RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 SPRR4Q96PI1 79 aa8.89□□□□□ -0.99
SPG7-213ENST00000566221 J3QL48 77 aa8.88□□□□□ -0.99
SPG7-213ENST00000566221 KRTAP1-4P0C5Y4 121 aa8.87□□□□□ -0.99
SPG7-213ENST00000566221 Q6ZQY7 126 aa8.87□□□□□ -0.99
SPG7-213ENST00000566221 ST20-AS1Q8NBB2 130 aa8.86□□□□□ -0.99
SPG7-213ENST00000566221 LINC00483Q53H64 154 aa8.85□□□□□ -0.99
SPG7-213ENST00000566221 SMCPP49901 116 aaPredicted RBP8.84□□□□□ -0.99
SPG7-213ENST00000566221 FAM229BQ4G0N7 80 aa8.84□□□□□ -0.99
SPG7-213ENST00000566221 GAGE2AQ6NT46 116 aa8.84□□□□□ -0.99
SPG7-213ENST00000566221 IGLV5-48A0A075B6I7 105 aa8.83□□□□□ -1
SPG7-213ENST00000566221 TEX49A0A1B0GTD5 131 aa8.82□□□□□ -1
SPG7-213ENST00000566221 SPRR1BP22528 89 aa8.82□□□□□ -1
SPG7-213ENST00000566221 LINC01547P58512 204 aaPredicted RBP8.81□□□□□ -1
SPG7-213ENST00000566221 MTURNQ8N3F0 131 aa8.81□□□□□ -1
SPG7-213ENST00000566221 DEFB105AQ8NG35 78 aa8.81□□□□□ -1
SPG7-213ENST00000566221 ANAPC11Q9NYG5 84 aa8.81□□□□□ -1
SPG7-213ENST00000566221 JMJD7-PLA2G4BH0Y9G9 81 aa8.8□□□□□ -1
SPG7-213ENST00000566221 OXTP01178 125 aa8.8□□□□□ -1
SPG7-213ENST00000566221 CRYGAP11844 174 aa8.8□□□□□ -1
SPG7-213ENST00000566221 TEN1Q86WV5 123 aa8.8□□□□□ -1
SPG7-213ENST00000566221 MYCBP2O75592 4640 aa8.79□□□□□ -1
SPG7-213ENST00000566221 A0A087X002 238 aa8.78□□□□□ -1
SPG7-213ENST00000566221 Q8N377 158 aa8.78□□□□□ -1
SPG7-213ENST00000566221 ETDBQ3ZM63 59 aa8.77□□□□□ -1.01
SPG7-213ENST00000566221 PRR26Q8N8Z3 221 aa8.77□□□□□ -1.01
SPG7-213ENST00000566221 KRTAP29-1A8MX34 341 aaPredicted RBP8.76□□□□□ -1.01
SPG7-213ENST00000566221 NDUFV3P56181 108 aaKnown RBP8.76□□□□□ -1.01
SPG7-213ENST00000566221 C21orf62-AS1Q17RA5 79 aa8.76□□□□□ -1.01
SPG7-213ENST00000566221 OBSCN-AS1Q96MR7 158 aa8.76□□□□□ -1.01
SPG7-213ENST00000566221 LAMTOR3Q9UHA4 124 aa8.76□□□□□ -1.01
SPG7-213ENST00000566221 LRP1Q07954 4544 aaKnown RBP8.75□□□□□ -1.01
SPG7-213ENST00000566221 FAT3Q8TDW7 4589 aa8.75□□□□□ -1.01
SPG7-213ENST00000566221 IGLV9-49A0A0B4J1Y8 123 aa8.74□□□□□ -1.01
SPG7-213ENST00000566221 KRTAP13-2Q52LG2 175 aa8.74□□□□□ -1.01
SPG7-213ENST00000566221 F8WEM9 126 aa8.73□□□□□ -1.01
SPG7-213ENST00000566221 PDE6GP18545 87 aa8.73□□□□□ -1.01
SPG7-213ENST00000566221 SMIM29Q86T20 159 aa8.73□□□□□ -1.01
SPG7-213ENST00000566221 C3orf22Q8N5N4 141 aa8.73□□□□□ -1.01
SPG7-213ENST00000566221 TYMSOSQ8TAI1 123 aa8.73□□□□□ -1.01
SPG7-213ENST00000566221 RBM3P98179 157 aaKnown RBP8.72□□□□□ -1.01
SPG7-213ENST00000566221 C9orf153Q5TBE3 101 aa8.72□□□□□ -1.01
SPG7-213ENST00000566221 Q8NBF4 154 aa8.72□□□□□ -1.01
SPG7-213ENST00000566221 KRTAP10-8P60410 259 aa8.71□□□□□ -1.02
SPG7-213ENST00000566221 MOBPQ13875 183 aa8.71□□□□□ -1.02
SPG7-213ENST00000566221 J3QR89 54 aa8.7□□□□□ -1.02
SPG7-213ENST00000566221 MT1HL1P0DM35 61 aa8.7□□□□□ -1.02
SPG7-213ENST00000566221 DSCR8Q96T75 97 aa8.69□□□□□ -1.02
SPG7-213ENST00000566221 IGLV8-61A0A075B6I0 122 aa8.68□□□□□ -1.02
SPG7-213ENST00000566221 SSBP3-AS1Q7Z2R9 100 aa8.68□□□□□ -1.02
SPG7-213ENST00000566221 LOC110117498A0A087WWA1 95 aa8.67□□□□□ -1.02
SPG7-213ENST00000566221 Q6JHZ5 121 aa8.66□□□□□ -1.02
SPG7-213ENST00000566221 TNXBP22105 4242 aa8.65□□□□□ -1.02
SPG7-213ENST00000566221 K7ERU9 68 aa8.65□□□□□ -1.02
SPG7-213ENST00000566221 TRBV7-4A0A0J9YYF1 115 aa8.64□□□□□ -1.03
SPG7-213ENST00000566221 LINC00304Q8N9R0 145 aa8.64□□□□□ -1.03
SPG7-213ENST00000566221 C14orf132Q9NPU4 83 aa8.64□□□□□ -1.03
SPG7-213ENST00000566221 A0A1B0GW54 56 aa8.62□□□□□ -1.03
SPG7-213ENST00000566221 CCKP06307 115 aa8.62□□□□□ -1.03
SPG7-213ENST00000566221 ACYP1P07311 99 aa8.62□□□□□ -1.03
SPG7-213ENST00000566221 FAM240AA0A1B0GVK7 77 aa8.61□□□□□ -1.03
SPG7-213ENST00000566221 Q6ZQT0 140 aa8.61□□□□□ -1.03
SPG7-213ENST00000566221 SPAG11AQ6PDA7 123 aa8.6□□□□□ -1.03
SPG7-213ENST00000566221 A0A1B0GV72 72 aa8.59□□□□□ -1.03
SPG7-213ENST00000566221 C4orf48Q5BLP8 95 aa8.59□□□□□ -1.03
SPG7-213ENST00000566221 IGFL1Q6UW32 110 aa8.59□□□□□ -1.03
SPG7-213ENST00000566221 HMCN2Q8NDA2 5059 aa8.58□□□□□ -1.04
SPG7-213ENST00000566221 CD164Q04900 197 aa8.57□□□□□ -1.04
SPG7-213ENST00000566221 SPINK1P00995 79 aa8.56□□□□□ -1.04
SPG7-213ENST00000566221 Q6Q795 121 aa8.56□□□□□ -1.04
SPG7-213ENST00000566221 A0A0G2JQZ4 141 aa8.55□□□□□ -1.04
SPG7-213ENST00000566221 RPS29P62273 56 aaKnown RBP8.54□□□□□ -1.04
SPG7-213ENST00000566221 HRCT1Q6UXD1 115 aa8.53□□□□□ -1.04
SPG7-213ENST00000566221 A0A1W2PNM2 257 aa8.51□□□□□ -1.05
SPG7-213ENST00000566221 LIMD2Q9BT23 127 aa8.51□□□□□ -1.05
SPG7-213ENST00000566221 VPS25Q9BRG1 176 aa8.5□□□□□ -1.05
SPG7-213ENST00000566221 TRBV7-7A0A0K0K1E9 115 aa8.49□□□□□ -1.05
SPG7-213ENST00000566221 Q5XG85 94 aa8.47□□□□□ -1.05
SPG7-213ENST00000566221 UBL5Q9BZL1 73 aa8.46□□□□□ -1.06
SPG7-213ENST00000566221 LINC00846Q9NV44 126 aa8.45□□□□□ -1.06
SPG7-213ENST00000566221 SS18L2Q9UHA2 77 aa8.45□□□□□ -1.06
SPG7-213ENST00000566221 A0A087WSZ3 146 aa8.43□□□□□ -1.06
SPG7-213ENST00000566221 NREPQ16612 68 aa8.42□□□□□ -1.06
SPG7-213ENST00000566221 LINC00643Q86TS7 51 aa8.42□□□□□ -1.06
SPG7-213ENST00000566221 CDIP1Q9H305 208 aa8.41□□□□□ -1.06
SPG7-213ENST00000566221 ASB16-AS1Q495Z4 193 aa8.4□□□□□ -1.06
SPG7-213ENST00000566221 RETNLBQ9BQ08 111 aa8.4□□□□□ -1.06
SPG7-213ENST00000566221 ATP5EP2Q5VTU8 51 aa8.39□□□□□ -1.07
SPG7-213ENST00000566221 Q6ZVQ6 151 aa8.39□□□□□ -1.07
SPG7-213ENST00000566221 RNF213Q63HN8 5207 aa8.38□□□□□ -1.07
SPG7-213ENST00000566221 FP248Q71RG6 208 aaPredicted RBP8.36□□□□□ -1.07
SPG7-213ENST00000566221 C1orf195Q5TG92 126 aa8.35□□□□□ -1.07
SPG7-213ENST00000566221 CXCL6P80162 114 aa8.34□□□□□ -1.07
SPG7-213ENST00000566221 PRR4Q16378 134 aa8.34□□□□□ -1.07
SPG7-213ENST00000566221 J3KT08 172 aa8.33□□□□□ -1.08
SPG7-213ENST00000566221 BPY2O14599 106 aa8.32□□□□□ -1.08
SPG7-213ENST00000566221 LINC00472Q9H8W2 130 aa8.32□□□□□ -1.08
SPG7-213ENST00000566221 SIGMAR1Q99720 223 aa8.31□□□□□ -1.08
SPG7-213ENST00000566221 IGLV7-46A0A075B6I9 117 aa8.3□□□□□ -1.08
SPG7-213ENST00000566221 Q96NJ1 140 aa8.3□□□□□ -1.08
SPG7-213ENST00000566221 IMUPQ9GZP8 106 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms