RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 A0A087X002 238 aa13.88□□□□□ -0.19
RAB40C-212ENST00000569575 TCL1BO95988 128 aa13.88□□□□□ -0.19
RAB40C-212ENST00000569575 SSBP3-AS1Q7Z2R9 100 aa13.88□□□□□ -0.19
RAB40C-212ENST00000569575 ANAPC11Q9NYG5 84 aa13.88□□□□□ -0.19
RAB40C-212ENST00000569575 TMEM256-PLSCR3K7ERE1 68 aa13.87□□□□□ -0.19
RAB40C-212ENST00000569575 TYMSOSQ8TAI1 123 aa13.86□□□□□ -0.19
RAB40C-212ENST00000569575 SMIM29Q86T20 159 aa13.84□□□□□ -0.19
RAB40C-212ENST00000569575 F8WEM9 126 aa13.83□□□□□ -0.2
RAB40C-212ENST00000569575 KRTAP13-2Q52LG2 175 aa13.83□□□□□ -0.2
RAB40C-212ENST00000569575 J3QL48 77 aa13.82□□□□□ -0.2
RAB40C-212ENST00000569575 Q8NBF4 154 aa13.82□□□□□ -0.2
RAB40C-212ENST00000569575 MT1HL1P0DM35 61 aa13.8□□□□□ -0.2
RAB40C-212ENST00000569575 IGLV9-49A0A0B4J1Y8 123 aa13.79□□□□□ -0.2
RAB40C-212ENST00000569575 UBE2V1Q13404 147 aa13.79□□□□□ -0.2
RAB40C-212ENST00000569575 C3orf22Q8N5N4 141 aa13.78□□□□□ -0.2
RAB40C-212ENST00000569575 SPCS1Q9Y6A9 102 aa13.78□□□□□ -0.2
RAB40C-212ENST00000569575 IGLV8-61A0A075B6I0 122 aa13.77□□□□□ -0.21
RAB40C-212ENST00000569575 NDUFV3P56181 108 aaKnown RBP13.77□□□□□ -0.21
RAB40C-212ENST00000569575 C9orf153Q5TBE3 101 aa13.77□□□□□ -0.21
RAB40C-212ENST00000569575 SPAG11AQ6PDA7 123 aa13.77□□□□□ -0.21
RAB40C-212ENST00000569575 BAALC-AS2P0C853 105 aa13.76□□□□□ -0.21
RAB40C-212ENST00000569575 MOBPQ13875 183 aa13.76□□□□□ -0.21
RAB40C-212ENST00000569575 Q6JHZ5 121 aa13.76□□□□□ -0.21
RAB40C-212ENST00000569575 GTF2H5Q6ZYL4 71 aa13.73□□□□□ -0.21
RAB40C-212ENST00000569575 ABCA13Q86UQ4 5058 aa13.73□□□□□ -0.21
RAB40C-212ENST00000569575 C4orf48Q5BLP8 95 aa13.72□□□□□ -0.21
RAB40C-212ENST00000569575 LINC00304Q8N9R0 145 aa13.71□□□□□ -0.21
RAB40C-212ENST00000569575 C9JAW5 83 aa13.7□□□□□ -0.22
RAB40C-212ENST00000569575 H3BMG7 143 aa13.7□□□□□ -0.22
RAB40C-212ENST00000569575 K7EP34 96 aa13.7□□□□□ -0.22
RAB40C-212ENST00000569575 H3BT86 120 aa13.69□□□□□ -0.22
RAB40C-212ENST00000569575 CD164Q04900 197 aa13.69□□□□□ -0.22
RAB40C-212ENST00000569575 SPINK1P00995 79 aa13.68□□□□□ -0.22
RAB40C-212ENST00000569575 ANKRD29Q8N6D5 301 aa13.67□□□□□ -0.22
RAB40C-212ENST00000569575 MYCBP2O75592 4640 aa13.67□□□□□ -0.22
RAB40C-212ENST00000569575 RPS29P62273 56 aaKnown RBP13.66□□□□□ -0.22
RAB40C-212ENST00000569575 LRP1Q07954 4544 aaKnown RBP13.66□□□□□ -0.22
RAB40C-212ENST00000569575 JMJD7-PLA2G4BH0Y9G9 81 aa13.65□□□□□ -0.22
RAB40C-212ENST00000569575 DMBT1Q9UGM3 2413 aaPredicted RBP13.64□□□□□ -0.23
RAB40C-212ENST00000569575 FAT3Q8TDW7 4589 aa13.63□□□□□ -0.23
RAB40C-212ENST00000569575 RBM3P98179 157 aaKnown RBP13.61□□□□□ -0.23
RAB40C-212ENST00000569575 C21orf62-AS1Q17RA5 79 aa13.6□□□□□ -0.23
RAB40C-212ENST00000569575 IGFL1Q6UW32 110 aa13.59□□□□□ -0.23
RAB40C-212ENST00000569575 Q6Q795 121 aa13.58□□□□□ -0.24
RAB40C-212ENST00000569575 PDE6GP18545 87 aa13.57□□□□□ -0.24
RAB40C-212ENST00000569575 DSCR8Q96T75 97 aa13.57□□□□□ -0.24
RAB40C-212ENST00000569575 F8W1H4 67 aa13.56□□□□□ -0.24
RAB40C-212ENST00000569575 TEN1Q86WV5 123 aa13.55□□□□□ -0.24
RAB40C-212ENST00000569575 PCLOQ9Y6V0 5065 aa13.55□□□□□ -0.24
RAB40C-212ENST00000569575 Q5XG85 94 aa13.54□□□□□ -0.24
RAB40C-212ENST00000569575 LIMD2Q9BT23 127 aa13.54□□□□□ -0.24
RAB40C-212ENST00000569575 TRBV7-4A0A0J9YYF1 115 aa13.53□□□□□ -0.24
RAB40C-212ENST00000569575 OBSCN-AS1Q96MR7 158 aa13.53□□□□□ -0.24
RAB40C-212ENST00000569575 TNXBP22105 4242 aa13.52□□□□□ -0.25
RAB40C-212ENST00000569575 PRO0461Q9UI25 63 aa13.51□□□□□ -0.25
RAB40C-212ENST00000569575 LOC110117498A0A087WWA1 95 aa13.48□□□□□ -0.25
RAB40C-212ENST00000569575 A0A1B0GW54 56 aa13.48□□□□□ -0.25
RAB40C-212ENST00000569575 TRBV7-7A0A0K0K1E9 115 aa13.47□□□□□ -0.25
RAB40C-212ENST00000569575 MTURNQ8N3F0 131 aa13.47□□□□□ -0.25
RAB40C-212ENST00000569575 SMCPP49901 116 aaPredicted RBP13.46□□□□□ -0.25
RAB40C-212ENST00000569575 HRCT1Q6UXD1 115 aa13.44□□□□□ -0.26
RAB40C-212ENST00000569575 SS18L2Q9UHA2 77 aa13.44□□□□□ -0.26
RAB40C-212ENST00000569575 A0A0G2JQZ4 141 aa13.43□□□□□ -0.26
RAB40C-212ENST00000569575 CCKP06307 115 aa13.43□□□□□ -0.26
RAB40C-212ENST00000569575 A0A1B0GV72 72 aa13.41□□□□□ -0.26
RAB40C-212ENST00000569575 A0A1B0GV90 55 aa13.41□□□□□ -0.26
RAB40C-212ENST00000569575 A0A1W2PNM2 257 aa13.41□□□□□ -0.26
RAB40C-212ENST00000569575 ASB16-AS1Q495Z4 193 aa13.41□□□□□ -0.26
RAB40C-212ENST00000569575 Q6ZQT0 140 aa13.4□□□□□ -0.26
RAB40C-212ENST00000569575 C14orf132Q9NPU4 83 aa13.38□□□□□ -0.27
RAB40C-212ENST00000569575 FP248Q71RG6 208 aaPredicted RBP13.36□□□□□ -0.27
RAB40C-212ENST00000569575 A0A087WSZ3 146 aa13.32□□□□□ -0.28
RAB40C-212ENST00000569575 VPS25Q9BRG1 176 aa13.31□□□□□ -0.28
RAB40C-212ENST00000569575 ETDBQ3ZM63 59 aa13.28□□□□□ -0.28
RAB40C-212ENST00000569575 C1orf195Q5TG92 126 aa13.25□□□□□ -0.29
RAB40C-212ENST00000569575 PRR4Q16378 134 aa13.22□□□□□ -0.29
RAB40C-212ENST00000569575 RETNLBQ9BQ08 111 aa13.22□□□□□ -0.29
RAB40C-212ENST00000569575 IGLV7-46A0A075B6I9 117 aa13.2□□□□□ -0.3
RAB40C-212ENST00000569575 LINC00472Q9H8W2 130 aa13.15□□□□□ -0.3
RAB40C-212ENST00000569575 J3KT08 172 aa13.14□□□□□ -0.31
RAB40C-212ENST00000569575 TPRXLQ17RH7 258 aa13.13□□□□□ -0.31
RAB40C-212ENST00000569575 NREPQ16612 68 aa13.12□□□□□ -0.31
RAB40C-212ENST00000569575 Q96NJ1 140 aa13.12□□□□□ -0.31
RAB40C-212ENST00000569575 ACYP1P07311 99 aa13.11□□□□□ -0.31
RAB40C-212ENST00000569575 FAM240AA0A1B0GVK7 77 aa13.06□□□□□ -0.32
RAB40C-212ENST00000569575 UBL5Q9BZL1 73 aa13.06□□□□□ -0.32
RAB40C-212ENST00000569575 IGKV4-1P06312 121 aa13.05□□□□□ -0.32
RAB40C-212ENST00000569575 HERC1Q15751 4861 aa13.04□□□□□ -0.32
RAB40C-212ENST00000569575 KRTAP13-3Q3SY46 172 aa13.03□□□□□ -0.32
RAB40C-212ENST00000569575 J3QR89 54 aa13.02□□□□□ -0.33
RAB40C-212ENST00000569575 SIGMAR1Q99720 223 aa13□□□□□ -0.33
RAB40C-212ENST00000569575 LINC00846Q9NV44 126 aa13□□□□□ -0.33
RAB40C-212ENST00000569575 NDUFB1O75438 58 aa12.99□□□□□ -0.33
RAB40C-212ENST00000569575 Q6ZVQ6 151 aa12.99□□□□□ -0.33
RAB40C-212ENST00000569575 CDIP1Q9H305 208 aa12.96□□□□□ -0.33
RAB40C-212ENST00000569575 DEFB116Q30KQ4 102 aa12.95□□□□□ -0.34
RAB40C-212ENST00000569575 BPY2O14599 106 aa12.94□□□□□ -0.34
RAB40C-212ENST00000569575 A8MWP4 228 aa12.93□□□□□ -0.34
RAB40C-212ENST00000569575 C8orf87E5RJ46 101 aa12.91□□□□□ -0.34
RAB40C-212ENST00000569575 A0A1B0GVX0 72 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms