RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 LINC00528Q8N1L1 170 aa7.74□□□□□ -1.17
TMEM170A-205ENST00000568559 RPS28P62857 69 aaKnown RBP7.74□□□□□ -1.17
TMEM170A-205ENST00000568559 Q6ZR54 194 aa7.73□□□□□ -1.17
TMEM170A-205ENST00000568559 BCE1O60756 84 aa7.73□□□□□ -1.17
TMEM170A-205ENST00000568559 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.72□□□□□ -1.17
TMEM170A-205ENST00000568559 Q6ZVQ6 151 aa7.72□□□□□ -1.17
TMEM170A-205ENST00000568559 BRK1Q8WUW1 75 aa7.72□□□□□ -1.17
TMEM170A-205ENST00000568559 OXTP01178 125 aa7.71□□□□□ -1.17
TMEM170A-205ENST00000568559 LINC00336Q6ZUF6 198 aa7.71□□□□□ -1.17
TMEM170A-205ENST00000568559 Q6JHZ5 121 aa7.71□□□□□ -1.18
TMEM170A-205ENST00000568559 LINC00208Q96KT6 92 aa7.71□□□□□ -1.18
TMEM170A-205ENST00000568559 IGLV5-37A0A075B6J1 123 aa7.7□□□□□ -1.18
TMEM170A-205ENST00000568559 FAM236DA0A1B0GTK5 79 aa7.7□□□□□ -1.18
TMEM170A-205ENST00000568559 SPINK1P00995 79 aa7.7□□□□□ -1.18
TMEM170A-205ENST00000568559 FAM236CP0DP71 79 aa7.7□□□□□ -1.18
TMEM170A-205ENST00000568559 ERC2-IT1O76042 136 aa7.68□□□□□ -1.18
TMEM170A-205ENST00000568559 CASC2Q6XLA1 102 aa7.68□□□□□ -1.18
TMEM170A-205ENST00000568559 LCE6AA0A183 80 aa7.67□□□□□ -1.18
TMEM170A-205ENST00000568559 Q6ZRN7 208 aaPredicted RBP7.66□□□□□ -1.18
TMEM170A-205ENST00000568559 PSORS1C2Q9UIG4 136 aa7.66□□□□□ -1.18
TMEM170A-205ENST00000568559 PLA2G1BP04054 148 aaKnown RBP7.65□□□□□ -1.18
TMEM170A-205ENST00000568559 Q5XG85 94 aa7.64□□□□□ -1.19
TMEM170A-205ENST00000568559 LINC01600Q96MT4 127 aa7.64□□□□□ -1.19
TMEM170A-205ENST00000568559 IGKV2D-30A0A075B6S6 120 aa7.64□□□□□ -1.19
TMEM170A-205ENST00000568559 IGKV2-30P06310 120 aa7.64□□□□□ -1.19
TMEM170A-205ENST00000568559 KRTAP10-2P60368 255 aa7.63□□□□□ -1.19
TMEM170A-205ENST00000568559 PRO0628Q9UI54 55 aa7.63□□□□□ -1.19
TMEM170A-205ENST00000568559 Q8N377 158 aa7.62□□□□□ -1.19
TMEM170A-205ENST00000568559 ZNF861PO60384 105 aa7.61□□□□□ -1.19
TMEM170A-205ENST00000568559 TYMSOSQ8TAI1 123 aa7.61□□□□□ -1.19
TMEM170A-205ENST00000568559 PANO1I0J062 215 aa7.61□□□□□ -1.19
TMEM170A-205ENST00000568559 HCG22E2RYF7 251 aa7.6□□□□□ -1.19
TMEM170A-205ENST00000568559 FAM229AH3BQW9 127 aa7.59□□□□□ -1.19
TMEM170A-205ENST00000568559 ATP5EP2Q5VTU8 51 aa7.59□□□□□ -1.19
TMEM170A-205ENST00000568559 Q6ZQT0 140 aa7.59□□□□□ -1.19
TMEM170A-205ENST00000568559 SMIM29Q86T20 159 aa7.59□□□□□ -1.19
TMEM170A-205ENST00000568559 V9GYY9 64 aa7.59□□□□□ -1.19
TMEM170A-205ENST00000568559 C1orf195Q5TG92 126 aa7.58□□□□□ -1.2
TMEM170A-205ENST00000568559 PLAC8Q9NZF1 115 aa7.58□□□□□ -1.2
TMEM170A-205ENST00000568559 IGLV7-43P04211 117 aa7.58□□□□□ -1.2
TMEM170A-205ENST00000568559 SERP1Q9Y6X1 66 aa7.57□□□□□ -1.2
TMEM170A-205ENST00000568559 LOC110117498A0A087WWA1 95 aa7.56□□□□□ -1.2
TMEM170A-205ENST00000568559 SPRR1AP35321 89 aa7.56□□□□□ -1.2
TMEM170A-205ENST00000568559 C9orf92A6NGG3 77 aa7.56□□□□□ -1.2
TMEM170A-205ENST00000568559 SEC61GP60059 68 aa7.56□□□□□ -1.2
TMEM170A-205ENST00000568559 KRTAP10-1P60331 282 aa7.56□□□□□ -1.2
TMEM170A-205ENST00000568559 FBN3Q75N90 2809 aa7.55□□□□□ -1.2
TMEM170A-205ENST00000568559 SMIM26A0A096LP01 95 aa7.55□□□□□ -1.2
TMEM170A-205ENST00000568559 Q8NBF4 154 aa7.55□□□□□ -1.2
TMEM170A-205ENST00000568559 SPTSSBQ8NFR3 76 aa7.54□□□□□ -1.2
TMEM170A-205ENST00000568559 SPRR4Q96PI1 79 aa7.51□□□□□ -1.21
TMEM170A-205ENST00000568559 KRTAP7-1Q8IUC3 87 aa7.51□□□□□ -1.21
TMEM170A-205ENST00000568559 K7EQZ3 153 aa7.51□□□□□ -1.21
TMEM170A-205ENST00000568559 IGFL1Q6UW32 110 aa7.51□□□□□ -1.21
TMEM170A-205ENST00000568559 H0Y9P7 68 aa7.5□□□□□ -1.21
TMEM170A-205ENST00000568559 J3QL48 77 aa7.5□□□□□ -1.21
TMEM170A-205ENST00000568559 TRBV7-4A0A0J9YYF1 115 aa7.49□□□□□ -1.21
TMEM170A-205ENST00000568559 H7BZZ5 65 aa7.49□□□□□ -1.21
TMEM170A-205ENST00000568559 TRAV7A0A075B6U4 112 aa7.49□□□□□ -1.21
TMEM170A-205ENST00000568559 IGLV5-48A0A075B6I7 105 aa7.48□□□□□ -1.21
TMEM170A-205ENST00000568559 Q96NJ1 140 aa7.47□□□□□ -1.21
TMEM170A-205ENST00000568559 DSCR10P59022 87 aa7.46□□□□□ -1.22
TMEM170A-205ENST00000568559 KRTAP4-16G5E9R7 235 aaPredicted RBP7.46□□□□□ -1.22
TMEM170A-205ENST00000568559 KRTAP11-1Q8IUC1 163 aa7.46□□□□□ -1.22
TMEM170A-205ENST00000568559 A0A1B0GW54 56 aa7.45□□□□□ -1.22
TMEM170A-205ENST00000568559 FP248Q71RG6 208 aaPredicted RBP7.45□□□□□ -1.22
TMEM170A-205ENST00000568559 TMEM254Q8TBM7 123 aa7.45□□□□□ -1.22
TMEM170A-205ENST00000568559 hDV103S1A0JD37 113 aa7.45□□□□□ -1.22
TMEM170A-205ENST00000568559 OBSCN-AS1Q96MR7 158 aa7.45□□□□□ -1.22
TMEM170A-205ENST00000568559 MEGF8Q7Z7M0 2845 aa7.45□□□□□ -1.22
TMEM170A-205ENST00000568559 A0A1W2PNM2 257 aa7.43□□□□□ -1.22
TMEM170A-205ENST00000568559 PRR26Q8N8Z3 221 aa7.43□□□□□ -1.22
TMEM170A-205ENST00000568559 C1orf64Q8NEQ6 169 aa7.43□□□□□ -1.22
TMEM170A-205ENST00000568559 PSPHP1O15172 72 aa7.43□□□□□ -1.22
TMEM170A-205ENST00000568559 CXCL6P80162 114 aa7.43□□□□□ -1.22
TMEM170A-205ENST00000568559 HUWE1Q7Z6Z7 4374 aaKnown RBP7.42□□□□□ -1.22
TMEM170A-205ENST00000568559 LIMD2Q9BT23 127 aa7.42□□□□□ -1.22
TMEM170A-205ENST00000568559 COL7A1Q02388 2944 aa7.42□□□□□ -1.22
TMEM170A-205ENST00000568559 SSBP3-AS1Q7Z2R9 100 aa7.41□□□□□ -1.22
TMEM170A-205ENST00000568559 IGLV8-61A0A075B6I0 122 aa7.41□□□□□ -1.22
TMEM170A-205ENST00000568559 LINC00313P59037 77 aa7.38□□□□□ -1.23
TMEM170A-205ENST00000568559 KLKP1Q107X0 134 aa7.36□□□□□ -1.23
TMEM170A-205ENST00000568559 FAM229BQ4G0N7 80 aa7.36□□□□□ -1.23
TMEM170A-205ENST00000568559 LINC00304Q8N9R0 145 aa7.36□□□□□ -1.23
TMEM170A-205ENST00000568559 NDUFC1O43677 76 aa7.35□□□□□ -1.23
TMEM170A-205ENST00000568559 SPRR1BP22528 89 aa7.35□□□□□ -1.23
TMEM170A-205ENST00000568559 A6NED7 52 aa7.34□□□□□ -1.23
TMEM170A-205ENST00000568559 PMAIP1Q13794 54 aa7.33□□□□□ -1.24
TMEM170A-205ENST00000568559 DNAH9Q9NYC9 4486 aa7.31□□□□□ -1.24
TMEM170A-205ENST00000568559 ATP5EP56381 51 aaPredicted RBP7.31□□□□□ -1.24
TMEM170A-205ENST00000568559 C7orf65Q6ZTY9 151 aa7.31□□□□□ -1.24
TMEM170A-205ENST00000568559 PRR15LQ9BU68 103 aa7.31□□□□□ -1.24
TMEM170A-205ENST00000568559 DNHD1Q96M86 4753 aa7.31□□□□□ -1.24
TMEM170A-205ENST00000568559 ANK2Q01484 3957 aa7.3□□□□□ -1.24
TMEM170A-205ENST00000568559 A8MWP4 228 aa7.28□□□□□ -1.24
TMEM170A-205ENST00000568559 SPAG11AQ6PDA7 123 aa7.28□□□□□ -1.24
TMEM170A-205ENST00000568559 TRAV22A0A0B4J277 110 aa7.27□□□□□ -1.25
TMEM170A-205ENST00000568559 Q5VSD8 79 aa7.26□□□□□ -1.25
TMEM170A-205ENST00000568559 KRTAP13-1Q8IUC0 172 aa7.26□□□□□ -1.25
TMEM170A-205ENST00000568559 Q6ZSA8 131 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms