RNA–Protein interactions for RNA: ENST00000568744.1

CYLD-213, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-213ENST00000568744 PYY3Q5JQD4 70 aa-1.44□□□□□ -2.64
CYLD-213ENST00000568744 LINC00643Q86TS7 51 aa-1.44□□□□□ -2.64
CYLD-213ENST00000568744 NCOA2Q15596 1464 aa-1.44□□□□□ -2.64
CYLD-213ENST00000568744 TMEM131LA2VDJ0 1609 aa-1.44□□□□□ -2.64
CYLD-213ENST00000568744 WIZO95785 1651 aa-1.45□□□□□ -2.64
CYLD-213ENST00000568744 ACYP1P07311 99 aa-1.45□□□□□ -2.64
CYLD-213ENST00000568744 Q9H521 79 aa-1.45□□□□□ -2.64
CYLD-213ENST00000568744 RABAC1Q9UI14 185 aa-1.45□□□□□ -2.64
CYLD-213ENST00000568744 MAP3K1Q13233 1512 aa-1.45□□□□□ -2.64
CYLD-213ENST00000568744 DNAH3Q8TD57 4116 aa-1.46□□□□□ -2.64
CYLD-213ENST00000568744 PRLHP81277 87 aa-1.46□□□□□ -2.64
CYLD-213ENST00000568744 DEFA5Q01523 94 aa-1.46□□□□□ -2.64
CYLD-213ENST00000568744 S100A16Q96FQ6 103 aaKnown RBP-1.46□□□□□ -2.64
CYLD-213ENST00000568744 MGAM2Q2M2H8 2515 aa-1.46□□□□□ -2.64
CYLD-213ENST00000568744 DEPDC5O75140 1603 aa-1.47□□□□□ -2.64
CYLD-213ENST00000568744 DSPP15924 2871 aaKnown RBP-1.47□□□□□ -2.64
CYLD-213ENST00000568744 LRRK2Q5S007 2527 aa-1.47□□□□□ -2.64
CYLD-213ENST00000568744 H0YAA0 97 aa-1.47□□□□□ -2.64
CYLD-213ENST00000568744 K7EP34 96 aa-1.47□□□□□ -2.64
CYLD-213ENST00000568744 S4R3F8 94 aa-1.47□□□□□ -2.64
CYLD-213ENST00000568744 URB2Q14146 1524 aaKnown RBP-1.47□□□□□ -2.64
CYLD-213ENST00000568744 ANK3Q12955 4377 aaKnown RBP-1.48□□□□□ -2.65
CYLD-213ENST00000568744 ZNF831Q5JPB2 1677 aa-1.48□□□□□ -2.65
CYLD-213ENST00000568744 LCE6AA0A183 80 aa-1.49□□□□□ -2.65
CYLD-213ENST00000568744 IFI27P40305 119 aaPredicted RBP-1.49□□□□□ -2.65
CYLD-213ENST00000568744 CCNB3Q8WWL7 1395 aa-1.49□□□□□ -2.65
CYLD-213ENST00000568744 MAGI3Q5TCQ9 1506 aa-1.5□□□□□ -2.65
CYLD-213ENST00000568744 UTP20O75691 2785 aaKnown RBP-1.5□□□□□ -2.65
CYLD-213ENST00000568744 IFI6P09912 130 aa-1.51□□□□□ -2.65
CYLD-213ENST00000568744 ABCC3O15438 1527 aa-1.51□□□□□ -2.65
CYLD-213ENST00000568744 FAM186AA6NE01 2351 aa-1.51□□□□□ -2.65
CYLD-213ENST00000568744 UMAD1C9J7I0 102 aa-1.52□□□□□ -2.65
CYLD-213ENST00000568744 V9GYS6 101 aa-1.52□□□□□ -2.65
CYLD-213ENST00000568744 KALRNO60229 2985 aa-1.52□□□□□ -2.65
CYLD-213ENST00000568744 DIP2BQ9P265 1576 aa-1.52□□□□□ -2.65
CYLD-213ENST00000568744 LYNX1G3V0Z9 82 aa-1.53□□□□□ -2.65
CYLD-213ENST00000568744 KIF14Q15058 1648 aa-1.54□□□□□ -2.66
CYLD-213ENST00000568744 DEFB130BP0DP73 79 aa-1.54□□□□□ -2.66
CYLD-213ENST00000568744 DEFB130AP0DP74 79 aa-1.54□□□□□ -2.66
CYLD-213ENST00000568744 IAPPP10997 89 aa-1.54□□□□□ -2.66
CYLD-213ENST00000568744 DEFB110Q30KQ9 67 aa-1.54□□□□□ -2.66
CYLD-213ENST00000568744 ARFGEF2Q9Y6D5 1785 aa-1.54□□□□□ -2.66
CYLD-213ENST00000568744 CEP290O15078 2479 aa-1.55□□□□□ -2.66
CYLD-213ENST00000568744 VPS13BQ7Z7G8 4022 aa-1.55□□□□□ -2.66
CYLD-213ENST00000568744 APOBP04114 4563 aaKnown RBP-1.55□□□□□ -2.66
CYLD-213ENST00000568744 PVALEFA0A1B0GWK0 134 aa-1.55□□□□□ -2.66
CYLD-213ENST00000568744 PKD1L2Q7Z442 2459 aa-1.55□□□□□ -2.66
CYLD-213ENST00000568744 RYR3Q15413 4870 aa-1.55□□□□□ -2.66
CYLD-213ENST00000568744 MAP3K4Q9Y6R4 1608 aa-1.55□□□□□ -2.66
CYLD-213ENST00000568744 CCDC168Q8NDH2 2452 aa-1.56□□□□□ -2.66
CYLD-213ENST00000568744 CCDC88BA6NC98 1476 aa-1.56□□□□□ -2.66
CYLD-213ENST00000568744 DNAH11Q96DT5 4516 aa-1.56□□□□□ -2.66
CYLD-213ENST00000568744 NDUFA4O00483 81 aa-1.56□□□□□ -2.66
CYLD-213ENST00000568744 NBEAQ8NFP9 2946 aa-1.56□□□□□ -2.66
CYLD-213ENST00000568744 PIK3C2BO00750 1634 aa-1.56□□□□□ -2.66
CYLD-213ENST00000568744 HYDINQ4G0P3 5121 aa-1.56□□□□□ -2.66
CYLD-213ENST00000568744 DEFB106AQ8N104 65 aa-1.57□□□□□ -2.66
CYLD-213ENST00000568744 DDX60LQ5H9U9 1706 aaKnown RBP-1.57□□□□□ -2.66
CYLD-213ENST00000568744 WDR87Q6ZQQ6 2873 aa-1.58□□□□□ -2.66
CYLD-213ENST00000568744 RYR1P21817 5038 aa-1.58□□□□□ -2.66
CYLD-213ENST00000568744 EPPK1P58107 5090 aaKnown RBP-1.59□□□□□ -2.66
CYLD-213ENST00000568744 KANTRA0A1W2PQU2 76 aa-1.6□□□□□ -2.67
CYLD-213ENST00000568744 ACACBO00763 2458 aa-1.6□□□□□ -2.67
CYLD-213ENST00000568744 TTC37Q6PGP7 1564 aa-1.6□□□□□ -2.67
CYLD-213ENST00000568744 NREPQ16612 68 aa-1.61□□□□□ -2.67
CYLD-213ENST00000568744 NBEAL2Q6ZNJ1 2754 aa-1.61□□□□□ -2.67
CYLD-213ENST00000568744 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.61□□□□□ -2.67
CYLD-213ENST00000568744 PLCH1Q4KWH8 1693 aa-1.62□□□□□ -2.67
CYLD-213ENST00000568744 PPLO60437 1756 aa-1.62□□□□□ -2.67
CYLD-213ENST00000568744 ATP5EP2Q5VTU8 51 aa-1.63□□□□□ -2.67
CYLD-213ENST00000568744 A0A087WXM4 84 aa-1.66□□□□□ -2.68
CYLD-213ENST00000568744 MT1HP80294 61 aa-1.66□□□□□ -2.68
CYLD-213ENST00000568744 TDRG1Q3Y452 100 aa-1.66□□□□□ -2.68
CYLD-213ENST00000568744 UACAQ9BZF9 1416 aa-1.66□□□□□ -2.68
CYLD-213ENST00000568744 THOC2Q8NI27 1593 aaKnown RBP-1.67□□□□□ -2.68
CYLD-213ENST00000568744 DEFB131BA0A096LNP1 70 aa-1.67□□□□□ -2.68
CYLD-213ENST00000568744 ITSN1Q15811 1721 aa-1.67□□□□□ -2.68
CYLD-213ENST00000568744 KIAA1109Q2LD37 5005 aa-1.67□□□□□ -2.68
CYLD-213ENST00000568744 TRIOO75962 3097 aa-1.68□□□□□ -2.68
CYLD-213ENST00000568744 CFAP43Q8NDM7 1665 aa-1.68□□□□□ -2.68
CYLD-213ENST00000568744 MRPL33O75394 65 aaKnown RBP-1.69□□□□□ -2.68
CYLD-213ENST00000568744 DNAH2Q9P225 4427 aa-1.69□□□□□ -2.68
CYLD-213ENST00000568744 RICTORQ6R327 1708 aa-1.69□□□□□ -2.68
CYLD-213ENST00000568744 LAMA2P24043 3122 aaKnown RBP-1.69□□□□□ -2.68
CYLD-213ENST00000568744 BIRC6Q9NR09 4857 aa-1.7□□□□□ -2.68
CYLD-213ENST00000568744 ANKRD36CQ5JPF3 1778 aa-1.7□□□□□ -2.68
CYLD-213ENST00000568744 A0A0C4DFX4 3053 aa-1.71□□□□□ -2.68
CYLD-213ENST00000568744 SMIM13P0DJ93 91 aa-1.71□□□□□ -2.68
CYLD-213ENST00000568744 HMGA1P17096 107 aaKnown RBP-1.71□□□□□ -2.68
CYLD-213ENST00000568744 DEFB1P60022 68 aa-1.71□□□□□ -2.68
CYLD-213ENST00000568744 TEX15Q9BXT5 2789 aa-1.71□□□□□ -2.68
CYLD-213ENST00000568744 DNAH1Q9P2D7 4330 aa-1.72□□□□□ -2.68
CYLD-213ENST00000568744 KRTAP19-5Q3LI72 72 aa-1.73□□□□□ -2.69
CYLD-213ENST00000568744 KIAA0586Q9BVV6 1533 aa-1.73□□□□□ -2.69
CYLD-213ENST00000568744 RANBP2P49792 3224 aaKnown RBP-1.74□□□□□ -2.69
CYLD-213ENST00000568744 HFM1A2PYH4 1435 aa-1.74□□□□□ -2.69
CYLD-213ENST00000568744 LAMA3Q16787 3333 aa-1.74□□□□□ -2.69
CYLD-213ENST00000568744 DEFB121Q5J5C9 76 aa-1.74□□□□□ -2.69
CYLD-213ENST00000568744 ST20Q9HBF5 79 aa-1.74□□□□□ -2.69
CYLD-213ENST00000568744 ZC3H13Q5T200 1668 aaKnown RBP-1.74□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms