RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 Q6ZQY7 126 aa6.26□□□□□ -1.41
CDH3-210ENST00000569117 IGLV5-48A0A075B6I7 105 aa6.25□□□□□ -1.41
CDH3-210ENST00000569117 TRACP01848 142 aa6.25□□□□□ -1.41
CDH3-210ENST00000569117 LINC00483Q53H64 154 aa6.25□□□□□ -1.41
CDH3-210ENST00000569117 ST20-AS1Q8NBB2 130 aa6.25□□□□□ -1.41
CDH3-210ENST00000569117 TRBV20-1A0A075B6N2 111 aa6.24□□□□□ -1.41
CDH3-210ENST00000569117 TCL1BO95988 128 aa6.24□□□□□ -1.41
CDH3-210ENST00000569117 FABP2P12104 132 aa6.24□□□□□ -1.41
CDH3-210ENST00000569117 DNAL4O96015 105 aa6.23□□□□□ -1.41
CDH3-210ENST00000569117 SPRR1BP22528 89 aa6.23□□□□□ -1.41
CDH3-210ENST00000569117 LINC01547P58512 204 aaPredicted RBP6.23□□□□□ -1.41
CDH3-210ENST00000569117 ATXN8Q156A1 80 aa6.23□□□□□ -1.41
CDH3-210ENST00000569117 FAM229BQ4G0N7 80 aa6.23□□□□□ -1.41
CDH3-210ENST00000569117 OCIAD2Q56VL3 154 aa6.23□□□□□ -1.41
CDH3-210ENST00000569117 PPDPFLQ8WWR9 84 aa6.22□□□□□ -1.41
CDH3-210ENST00000569117 TEX49A0A1B0GTD5 131 aa6.21□□□□□ -1.42
CDH3-210ENST00000569117 SPCS1Q9Y6A9 102 aa6.21□□□□□ -1.42
CDH3-210ENST00000569117 FLG2Q5D862 2391 aaPredicted RBP6.21□□□□□ -1.42
CDH3-210ENST00000569117 Q8N377 158 aa6.2□□□□□ -1.42
CDH3-210ENST00000569117 DEFB105AQ8NG35 78 aa6.2□□□□□ -1.42
CDH3-210ENST00000569117 ORMDL1Q9P0S3 153 aa6.2□□□□□ -1.42
CDH3-210ENST00000569117 A0A087X002 238 aa6.19□□□□□ -1.42
CDH3-210ENST00000569117 CRYGAP11844 174 aa6.19□□□□□ -1.42
CDH3-210ENST00000569117 ANAPC11Q9NYG5 84 aa6.19□□□□□ -1.42
CDH3-210ENST00000569117 ABCA13Q86UQ4 5058 aa6.19□□□□□ -1.42
CDH3-210ENST00000569117 MYCBP2O75592 4640 aa6.18□□□□□ -1.42
CDH3-210ENST00000569117 H3BQ85 93 aa6.18□□□□□ -1.42
CDH3-210ENST00000569117 K7EP34 96 aa6.18□□□□□ -1.42
CDH3-210ENST00000569117 SMIM29Q86T20 159 aa6.18□□□□□ -1.42
CDH3-210ENST00000569117 LINC01600Q96MT4 127 aa6.18□□□□□ -1.42
CDH3-210ENST00000569117 H3BMG7 143 aa6.17□□□□□ -1.42
CDH3-210ENST00000569117 KRTAP13-2Q52LG2 175 aa6.17□□□□□ -1.42
CDH3-210ENST00000569117 C3orf22Q8N5N4 141 aa6.17□□□□□ -1.42
CDH3-210ENST00000569117 LRP1Q07954 4544 aaKnown RBP6.16□□□□□ -1.42
CDH3-210ENST00000569117 C9JAW5 83 aa6.16□□□□□ -1.42
CDH3-210ENST00000569117 TMEM256-PLSCR3K7ERE1 68 aa6.16□□□□□ -1.42
CDH3-210ENST00000569117 OXTP01178 125 aa6.16□□□□□ -1.42
CDH3-210ENST00000569117 LAMTOR3Q9UHA4 124 aa6.16□□□□□ -1.42
CDH3-210ENST00000569117 FAT3Q8TDW7 4589 aa6.16□□□□□ -1.42
CDH3-210ENST00000569117 IGLV9-49A0A0B4J1Y8 123 aa6.14□□□□□ -1.43
CDH3-210ENST00000569117 KRTAP29-1A8MX34 341 aaPredicted RBP6.14□□□□□ -1.43
CDH3-210ENST00000569117 F8WEM9 126 aa6.14□□□□□ -1.43
CDH3-210ENST00000569117 H3BT86 120 aa6.14□□□□□ -1.43
CDH3-210ENST00000569117 BAALC-AS2P0C853 105 aa6.14□□□□□ -1.43
CDH3-210ENST00000569117 MOBPQ13875 183 aa6.14□□□□□ -1.43
CDH3-210ENST00000569117 GTF2H5Q6ZYL4 71 aa6.14□□□□□ -1.43
CDH3-210ENST00000569117 Q8NBF4 154 aa6.14□□□□□ -1.43
CDH3-210ENST00000569117 MT1HL1P0DM35 61 aa6.13□□□□□ -1.43
CDH3-210ENST00000569117 NDUFV3P56181 108 aaKnown RBP6.13□□□□□ -1.43
CDH3-210ENST00000569117 C9orf153Q5TBE3 101 aa6.13□□□□□ -1.43
CDH3-210ENST00000569117 IGLV8-61A0A075B6I0 122 aa6.12□□□□□ -1.43
CDH3-210ENST00000569117 KRTAP10-8P60410 259 aa6.12□□□□□ -1.43
CDH3-210ENST00000569117 MTURNQ8N3F0 131 aa6.12□□□□□ -1.43
CDH3-210ENST00000569117 TYMSOSQ8TAI1 123 aa6.12□□□□□ -1.43
CDH3-210ENST00000569117 A0A1B0GV90 55 aa6.11□□□□□ -1.43
CDH3-210ENST00000569117 SSBP3-AS1Q7Z2R9 100 aa6.11□□□□□ -1.43
CDH3-210ENST00000569117 ANKRD29Q8N6D5 301 aa6.11□□□□□ -1.43
CDH3-210ENST00000569117 PRO0461Q9UI25 63 aa6.11□□□□□ -1.43
CDH3-210ENST00000569117 TNXBP22105 4242 aa6.1□□□□□ -1.43
CDH3-210ENST00000569117 KRTAP15-1Q3LI76 137 aa6.09□□□□□ -1.43
CDH3-210ENST00000569117 Q6JHZ5 121 aa6.09□□□□□ -1.43
CDH3-210ENST00000569117 PCLOQ9Y6V0 5065 aa6.08□□□□□ -1.44
CDH3-210ENST00000569117 JMJD7-PLA2G4BH0Y9G9 81 aa6.07□□□□□ -1.44
CDH3-210ENST00000569117 LINC00304Q8N9R0 145 aa6.07□□□□□ -1.44
CDH3-210ENST00000569117 F8W1H4 67 aa6.06□□□□□ -1.44
CDH3-210ENST00000569117 IGFL1Q6UW32 110 aa6.06□□□□□ -1.44
CDH3-210ENST00000569117 OBSCN-AS1Q96MR7 158 aa6.06□□□□□ -1.44
CDH3-210ENST00000569117 TRBV7-4A0A0J9YYF1 115 aa6.05□□□□□ -1.44
CDH3-210ENST00000569117 A0A1B0GV72 72 aa6.05□□□□□ -1.44
CDH3-210ENST00000569117 RBM3P98179 157 aaKnown RBP6.05□□□□□ -1.44
CDH3-210ENST00000569117 SPAG11AQ6PDA7 123 aa6.05□□□□□ -1.44
CDH3-210ENST00000569117 DMBT1Q9UGM3 2413 aaPredicted RBP6.05□□□□□ -1.44
CDH3-210ENST00000569117 A0A0G2JQZ4 141 aa6.04□□□□□ -1.44
CDH3-210ENST00000569117 CD164Q04900 197 aa6.04□□□□□ -1.44
CDH3-210ENST00000569117 KRTAP4-8Q9BYQ9 185 aa6.04□□□□□ -1.44
CDH3-210ENST00000569117 DSCR8Q96T75 97 aa6.03□□□□□ -1.44
CDH3-210ENST00000569117 LOC110117498A0A087WWA1 95 aa6.02□□□□□ -1.45
CDH3-210ENST00000569117 SPINK1P00995 79 aa6.02□□□□□ -1.45
CDH3-210ENST00000569117 RPS29P62273 56 aaKnown RBP6.02□□□□□ -1.45
CDH3-210ENST00000569117 Q6Q795 121 aa6.02□□□□□ -1.45
CDH3-210ENST00000569117 TEN1Q86WV5 123 aa6.02□□□□□ -1.45
CDH3-210ENST00000569117 PDE6GP18545 87 aa6.01□□□□□ -1.45
CDH3-210ENST00000569117 C14orf132Q9NPU4 83 aa6.01□□□□□ -1.45
CDH3-210ENST00000569117 A0A1W2PNM2 257 aa6□□□□□ -1.45
CDH3-210ENST00000569117 Q6ZQT0 140 aa6□□□□□ -1.45
CDH3-210ENST00000569117 TRBV7-7A0A0K0K1E9 115 aa5.99□□□□□ -1.45
CDH3-210ENST00000569117 CCKP06307 115 aa5.99□□□□□ -1.45
CDH3-210ENST00000569117 HRCT1Q6UXD1 115 aa5.99□□□□□ -1.45
CDH3-210ENST00000569117 KRTAP19-1Q8IUB9 90 aa5.99□□□□□ -1.45
CDH3-210ENST00000569117 ETDBQ3ZM63 59 aa5.98□□□□□ -1.45
CDH3-210ENST00000569117 Q5XG85 94 aa5.98□□□□□ -1.45
CDH3-210ENST00000569117 LIMD2Q9BT23 127 aa5.98□□□□□ -1.45
CDH3-210ENST00000569117 Q6ZVQ6 151 aa5.97□□□□□ -1.45
CDH3-210ENST00000569117 KRTAP9-6A0A140TA67 174 aa5.96□□□□□ -1.46
CDH3-210ENST00000569117 KRTAP9-7A8MTY7 169 aa5.96□□□□□ -1.46
CDH3-210ENST00000569117 VPS25Q9BRG1 176 aa5.96□□□□□ -1.46
CDH3-210ENST00000569117 A0A1B0GW54 56 aa5.95□□□□□ -1.46
CDH3-210ENST00000569117 SS18L2Q9UHA2 77 aa5.95□□□□□ -1.46
CDH3-210ENST00000569117 A0A087WSZ3 146 aa5.94□□□□□ -1.46
CDH3-210ENST00000569117 ASB16-AS1Q495Z4 193 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms