RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 ROMO1P60602 79 aa0.76□□□□□ -2.29
PALB2-203ENST00000565038 SERF2P84101 59 aa0.76□□□□□ -2.29
PALB2-203ENST00000565038 SPANXN1Q5VSR9 72 aa0.76□□□□□ -2.29
PALB2-203ENST00000565038 C5orf38Q86SI9 138 aa0.76□□□□□ -2.29
PALB2-203ENST00000565038 Q86TA4 180 aa0.76□□□□□ -2.29
PALB2-203ENST00000565038 TEN1Q86WV5 123 aa0.76□□□□□ -2.29
PALB2-203ENST00000565038 KCNRGQ8N5I3 272 aa0.76□□□□□ -2.29
PALB2-203ENST00000565038 C5orf17Q8NAS9 161 aa0.76□□□□□ -2.29
PALB2-203ENST00000565038 FAM213BQ8TBF2 198 aa0.76□□□□□ -2.29
PALB2-203ENST00000565038 S100ZQ8WXG8 99 aa0.76□□□□□ -2.29
PALB2-203ENST00000565038 LINC01600Q96MT4 127 aa0.76□□□□□ -2.29
PALB2-203ENST00000565038 TMEM167BQ9NRX6 74 aa0.76□□□□□ -2.29
PALB2-203ENST00000565038 PLAC8Q9NZF1 115 aa0.76□□□□□ -2.29
PALB2-203ENST00000565038 ORMDL1Q9P0S3 153 aa0.76□□□□□ -2.29
PALB2-203ENST00000565038 GNG13Q9P2W3 67 aa0.76□□□□□ -2.29
PALB2-203ENST00000565038 LOC110117498A0A087WWA1 95 aa0.75□□□□□ -2.29
PALB2-203ENST00000565038 A0A087WWC5 75 aa0.75□□□□□ -2.29
PALB2-203ENST00000565038 BORCS7-ASMTA0A0B4J1R7 106 aa0.75□□□□□ -2.29
PALB2-203ENST00000565038 PIGBOS1A0A0B4J2F0 54 aa0.75□□□□□ -2.29
PALB2-203ENST00000565038 IGHV1-24A0A0C4DH33 117 aa0.75□□□□□ -2.29
PALB2-203ENST00000565038 LINC00959A0A1B0GUT2 108 aa0.75□□□□□ -2.29
PALB2-203ENST00000565038 ZNF727A8MUV8 499 aa0.75□□□□□ -2.29
PALB2-203ENST00000565038 CCL25O15444 150 aa0.75□□□□□ -2.29
PALB2-203ENST00000565038 HIST1H2BKO60814 126 aa0.75□□□□□ -2.29
PALB2-203ENST00000565038 NCR2O95944 276 aa0.75□□□□□ -2.29
PALB2-203ENST00000565038 HIST1H2BJP06899 126 aa0.75□□□□□ -2.29
PALB2-203ENST00000565038 BCL2P10415 239 aa0.75□□□□□ -2.29
PALB2-203ENST00000565038 POLR2KP53803 58 aaKnown RBP0.75□□□□□ -2.29
PALB2-203ENST00000565038 UBE2G1P62253 170 aa0.75□□□□□ -2.29
PALB2-203ENST00000565038 RPL39P62891 51 aaKnown RBP0.75□□□□□ -2.29
PALB2-203ENST00000565038 CIRBPQ14011 172 aaKnown RBP0.75□□□□□ -2.29
PALB2-203ENST00000565038 ZNF56Q15929 161 aa0.75□□□□□ -2.29
PALB2-203ENST00000565038 IQCJQ1A5X6 159 aa0.75□□□□□ -2.29
PALB2-203ENST00000565038 C9orf116Q5BN46 136 aaPredicted RBP0.75□□□□□ -2.29
PALB2-203ENST00000565038 C9orf62Q8N4C0 152 aa0.75□□□□□ -2.29
PALB2-203ENST00000565038 PSMG3Q9BT73 122 aaPredicted RBP0.75□□□□□ -2.29
PALB2-203ENST00000565038 DPH3P1Q9H4G8 78 aa0.75□□□□□ -2.29
PALB2-203ENST00000565038 NIT2Q9NQR4 276 aa0.75□□□□□ -2.29
PALB2-203ENST00000565038 CDC42SE2Q9NRR3 84 aa0.75□□□□□ -2.29
PALB2-203ENST00000565038 TMEM242Q9NWH2 141 aa0.75□□□□□ -2.29
PALB2-203ENST00000565038 TRBV25-1A0A075B6N4 114 aa0.74□□□□□ -2.29
PALB2-203ENST00000565038 TRAV13-1A0A0B4J241 112 aa0.74□□□□□ -2.29
PALB2-203ENST00000565038 H3BRM9 83 aa0.74□□□□□ -2.29
PALB2-203ENST00000565038 K7EP13 123 aa0.74□□□□□ -2.29
PALB2-203ENST00000565038 INE1O15225 51 aa0.74□□□□□ -2.29
PALB2-203ENST00000565038 FABP2P12104 132 aa0.74□□□□□ -2.29
PALB2-203ENST00000565038 HBBP68871 147 aa0.74□□□□□ -2.29
PALB2-203ENST00000565038 Q0VG73 95 aa0.74□□□□□ -2.29
PALB2-203ENST00000565038 LINC00299Q6ZSB3 139 aa0.74□□□□□ -2.29
PALB2-203ENST00000565038 NUP35Q8NFH5 326 aa0.74□□□□□ -2.29
PALB2-203ENST00000565038 C6orf48Q9UBA6 75 aa0.74□□□□□ -2.29
PALB2-203ENST00000565038 V9GYV3 84 aa0.74□□□□□ -2.29
PALB2-203ENST00000565038 MACF1Q9UPN3 7388 aaKnown RBP0.74□□□□□ -2.29
PALB2-203ENST00000565038 KMT2DO14686 5537 aa0.73□□□□□ -2.29
PALB2-203ENST00000565038 GVQW2A0A096LPI5 108 aaPredicted RBP0.73□□□□□ -2.29
PALB2-203ENST00000565038 IGHV1-58A0A0C4DH39 117 aa0.73□□□□□ -2.29
PALB2-203ENST00000565038 KANTRA0A1W2PQU2 76 aa0.73□□□□□ -2.29
PALB2-203ENST00000565038 hDV103S1A0JD37 113 aa0.73□□□□□ -2.29
PALB2-203ENST00000565038 I3L3M4 83 aa0.73□□□□□ -2.29
PALB2-203ENST00000565038 NCR3O14931 201 aa0.73□□□□□ -2.29
PALB2-203ENST00000565038 PFDN1O60925 122 aa0.73□□□□□ -2.29
PALB2-203ENST00000565038 ADCYAP1P18509 176 aa0.73□□□□□ -2.29
PALB2-203ENST00000565038 GNG4P50150 75 aa0.73□□□□□ -2.29
PALB2-203ENST00000565038 SPINK6Q6UWN8 80 aa0.73□□□□□ -2.29
PALB2-203ENST00000565038 ALKAL2Q6UX46 152 aa0.73□□□□□ -2.29
PALB2-203ENST00000565038 Q6ZUT4 128 aa0.73□□□□□ -2.29
PALB2-203ENST00000565038 PLEKHB2Q96CS7 222 aa0.73□□□□□ -2.29
PALB2-203ENST00000565038 ST20Q9HBF5 79 aa0.73□□□□□ -2.29
PALB2-203ENST00000565038 UBE2D4Q9Y2X8 147 aa0.73□□□□□ -2.29
PALB2-203ENST00000565038 NEBP20929 6669 aa0.72□□□□□ -2.29
PALB2-203ENST00000565038 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.72□□□□□ -2.29
PALB2-203ENST00000565038 TRBV27A0A0K0K1C4 114 aa0.72□□□□□ -2.29
PALB2-203ENST00000565038 LOC107984640A0A0U1RRK4 108 aa0.72□□□□□ -2.29
PALB2-203ENST00000565038 A0A1B0GUT8 65 aa0.72□□□□□ -2.29
PALB2-203ENST00000565038 A0A1B0GV72 72 aa0.72□□□□□ -2.29
PALB2-203ENST00000565038 SMIM27A0A1W2PRY6 76 aa0.72□□□□□ -2.29
PALB2-203ENST00000565038 HIGD1CA8MV81 97 aa0.72□□□□□ -2.29
PALB2-203ENST00000565038 UMAD1C9J7I0 102 aa0.72□□□□□ -2.29
PALB2-203ENST00000565038 D6R8Y8 96 aa0.72□□□□□ -2.29
PALB2-203ENST00000565038 F2Z2F3 143 aa0.72□□□□□ -2.29
PALB2-203ENST00000565038 CKS2P33552 79 aa0.72□□□□□ -2.29
PALB2-203ENST00000565038 SPAG11BQ08648 103 aa0.72□□□□□ -2.29
PALB2-203ENST00000565038 MRPL54Q6P161 138 aaKnown RBP0.72□□□□□ -2.29
PALB2-203ENST00000565038 TSKUQ8WUA8 353 aa0.72□□□□□ -2.29
PALB2-203ENST00000565038 CARD19Q96LW7 228 aa0.72□□□□□ -2.29
PALB2-203ENST00000565038 AP1S3Q96PC3 154 aa0.72□□□□□ -2.29
PALB2-203ENST00000565038 CNFNQ9BYD5 112 aa0.72□□□□□ -2.29
PALB2-203ENST00000565038 TMEM191AQ9H0A3 160 aa0.72□□□□□ -2.29
PALB2-203ENST00000565038 TOMM7Q9P0U1 55 aa0.72□□□□□ -2.29
PALB2-203ENST00000565038 TRAV23DV6A0A075B6W5 121 aa0.71□□□□□ -2.3
PALB2-203ENST00000565038 IGIPA6NJ69 53 aa0.71□□□□□ -2.3
PALB2-203ENST00000565038 NUPR1O60356 82 aa0.71□□□□□ -2.3
PALB2-203ENST00000565038 SPINK8P0C7L1 97 aa0.71□□□□□ -2.3
PALB2-203ENST00000565038 COX7CP15954 63 aa0.71□□□□□ -2.3
PALB2-203ENST00000565038 FCER1GP30273 86 aa0.71□□□□□ -2.3
PALB2-203ENST00000565038 IFI27P40305 119 aaPredicted RBP0.71□□□□□ -2.3
PALB2-203ENST00000565038 UBE2D1P51668 147 aa0.71□□□□□ -2.3
PALB2-203ENST00000565038 ADIRFQ15847 76 aa0.71□□□□□ -2.3
PALB2-203ENST00000565038 KRTAP19-2Q3LHN2 52 aa0.71□□□□□ -2.3
PALB2-203ENST00000565038 TCTE3Q8IZS6 198 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms