RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 ELOF1P60002 83 aaKnown RBP2.69□□□□□ -1.98
CLK3-219ENST00000567805 SNRPEP62304 92 aaKnown RBP2.69□□□□□ -1.98
CLK3-219ENST00000567805 C6orf99Q4VX62 202 aa2.69□□□□□ -1.98
CLK3-219ENST00000567805 ATOH7Q8N100 152 aa2.69□□□□□ -1.98
CLK3-219ENST00000567805 A0A1B0GWB2 263 aa2.68□□□□□ -1.98
CLK3-219ENST00000567805 PCP2Q8IVA1 136 aa2.68□□□□□ -1.98
CLK3-219ENST00000567805 LAMTOR3Q9UHA4 124 aa2.68□□□□□ -1.98
CLK3-219ENST00000567805 TRAV13-2A0A0B4J235 113 aa2.67□□□□□ -1.98
CLK3-219ENST00000567805 TEX49A0A1B0GTD5 131 aa2.67□□□□□ -1.98
CLK3-219ENST00000567805 A4D1N5 150 aa2.67□□□□□ -1.98
CLK3-219ENST00000567805 A6NDN8 102 aa2.67□□□□□ -1.98
CLK3-219ENST00000567805 S100A2P29034 98 aa2.67□□□□□ -1.98
CLK3-219ENST00000567805 TAL2Q16559 108 aa2.67□□□□□ -1.98
CLK3-219ENST00000567805 ASB16-AS1Q495Z4 193 aa2.67□□□□□ -1.98
CLK3-219ENST00000567805 MUSTN1Q8IVN3 82 aa2.67□□□□□ -1.98
CLK3-219ENST00000567805 LIMD2Q9BT23 127 aa2.67□□□□□ -1.98
CLK3-219ENST00000567805 HSBP1L1C9JCN9 74 aa2.66□□□□□ -1.98
CLK3-219ENST00000567805 SEC61BP60468 96 aaKnown RBP2.66□□□□□ -1.98
CLK3-219ENST00000567805 CD164Q04900 197 aa2.66□□□□□ -1.98
CLK3-219ENST00000567805 HIST3H2BBQ8N257 126 aa2.66□□□□□ -1.98
CLK3-219ENST00000567805 DEFB105AQ8NG35 78 aa2.66□□□□□ -1.98
CLK3-219ENST00000567805 HIST1H2BLQ99880 126 aa2.66□□□□□ -1.98
CLK3-219ENST00000567805 NHP2Q9NX24 153 aaKnown RBP2.66□□□□□ -1.98
CLK3-219ENST00000567805 FAT4Q6V0I7 4981 aa2.66□□□□□ -1.98
CLK3-219ENST00000567805 IGLV5-48A0A075B6I7 105 aa2.65□□□□□ -1.99
CLK3-219ENST00000567805 PCP4L1A6NKN8 68 aa2.65□□□□□ -1.99
CLK3-219ENST00000567805 Q1RN00 199 aa2.65□□□□□ -1.99
CLK3-219ENST00000567805 HRCT1Q6UXD1 115 aa2.65□□□□□ -1.99
CLK3-219ENST00000567805 SMIM11BQ8TCY0 68 aa2.65□□□□□ -1.99
CLK3-219ENST00000567805 PRO1933Q9H354 126 aa2.65□□□□□ -1.99
CLK3-219ENST00000567805 H7C2G1 150 aa2.64□□□□□ -1.99
CLK3-219ENST00000567805 LINC01547P58512 204 aaPredicted RBP2.64□□□□□ -1.99
CLK3-219ENST00000567805 VAMP3Q15836 100 aa2.64□□□□□ -1.99
CLK3-219ENST00000567805 SMIM29Q86T20 159 aa2.64□□□□□ -1.99
CLK3-219ENST00000567805 Q5XG85 94 aa2.63□□□□□ -1.99
CLK3-219ENST00000567805 hADV29S1A0JD25 119 aa2.62□□□□□ -1.99
CLK3-219ENST00000567805 LINC00575Q6W349 94 aa2.62□□□□□ -1.99
CLK3-219ENST00000567805 C14orf144Q96I85 54 aa2.62□□□□□ -1.99
CLK3-219ENST00000567805 HIST1H4GQ99525 98 aa2.62□□□□□ -1.99
CLK3-219ENST00000567805 KRTAP4-1Q9BYQ7 146 aa2.62□□□□□ -1.99
CLK3-219ENST00000567805 C9orf92A6NGG3 77 aa2.61□□□□□ -1.99
CLK3-219ENST00000567805 F8WEM9 126 aa2.61□□□□□ -1.99
CLK3-219ENST00000567805 DLEU1O43261 78 aa2.61□□□□□ -1.99
CLK3-219ENST00000567805 TCL1BO95988 128 aa2.61□□□□□ -1.99
CLK3-219ENST00000567805 COX8AP10176 69 aa2.61□□□□□ -1.99
CLK3-219ENST00000567805 PYY3Q5JQD4 70 aa2.61□□□□□ -1.99
CLK3-219ENST00000567805 BVES-AS1Q5T3Y7 98 aa2.61□□□□□ -1.99
CLK3-219ENST00000567805 C1orf195Q5TG92 126 aa2.61□□□□□ -1.99
CLK3-219ENST00000567805 Q6ZQY7 126 aa2.61□□□□□ -1.99
CLK3-219ENST00000567805 IGLV8-61A0A075B6I0 122 aa2.6□□□□□ -1.99
CLK3-219ENST00000567805 A0A0G2JQZ4 141 aa2.6□□□□□ -1.99
CLK3-219ENST00000567805 UBE2V1Q13404 147 aa2.6□□□□□ -1.99
CLK3-219ENST00000567805 Q6JHZ5 121 aa2.6□□□□□ -1.99
CLK3-219ENST00000567805 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.6□□□□□ -1.99
CLK3-219ENST00000567805 PPDPFLQ8WWR9 84 aa2.6□□□□□ -1.99
CLK3-219ENST00000567805 CLEC2BQ92478 149 aa2.6□□□□□ -1.99
CLK3-219ENST00000567805 CFC1BP0CG36 223 aa2.59□□□□□ -1.99
CLK3-219ENST00000567805 CFC1P0CG37 223 aa2.59□□□□□ -1.99
CLK3-219ENST00000567805 PCOTHQ58A44 107 aa2.59□□□□□ -1.99
CLK3-219ENST00000567805 HIGD1BQ9P298 99 aa2.59□□□□□ -1.99
CLK3-219ENST00000567805 A0A0B4J2C4 111 aa2.58□□□□□ -2
CLK3-219ENST00000567805 TRBV7-7A0A0K0K1E9 115 aa2.58□□□□□ -2
CLK3-219ENST00000567805 TSTD3H0UI37 97 aa2.58□□□□□ -2
CLK3-219ENST00000567805 SNCGO76070 127 aa2.58□□□□□ -2
CLK3-219ENST00000567805 SPATA45Q537H7 98 aa2.58□□□□□ -2
CLK3-219ENST00000567805 OCIAD2Q56VL3 154 aa2.58□□□□□ -2
CLK3-219ENST00000567805 IGFL1Q6UW32 110 aa2.58□□□□□ -2
CLK3-219ENST00000567805 RAB37Q96AX2 223 aa2.58□□□□□ -2
CLK3-219ENST00000567805 VAMP8Q9BV40 100 aa2.58□□□□□ -2
CLK3-219ENST00000567805 PAM16Q9Y3D7 125 aa2.58□□□□□ -2
CLK3-219ENST00000567805 H0YGX0 51 aa2.57□□□□□ -2
CLK3-219ENST00000567805 RPL37P61927 97 aaKnown RBP2.57□□□□□ -2
CLK3-219ENST00000567805 C2orf91Q6ZV80 131 aa2.57□□□□□ -2
CLK3-219ENST00000567805 SNHG12Q9BXW3 62 aa2.57□□□□□ -2
CLK3-219ENST00000567805 A0A1B0GV90 55 aa2.56□□□□□ -2
CLK3-219ENST00000567805 KRTAP19-2Q3LHN2 52 aa2.56□□□□□ -2
CLK3-219ENST00000567805 CEND1Q8N111 149 aa2.56□□□□□ -2
CLK3-219ENST00000567805 FLGP20930 4061 aaPredicted RBP2.55□□□□□ -2
CLK3-219ENST00000567805 A0A1B0GX51 115 aa2.55□□□□□ -2
CLK3-219ENST00000567805 H3BUT2 72 aa2.55□□□□□ -2
CLK3-219ENST00000567805 LST1O00453 97 aa2.55□□□□□ -2
CLK3-219ENST00000567805 NDUFV3P56181 108 aaKnown RBP2.55□□□□□ -2
CLK3-219ENST00000567805 Q6Q795 121 aa2.55□□□□□ -2
CLK3-219ENST00000567805 TEN1Q86WV5 123 aa2.55□□□□□ -2
CLK3-219ENST00000567805 FAM218AQ96MZ4 157 aa2.55□□□□□ -2
CLK3-219ENST00000567805 SS18L2Q9UHA2 77 aa2.55□□□□□ -2
CLK3-219ENST00000567805 PRO1854Q9UHT4 67 aa2.55□□□□□ -2
CLK3-219ENST00000567805 M0R143 59 aa2.54□□□□□ -2
CLK3-219ENST00000567805 FXYD2P54710 66 aa2.54□□□□□ -2
CLK3-219ENST00000567805 Q75L30 129 aa2.54□□□□□ -2
CLK3-219ENST00000567805 OBSCN-AS1Q96MR7 158 aa2.54□□□□□ -2
CLK3-219ENST00000567805 H3BMG7 143 aa2.53□□□□□ -2
CLK3-219ENST00000567805 FABP2P12104 132 aa2.53□□□□□ -2
CLK3-219ENST00000567805 MT1HP80294 61 aa2.53□□□□□ -2
CLK3-219ENST00000567805 A0A087WSZ3 146 aa2.52□□□□□ -2.01
CLK3-219ENST00000567805 H3BQ85 93 aa2.52□□□□□ -2.01
CLK3-219ENST00000567805 DNAL4O96015 105 aa2.52□□□□□ -2.01
CLK3-219ENST00000567805 HSD52Q0P140 79 aa2.52□□□□□ -2.01
CLK3-219ENST00000567805 ATP11AUNQ6ZP68 121 aa2.52□□□□□ -2.01
CLK3-219ENST00000567805 TMEM256-PLSCR3K7ERE1 68 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms