RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 CRIPTQ9P021 101 aa2.54□□□□□ -2
UBR1-208ENST00000569066 WNK1Q9H4A3 2382 aa2.54□□□□□ -2
UBR1-208ENST00000569066 A0A1B0GU69 56 aa2.54□□□□□ -2
UBR1-208ENST00000569066 DEFB108BQ8NET1 73 aa2.54□□□□□ -2
UBR1-208ENST00000569066 DMAC1Q96GE9 116 aa2.53□□□□□ -2
UBR1-208ENST00000569066 PKDREJQ9NTG1 2253 aa2.53□□□□□ -2
UBR1-208ENST00000569066 PTPRZ1P23471 2315 aaPredicted RBP2.53□□□□□ -2
UBR1-208ENST00000569066 PSORS1C2Q9UIG4 136 aa2.53□□□□□ -2
UBR1-208ENST00000569066 ACACAQ13085 2346 aa2.53□□□□□ -2.01
UBR1-208ENST00000569066 CACNA1EQ15878 2313 aa2.53□□□□□ -2.01
UBR1-208ENST00000569066 TRGV1A0A0A0MS02 117 aa2.52□□□□□ -2.01
UBR1-208ENST00000569066 A0A0G2JQZ4 141 aa2.52□□□□□ -2.01
UBR1-208ENST00000569066 CRYBG3Q68DQ2 2970 aa2.52□□□□□ -2.01
UBR1-208ENST00000569066 SPTBN2O15020 2390 aa2.52□□□□□ -2.01
UBR1-208ENST00000569066 ALMS1Q8TCU4 4167 aa2.52□□□□□ -2.01
UBR1-208ENST00000569066 MUC3AQ02505 3323 aa2.52□□□□□ -2.01
UBR1-208ENST00000569066 DMXL2Q8TDJ6 3036 aa2.52□□□□□ -2.01
UBR1-208ENST00000569066 CACNA1BQ00975 2339 aa2.52□□□□□ -2.01
UBR1-208ENST00000569066 PCNX1Q96RV3 2341 aa2.52□□□□□ -2.01
UBR1-208ENST00000569066 SMG1Q96Q15 3661 aaKnown RBP2.52□□□□□ -2.01
UBR1-208ENST00000569066 APC2O95996 2303 aa2.52□□□□□ -2.01
UBR1-208ENST00000569066 KAAG1Q9UBP8 84 aa2.52□□□□□ -2.01
UBR1-208ENST00000569066 IGLV5-48A0A075B6I7 105 aa2.51□□□□□ -2.01
UBR1-208ENST00000569066 Q96NJ1 140 aa2.51□□□□□ -2.01
UBR1-208ENST00000569066 NCOR1O75376 2440 aa2.51□□□□□ -2.01
UBR1-208ENST00000569066 TACC2O95359 2948 aa2.5□□□□□ -2.01
UBR1-208ENST00000569066 TRANK1O15050 2925 aa2.5□□□□□ -2.01
UBR1-208ENST00000569066 ATMQ13315 3056 aa2.5□□□□□ -2.01
UBR1-208ENST00000569066 DEFB131BA0A096LNP1 70 aa2.5□□□□□ -2.01
UBR1-208ENST00000569066 TPRP12270 2363 aaKnown RBP2.5□□□□□ -2.01
UBR1-208ENST00000569066 SPTA1P02549 2419 aa2.5□□□□□ -2.01
UBR1-208ENST00000569066 KRTAP12-3P60328 96 aa2.49□□□□□ -2.01
UBR1-208ENST00000569066 AKAP6Q13023 2319 aa2.49□□□□□ -2.01
UBR1-208ENST00000569066 C2CD3Q4AC94 2353 aa2.49□□□□□ -2.01
UBR1-208ENST00000569066 DMXL1Q9Y485 3027 aa2.49□□□□□ -2.01
UBR1-208ENST00000569066 CELSR2Q9HCU4 2923 aa2.48□□□□□ -2.01
UBR1-208ENST00000569066 NBDYA0A0U1RRE5 68 aa2.48□□□□□ -2.01
UBR1-208ENST00000569066 RP1L1Q8IWN7 2480 aaPredicted RBP2.48□□□□□ -2.01
UBR1-208ENST00000569066 RPL37AP61513 92 aaKnown RBP2.48□□□□□ -2.01
UBR1-208ENST00000569066 COX17Q14061 63 aa2.48□□□□□ -2.01
UBR1-208ENST00000569066 SSBP3-AS1Q7Z2R9 100 aa2.47□□□□□ -2.01
UBR1-208ENST00000569066 FBN1P35555 2871 aaKnown RBP2.47□□□□□ -2.01
UBR1-208ENST00000569066 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
UBR1-208ENST00000569066 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
UBR1-208ENST00000569066 CCL19Q99731 98 aa2.47□□□□□ -2.01
UBR1-208ENST00000569066 ITPR1Q14643 2758 aa2.46□□□□□ -2.02
UBR1-208ENST00000569066 FN1P02751 2386 aaKnown RBP2.46□□□□□ -2.02
UBR1-208ENST00000569066 CHD9Q3L8U1 2897 aa2.46□□□□□ -2.02
UBR1-208ENST00000569066 HTN1P15515 57 aa2.46□□□□□ -2.02
UBR1-208ENST00000569066 TPRXLQ17RH7 258 aa2.46□□□□□ -2.02
UBR1-208ENST00000569066 SPINK13Q1W4C9 94 aa2.46□□□□□ -2.02
UBR1-208ENST00000569066 KRTAP4-3Q9BYR4 195 aa2.46□□□□□ -2.02
UBR1-208ENST00000569066 UBR5O95071 2799 aaPredicted RBP2.46□□□□□ -2.02
UBR1-208ENST00000569066 DEFB105AQ8NG35 78 aa2.45□□□□□ -2.02
UBR1-208ENST00000569066 ANGP03950 147 aaKnown RBP2.45□□□□□ -2.02
UBR1-208ENST00000569066 KRTAP12-1P59990 96 aa2.45□□□□□ -2.02
UBR1-208ENST00000569066 KLK9Q2XQG4 91 aa2.44□□□□□ -2.02
UBR1-208ENST00000569066 RIF1Q5UIP0 2472 aaKnown RBP2.44□□□□□ -2.02
UBR1-208ENST00000569066 MAP1BP46821 2468 aaKnown RBP2.44□□□□□ -2.02
UBR1-208ENST00000569066 AKAP13Q12802 2813 aa2.44□□□□□ -2.02
UBR1-208ENST00000569066 SPTY2D1-AS1A0A0U1RR47 76 aa2.43□□□□□ -2.02
UBR1-208ENST00000569066 MINOS1Q5TGZ0 78 aa2.43□□□□□ -2.02
UBR1-208ENST00000569066 PRO2289Q9P1D8 64 aa2.43□□□□□ -2.02
UBR1-208ENST00000569066 Q9Y3F1 56 aa2.43□□□□□ -2.02
UBR1-208ENST00000569066 NF1P21359 2839 aa2.43□□□□□ -2.02
UBR1-208ENST00000569066 ACYP2P14621 99 aa2.43□□□□□ -2.02
UBR1-208ENST00000569066 C6orf48Q9UBA6 75 aa2.43□□□□□ -2.02
UBR1-208ENST00000569066 ADGRG4Q8IZF6 3080 aa2.42□□□□□ -2.02
UBR1-208ENST00000569066 LRBAP50851 2863 aa2.42□□□□□ -2.02
UBR1-208ENST00000569066 CREBBPQ92793 2442 aa2.42□□□□□ -2.02
UBR1-208ENST00000569066 PRRC2CQ9Y520 2896 aaKnown RBP2.42□□□□□ -2.02
UBR1-208ENST00000569066 ROS1P08922 2347 aa2.42□□□□□ -2.02
UBR1-208ENST00000569066 G3V318 75 aa2.42□□□□□ -2.02
UBR1-208ENST00000569066 Q6ZRX8 168 aa2.42□□□□□ -2.02
UBR1-208ENST00000569066 RHPN1-AS1Q9BWJ2 59 aa2.42□□□□□ -2.02
UBR1-208ENST00000569066 EP300Q09472 2414 aaPredicted RBP2.41□□□□□ -2.02
UBR1-208ENST00000569066 MMP24-AS1A0A0U1RRL7 71 aa2.41□□□□□ -2.02
UBR1-208ENST00000569066 H0YAA0 97 aa2.41□□□□□ -2.02
UBR1-208ENST00000569066 CLPSL2Q6UWE3 100 aa2.41□□□□□ -2.02
UBR1-208ENST00000569066 UNQ6190/PRO20217Q6UXQ8 127 aa2.41□□□□□ -2.02
UBR1-208ENST00000569066 SPACA4Q8TDM5 124 aa2.4□□□□□ -2.02
UBR1-208ENST00000569066 CELSR1Q9NYQ6 3014 aa2.4□□□□□ -2.02
UBR1-208ENST00000569066 NAV2Q8IVL1 2488 aa2.4□□□□□ -2.02
UBR1-208ENST00000569066 SPTBN4Q9H254 2564 aa2.4□□□□□ -2.03
UBR1-208ENST00000569066 KMT2BQ9UMN6 2715 aaPredicted RBP2.4□□□□□ -2.03
UBR1-208ENST00000569066 SVEP1Q4LDE5 3571 aa2.4□□□□□ -2.03
UBR1-208ENST00000569066 DEFB133Q30KQ1 61 aa2.39□□□□□ -2.03
UBR1-208ENST00000569066 MAP1AP78559 2803 aaPredicted RBP2.39□□□□□ -2.03
UBR1-208ENST00000569066 EYSQ5T1H1 3165 aa2.39□□□□□ -2.03
UBR1-208ENST00000569066 TENM2Q9NT68 2774 aa2.39□□□□□ -2.03
UBR1-208ENST00000569066 LYNX1G3V0Z9 82 aa2.39□□□□□ -2.03
UBR1-208ENST00000569066 C5orf56Q8N8D9 126 aa2.39□□□□□ -2.03
UBR1-208ENST00000569066 TP53AIP1Q9HCN2 124 aa2.39□□□□□ -2.03
UBR1-208ENST00000569066 NBASA2RRP1 2371 aa2.39□□□□□ -2.03
UBR1-208ENST00000569066 K7EIL1 84 aa2.37□□□□□ -2.03
UBR1-208ENST00000569066 DEFB103AP81534 67 aa2.37□□□□□ -2.03
UBR1-208ENST00000569066 LELP1Q5T871 98 aa2.37□□□□□ -2.03
UBR1-208ENST00000569066 Q6ZSA8 131 aa2.37□□□□□ -2.03
UBR1-208ENST00000569066 AKAP9Q99996 3911 aa2.37□□□□□ -2.03
UBR1-208ENST00000569066 SRRM2Q9UQ35 2752 aaKnown RBP2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms