBP3.82□□□□□ -1.8
CYLD-216ENST00000569891 ANAPC13Q9BS18 74 aa3.82□□□□□ -1.8
CYLD-216ENST00000569891 KRTAP4-16G5E9R7 235 aaPredicted RBP3.82□□□□□ -1.8
CYLD-216ENST00000569891 ATOX1O00244 68 aa3.82□□□□□ -1.8
CYLD-216ENST00000569891 PLAC8Q9NZF1 115 aa3.82□□□□□ -1.8
CYLD-216ENST00000569891 CXCL6P80162 114 aa3.82□□□□□ -1.8
CYLD-216ENST00000569891 HAMPP81172 84 aa3.82□□□□□ -1.8
CYLD-216ENST00000569891 SS18L2Q9UHA2 77 aa3.81□□□□□ -1.8
CYLD-216ENST00000569891 EPM2AB3EWF7 344 aa3.81□□□□□ -1.8
CYLD-216ENST00000569891 LRP2P98164 4655 aa3.81□□□□□ -1.8
CYLD-216ENST00000569891 CHTF8P0CG12 524 aa3.8□□□□□ -1.8
CYLD-216ENST00000569891 SPRR1BP22528 89 aa3.8□□□□□ -1.8
CYLD-216ENST00000569891 Q8N377 158 aa3.8□□□□□ -1.8
CYLD-216ENST00000569891 Q9BRP9 147 aa3.8□□□□□ -1.8
CYLD-216ENST00000569891 LINC00846Q9NV44 126 aa3.8□□□□□ -1.8
CYLD-216ENST00000569891 PRLHP81277 87 aa3.8□□□□□ -1.8
CYLD-216ENST00000569891 Q8NBF4 154 aa3.8□□□□□ -1.8
CYLD-216ENST00000569891 H3BS24 57 aa3.79□□□□□ -1.8
CYLD-216ENST00000569891 BPY2O14599 106 aa3.79□□□□□ -1.8
CYLD-216ENST00000569891 ZNF861PO60384 105 aa3.78□□□□□ -1.8
CYLD-216ENST00000569891 Q6ZVQ6 151 aa3.78□□□□□ -1.8
CYLD-216ENST00000569891 IGLV8-61A0A075B6I0 122 aa3.78□□□□□ -1.8
CYLD-216ENST00000569891 J3KT08 172 aa3.77□□□□□ -1.81
CYLD-216ENST00000569891 IGKV3D-7A0A0C4DH55 119 aa3.77□□□□□ -1.81
CYLD-216ENST00000569891 LCE6AA0A183 80 aa3.77□□□□□ -1.81
CYLD-216ENST00000569891 C9orf153Q5TBE3 101 aa3.77□□□□□ -1.81
CYLD-216ENST00000569891 FAM236AA0A1B0GUQ0 79 aa3.77□□□□□ -1.81
CYLD-216ENST00000569891 FAM236BA0A1B0GV22 79 aa3.77□□□□□ -1.81
CYLD-216ENST00000569891 NDUFB1O75438 58 aa3.77□□□□□ -1.81
CYLD-216ENST00000569891 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.76□□□□□ -1.81
CYLD-216ENST00000569891 NDUFS5O43920 106 aa3.76□□□□□ -1.81
CYLD-216ENST00000569891 KRTAP7-1Q8IUC3 87 aa3.76□□□□□ -1.81
CYLD-216ENST00000569891 ST20-AS1Q8NBB2 130 aa3.76□□□□□ -1.81
CYLD-216ENST00000569891 LINC01547P58512 204 aaPredicted RBP3.76□□□□□ -1.81
CYLD-216ENST00000569891 SPRR4Q96PI1 79 aa3.76□□□□□ -1.81
CYLD-216ENST00000569891 STAB2Q8WWQ8 2551 aa3.76□□□□□ -1.81
CYLD-216ENST00000569891 CRYGAP11844 174 aa3.75□□□□□ -1.81
CYLD-216ENST00000569891 IGLV7-43P04211 117 aa3.75□□□□□ -1.81
CYLD-216ENST00000569891 PSORS1C2Q9UIG4 136 aa3.75□□□□□ -1.81
CYLD-216ENST00000569891 ERC2-IT1O76042 136 aa3.74□□□□□ -1.81
CYLD-216ENST00000569891 SSBP3-AS1Q7Z2R9 100 aa3.74□□□□□ -1.81
CYLD-216ENST00000569891 UQCRQO14949 82 aa3.73□□□□□ -1.81
CYLD-216ENST00000569891 LINC00483Q53H64 154 aa3.73□□□□□ -1.81
CYLD-216ENST00000569891 IGFL1Q6UW32 110 aa3.73□□□□□ -1.81
CYLD-216ENST00000569891 CD164Q04900 197 aa3.72□□□□□ -1.81
CYLD-216ENST00000569891 SERP2Q8N6R1 65 aa3.72□□□□□ -1.81
CYLD-216ENST00000569891 FAM229BQ4G0N7 80 aa3.72□□□□□ -1.81
CYLD-216ENST00000569891 KRTAP13-1Q8IUC0 172 aa3.72□□□□□ -1.81
CYLD-216ENST00000569891 SMIM29Q86T20 159 aa3.71□□□□□ -1.81
CYLD-216ENST00000569891 IGLV9-49A0A0B4J1Y8 123 aa3.71□□□□□ -1.82
CYLD-216ENST00000569891 C3orf22Q8N5N4 141 aa3.71□□□□□ -1.82
CYLD-216ENST00000569891 A0A087WSZ3 146 aa3.71□□□□□ -1.82
CYLD-216ENST00000569891 A0A1W2PNM2 257 aa3.71□□□□□ -1.82
CYLD-216ENST00000569891 CIRBP-AS1Q8TBR5 109 aa3.71□□□□□ -1.82
CYLD-216ENST00000569891 LIMD2Q9BT23 127 aa3.71□□□□□ -1.82
CYLD-216ENST00000569891 TRAV7A0A075B6U4 112 aa3.7□□□□□ -1.82
CYLD-216ENST00000569891 LCE2BO14633 110 aa3.7□□□□□ -1.82
CYLD-216ENST00000569891 COX7CP15954 63 aa3.7□□□□□ -1.82
CYLD-216ENST00000569891 SCXQ7RTU7 201 aa3.7□□□□□ -1.82
CYLD-216ENST00000569891 Q6ZSA8 131 aa3.7□□□□□ -1.82
CYLD-216ENST00000569891 PANO1I0J062 215 aa3.69□□□□□ -1.82
CYLD-216ENST00000569891 NDUFC1O43677 76 aa3.68□□□□□ -1.82
CYLD-216ENST00000569891 KRTAP10-2P60368 255 aa3.68□□□□□ -1.82
CYLD-216ENST00000569891 MOBPQ13875 183 aa3.68□□□□□ -1.82
CYLD-216ENST00000569891 SPINK6Q6UWN8 80 aa3.68□□□□□ -1.82
CYLD-216ENST00000569891 PLA2G1BP04054 148 aaKnown RBP3.67□□□□□ -1.82
CYLD-216ENST00000569891 KRTAP10-1P60331 282 aa3.67□□□□□ -1.82
CYLD-216ENST00000569891 SPAG11AQ6PDA7 123 aa3.67□□□□□ -1.82
CYLD-216ENST00000569891 A8MWP4 228 aa3.67□□□□□ -1.82
CYLD-216ENST00000569891 HCG22E2RYF7 251 aa3.67□□□□□ -1.82
CYLD-216ENST00000569891 MP68P56378 58 aa3.66□□□□□ -1.82
CYLD-216ENST00000569891 A0A087WVE0 104 aa3.66□□□□□ -1.82
CYLD-216ENST00000569891 CHKB-CPT1BH3BT56 60 aa3.65□□□□□ -1.82
CYLD-216ENST00000569891 KRTAP11-1Q8IUC1 163 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms