RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 DPH3Q96FX2 82 aa5.49□□□□□ -1.53
LSM3P5-201ENST00000566307 DSCR8Q96T75 97 aa5.49□□□□□ -1.53
LSM3P5-201ENST00000566307 ERC2-IT1O76042 136 aa5.48□□□□□ -1.53
LSM3P5-201ENST00000566307 KRTAP10-2P60368 255 aa5.48□□□□□ -1.53
LSM3P5-201ENST00000566307 LINC00643Q86TS7 51 aa5.48□□□□□ -1.53
LSM3P5-201ENST00000566307 IGLV8-61A0A075B6I0 122 aa5.47□□□□□ -1.53
LSM3P5-201ENST00000566307 SCGB1A1P11684 91 aa5.47□□□□□ -1.53
LSM3P5-201ENST00000566307 UBE2AP49459 152 aa5.47□□□□□ -1.53
LSM3P5-201ENST00000566307 XGP55808 180 aa5.47□□□□□ -1.53
LSM3P5-201ENST00000566307 PRLHP81277 87 aa5.47□□□□□ -1.53
LSM3P5-201ENST00000566307 Q6Q795 121 aa5.46□□□□□ -1.54
LSM3P5-201ENST00000566307 SMIM29Q86T20 159 aa5.46□□□□□ -1.54
LSM3P5-201ENST00000566307 ST20-AS1Q8NBB2 130 aa5.46□□□□□ -1.54
LSM3P5-201ENST00000566307 KRTAP4-2Q9BYR5 136 aa5.46□□□□□ -1.54
LSM3P5-201ENST00000566307 KRTAP23-1A1A580 65 aa5.45□□□□□ -1.54
LSM3P5-201ENST00000566307 Q6JHZ5 121 aa5.45□□□□□ -1.54
LSM3P5-201ENST00000566307 HIGD2AQ9BW72 106 aa5.45□□□□□ -1.54
LSM3P5-201ENST00000566307 IMUPQ9GZP8 106 aa5.45□□□□□ -1.54
LSM3P5-201ENST00000566307 TRBV7-7A0A0K0K1E9 115 aa5.44□□□□□ -1.54
LSM3P5-201ENST00000566307 MT-ATP8P03928 68 aa5.44□□□□□ -1.54
LSM3P5-201ENST00000566307 LINC00846Q9NV44 126 aa5.44□□□□□ -1.54
LSM3P5-201ENST00000566307 PSORS1C2Q9UIG4 136 aa5.44□□□□□ -1.54
LSM3P5-201ENST00000566307 FUSP35637 526 aaKnown RBP eCLIP5.43□□□□□ -1.54
LSM3P5-201ENST00000566307 KRTAP10-1P60331 282 aa5.43□□□□□ -1.54
LSM3P5-201ENST00000566307 ATP5EP2Q5VTU8 51 aa5.43□□□□□ -1.54
LSM3P5-201ENST00000566307 DEFB105AQ8NG35 78 aa5.43□□□□□ -1.54
LSM3P5-201ENST00000566307 CIRBP-AS1Q8TBR5 109 aa5.43□□□□□ -1.54
LSM3P5-201ENST00000566307 ZNF706Q9Y5V0 76 aaPredicted RBP5.43□□□□□ -1.54
LSM3P5-201ENST00000566307 DNAH8Q96JB1 4490 aa5.42□□□□□ -1.54
LSM3P5-201ENST00000566307 DNAH11Q96DT5 4516 aa5.42□□□□□ -1.54
LSM3P5-201ENST00000566307 HECTD4Q9Y4D8 3996 aa5.42□□□□□ -1.54
LSM3P5-201ENST00000566307 F8WEM9 126 aa5.42□□□□□ -1.54
LSM3P5-201ENST00000566307 ZNF861PO60384 105 aa5.42□□□□□ -1.54
LSM3P5-201ENST00000566307 RPL37AP61513 92 aaKnown RBP5.42□□□□□ -1.54
LSM3P5-201ENST00000566307 LINC00483Q53H64 154 aa5.42□□□□□ -1.54
LSM3P5-201ENST00000566307 SACSQ9NZJ4 4579 aa5.42□□□□□ -1.54
LSM3P5-201ENST00000566307 FRAS1Q86XX4 4008 aa5.41□□□□□ -1.54
LSM3P5-201ENST00000566307 HYDINQ4G0P3 5121 aa5.41□□□□□ -1.54
LSM3P5-201ENST00000566307 A0A1B0GVY2 172 aa5.41□□□□□ -1.54
LSM3P5-201ENST00000566307 C1orf137Q5JT78 98 aa5.41□□□□□ -1.54
LSM3P5-201ENST00000566307 SCXQ7RTU7 201 aa5.41□□□□□ -1.54
LSM3P5-201ENST00000566307 SPRR4Q96PI1 79 aa5.41□□□□□ -1.54
LSM3P5-201ENST00000566307 UBL5Q9BZL1 73 aa5.41□□□□□ -1.54
LSM3P5-201ENST00000566307 DNAH5Q8TE73 4624 aa5.41□□□□□ -1.54
LSM3P5-201ENST00000566307 A0A1B0GV72 72 aa5.4□□□□□ -1.54
LSM3P5-201ENST00000566307 IGLV7-43P04211 117 aa5.4□□□□□ -1.54
LSM3P5-201ENST00000566307 Q8NBF4 154 aa5.4□□□□□ -1.54
LSM3P5-201ENST00000566307 C3orf22Q8N5N4 141 aa5.39□□□□□ -1.55
LSM3P5-201ENST00000566307 FAT2Q9NYQ8 4349 aa5.39□□□□□ -1.55
LSM3P5-201ENST00000566307 A0A1W2PNM2 257 aa5.38□□□□□ -1.55
LSM3P5-201ENST00000566307 CRYGAP11844 174 aa5.38□□□□□ -1.55
LSM3P5-201ENST00000566307 RYR2Q92736 4967 aa5.37□□□□□ -1.55
LSM3P5-201ENST00000566307 CXCL6P80162 114 aa5.37□□□□□ -1.55
LSM3P5-201ENST00000566307 IGFL1Q6UW32 110 aa5.37□□□□□ -1.55
LSM3P5-201ENST00000566307 Q6ZVQ6 151 aa5.37□□□□□ -1.55
LSM3P5-201ENST00000566307 KRTAP4-11Q9BYQ6 195 aa5.36□□□□□ -1.55
LSM3P5-201ENST00000566307 KRTAP9-7A8MTY7 169 aa5.35□□□□□ -1.55
LSM3P5-201ENST00000566307 NREPQ16612 68 aa5.33□□□□□ -1.56
LSM3P5-201ENST00000566307 PKD1P98161 4303 aa5.33□□□□□ -1.56
LSM3P5-201ENST00000566307 FAM229BQ4G0N7 80 aa5.32□□□□□ -1.56
LSM3P5-201ENST00000566307 IGKV3D-7A0A0C4DH55 119 aa5.31□□□□□ -1.56
LSM3P5-201ENST00000566307 HIST1H4AP62805 103 aaKnown RBP5.31□□□□□ -1.56
LSM3P5-201ENST00000566307 HAMPP81172 84 aa5.29□□□□□ -1.56
LSM3P5-201ENST00000566307 CD164Q04900 197 aa5.29□□□□□ -1.56
LSM3P5-201ENST00000566307 SSBP3-AS1Q7Z2R9 100 aa5.29□□□□□ -1.56
LSM3P5-201ENST00000566307 DYNC1H1Q14204 4646 aaKnown RBP5.28□□□□□ -1.56
LSM3P5-201ENST00000566307 BPY2O14599 106 aa5.28□□□□□ -1.56
LSM3P5-201ENST00000566307 A0A087WSZ3 146 aa5.27□□□□□ -1.57
LSM3P5-201ENST00000566307 KRTAP19-4Q3LI73 84 aa5.27□□□□□ -1.57
LSM3P5-201ENST00000566307 C9orf153Q5TBE3 101 aa5.27□□□□□ -1.57
LSM3P5-201ENST00000566307 SPINK6Q6UWN8 80 aa5.27□□□□□ -1.57
LSM3P5-201ENST00000566307 KRTAP4-5Q9BYR2 181 aa5.27□□□□□ -1.57
LSM3P5-201ENST00000566307 LRP1BQ9NZR2 4599 aa5.27□□□□□ -1.57
LSM3P5-201ENST00000566307 FAM236AA0A1B0GUQ0 79 aa5.26□□□□□ -1.57
LSM3P5-201ENST00000566307 FAM236BA0A1B0GV22 79 aa5.26□□□□□ -1.57
LSM3P5-201ENST00000566307 SS18L2Q9UHA2 77 aa5.26□□□□□ -1.57
LSM3P5-201ENST00000566307 IGLV9-49A0A0B4J1Y8 123 aa5.25□□□□□ -1.57
LSM3P5-201ENST00000566307 ATOX1O00244 68 aa5.25□□□□□ -1.57
LSM3P5-201ENST00000566307 KRTAP1-4P0C5Y4 121 aa5.25□□□□□ -1.57
LSM3P5-201ENST00000566307 MOBPQ13875 183 aa5.25□□□□□ -1.57
LSM3P5-201ENST00000566307 LINC00472Q9H8W2 130 aa5.25□□□□□ -1.57
LSM3P5-201ENST00000566307 KMT2CQ8NEZ4 4911 aaKnown RBP5.24□□□□□ -1.57
LSM3P5-201ENST00000566307 A0A0A0MQY5 61 aa5.24□□□□□ -1.57
LSM3P5-201ENST00000566307 A0A0G2JQZ4 141 aa5.24□□□□□ -1.57
LSM3P5-201ENST00000566307 J3KT08 172 aa5.24□□□□□ -1.57
LSM3P5-201ENST00000566307 IGKV4-1P06312 121 aa5.24□□□□□ -1.57
LSM3P5-201ENST00000566307 A0A087WVE0 104 aa5.23□□□□□ -1.57
LSM3P5-201ENST00000566307 DSCR10P59022 87 aa5.23□□□□□ -1.57
LSM3P5-201ENST00000566307 KRTAP10-4P60372 401 aaPredicted RBP5.23□□□□□ -1.57
LSM3P5-201ENST00000566307 ASB16-AS1Q495Z4 193 aa5.23□□□□□ -1.57
LSM3P5-201ENST00000566307 Q5XG85 94 aa5.23□□□□□ -1.57
LSM3P5-201ENST00000566307 ANAPC13Q9BS18 74 aa5.23□□□□□ -1.57
LSM3P5-201ENST00000566307 CDK2AP2O75956 126 aa5.22□□□□□ -1.57
LSM3P5-201ENST00000566307 LCE5AQ5TCM9 118 aa5.22□□□□□ -1.57
LSM3P5-201ENST00000566307 SMIM20Q8N5G0 67 aa5.22□□□□□ -1.57
LSM3P5-201ENST00000566307 ANAPC11Q9NYG5 84 aa5.22□□□□□ -1.57
LSM3P5-201ENST00000566307 KRTAP13-2Q52LG2 175 aa5.2□□□□□ -1.58
LSM3P5-201ENST00000566307 A0A087X002 238 aa5.19□□□□□ -1.58
LSM3P5-201ENST00000566307 A8MWP4 228 aa5.19□□□□□ -1.58
LSM3P5-201ENST00000566307 Q96NJ1 140 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms