RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 IGLV1-50A0A075B6I6 118 aa4.02□□□□□ -1.77
PTPN9-204ENST00000564970 DEFB131AP59861 70 aa4.02□□□□□ -1.77
PTPN9-204ENST00000564970 MIR22HGQ0VDD5 57 aa4.02□□□□□ -1.77
PTPN9-204ENST00000564970 Q6ZR54 194 aa4.02□□□□□ -1.77
PTPN9-204ENST00000564970 MEGF8Q7Z7M0 2845 aa4.02□□□□□ -1.77
PTPN9-204ENST00000564970 RYR3Q15413 4870 aa4.01□□□□□ -1.77
PTPN9-204ENST00000564970 IGLV8-61A0A075B6I0 122 aa4.01□□□□□ -1.77
PTPN9-204ENST00000564970 H3BUX3 64 aa4.01□□□□□ -1.77
PTPN9-204ENST00000564970 CDK2AP2O75956 126 aa4.01□□□□□ -1.77
PTPN9-204ENST00000564970 ACYP2P14621 99 aa4.01□□□□□ -1.77
PTPN9-204ENST00000564970 HTN1P15515 57 aa4.01□□□□□ -1.77
PTPN9-204ENST00000564970 EGFEM1PQ0D2K5 195 aa4.01□□□□□ -1.77
PTPN9-204ENST00000564970 KRTAP25-1Q3LHN0 102 aa4.01□□□□□ -1.77
PTPN9-204ENST00000564970 Q8N377 158 aa4.01□□□□□ -1.77
PTPN9-204ENST00000564970 SORL1Q92673 2214 aa4.01□□□□□ -1.77
PTPN9-204ENST00000564970 ZNF469Q96JG9 3925 aaPredicted RBP4.01□□□□□ -1.77
PTPN9-204ENST00000564970 IGKV3OR2-268A0A0C4DH90 116 aa4□□□□□ -1.77
PTPN9-204ENST00000564970 HRES1P13985 223 aa4□□□□□ -1.77
PTPN9-204ENST00000564970 ADM2Q7Z4H4 148 aa4□□□□□ -1.77
PTPN9-204ENST00000564970 DMAC1Q96GE9 116 aa4□□□□□ -1.77
PTPN9-204ENST00000564970 CUBNO60494 3623 aa4□□□□□ -1.77
PTPN9-204ENST00000564970 CR1P17927 2039 aa3.99□□□□□ -1.77
PTPN9-204ENST00000564970 A0A1B0GU69 56 aa3.99□□□□□ -1.77
PTPN9-204ENST00000564970 KRTAP16-1A8MUX0 517 aa3.99□□□□□ -1.77
PTPN9-204ENST00000564970 PRB2P02812 416 aaPredicted RBP3.99□□□□□ -1.77
PTPN9-204ENST00000564970 SEC61BP60468 96 aaKnown RBP3.99□□□□□ -1.77
PTPN9-204ENST00000564970 Q8NDZ9 215 aa3.99□□□□□ -1.77
PTPN9-204ENST00000564970 CSPG4Q6UVK1 2322 aa3.99□□□□□ -1.77
PTPN9-204ENST00000564970 KMT2CQ8NEZ4 4911 aaKnown RBP3.98□□□□□ -1.77
PTPN9-204ENST00000564970 TGP01266 2768 aa3.98□□□□□ -1.77
PTPN9-204ENST00000564970 IGLV10-54A0A075B6I4 117 aa3.98□□□□□ -1.77
PTPN9-204ENST00000564970 DNAJC9-AS1A6NH13 148 aa3.98□□□□□ -1.77
PTPN9-204ENST00000564970 WFDC13Q8IUB5 93 aa3.98□□□□□ -1.77
PTPN9-204ENST00000564970 PLA2G2DQ9UNK4 145 aa3.98□□□□□ -1.77
PTPN9-204ENST00000564970 A6NDX4 124 aa3.97□□□□□ -1.77
PTPN9-204ENST00000564970 LYNX1G3V0Z9 82 aa3.97□□□□□ -1.77
PTPN9-204ENST00000564970 WFDC10BQ8IUB3 73 aa3.97□□□□□ -1.77
PTPN9-204ENST00000564970 PRR34Q9NV39 138 aa3.97□□□□□ -1.77
PTPN9-204ENST00000564970 ACANP16112 2415 aa3.97□□□□□ -1.77
PTPN9-204ENST00000564970 MXRA5Q9NR99 2828 aa3.96□□□□□ -1.78
PTPN9-204ENST00000564970 NSD1Q96L73 2696 aaPredicted RBP3.96□□□□□ -1.78
PTPN9-204ENST00000564970 ZNF861PO60384 105 aa3.96□□□□□ -1.78
PTPN9-204ENST00000564970 ANGP03950 147 aaKnown RBP3.96□□□□□ -1.78
PTPN9-204ENST00000564970 Q6ZRX8 168 aa3.96□□□□□ -1.78
PTPN9-204ENST00000564970 C7orf33Q8WU49 177 aa3.96□□□□□ -1.78
PTPN9-204ENST00000564970 VPS13CQ709C8 3753 aa3.96□□□□□ -1.78
PTPN9-204ENST00000564970 ANK2Q01484 3957 aa3.96□□□□□ -1.78
PTPN9-204ENST00000564970 K7ERS5 55 aa3.95□□□□□ -1.78
PTPN9-204ENST00000564970 REG3AQ06141 175 aa3.95□□□□□ -1.78
PTPN9-204ENST00000564970 DEFB109BQ30KR1 87 aa3.95□□□□□ -1.78
PTPN9-204ENST00000564970 DCHS2Q6V1P9 2916 aa3.95□□□□□ -1.78
PTPN9-204ENST00000564970 RP1L1Q8IWN7 2480 aaPredicted RBP3.95□□□□□ -1.78
PTPN9-204ENST00000564970 IGKV2-24A0A0C4DH68 120 aa3.94□□□□□ -1.78
PTPN9-204ENST00000564970 INAFM1C9JVW0 142 aa3.94□□□□□ -1.78
PTPN9-204ENST00000564970 LINC00483Q53H64 154 aa3.94□□□□□ -1.78
PTPN9-204ENST00000564970 UNQ6190/PRO20217Q6UXQ8 127 aa3.94□□□□□ -1.78
PTPN9-204ENST00000564970 SPRR1AP35321 89 aa3.93□□□□□ -1.78
PTPN9-204ENST00000564970 KRTAP4-5Q9BYR2 181 aa3.93□□□□□ -1.78
PTPN9-204ENST00000564970 NOP10Q9NPE3 64 aaKnown RBP3.92□□□□□ -1.78
PTPN9-204ENST00000564970 C6orf48Q9UBA6 75 aa3.92□□□□□ -1.78
PTPN9-204ENST00000564970 TLN2Q9Y4G6 2542 aa3.92□□□□□ -1.78
PTPN9-204ENST00000564970 BIRC6Q9NR09 4857 aa3.92□□□□□ -1.78
PTPN9-204ENST00000564970 PRRC2CQ9Y520 2896 aaKnown RBP3.91□□□□□ -1.78
PTPN9-204ENST00000564970 NUPR2A6NF83 97 aa3.91□□□□□ -1.78
PTPN9-204ENST00000564970 LYNX1P0DP58 116 aa3.91□□□□□ -1.78
PTPN9-204ENST00000564970 KRTAP4-11Q9BYQ6 195 aa3.91□□□□□ -1.78
PTPN9-204ENST00000564970 PRO0255Q9UI72 69 aa3.91□□□□□ -1.78
PTPN9-204ENST00000564970 MMP24-AS1A0A0U1RRL7 71 aa3.9□□□□□ -1.79
PTPN9-204ENST00000564970 CAMK2N2Q96S95 79 aa3.9□□□□□ -1.79
PTPN9-204ENST00000564970 MAP1AP78559 2803 aaPredicted RBP3.9□□□□□ -1.79
PTPN9-204ENST00000564970 KRTAP4-16G5E9R7 235 aaPredicted RBP3.89□□□□□ -1.79
PTPN9-204ENST00000564970 PCOTHQ58A44 107 aa3.89□□□□□ -1.79
PTPN9-204ENST00000564970 CSNK1G2-AS1Q8NCQ2 148 aa3.89□□□□□ -1.79
PTPN9-204ENST00000564970 DEFB105AQ8NG35 78 aa3.89□□□□□ -1.79
PTPN9-204ENST00000564970 LINC00472Q9H8W2 130 aa3.89□□□□□ -1.79
PTPN9-204ENST00000564970 EPPK1P58107 5090 aaKnown RBP3.88□□□□□ -1.79
PTPN9-204ENST00000564970 WNK1Q9H4A3 2382 aa3.88□□□□□ -1.79
PTPN9-204ENST00000564970 IGLV7-43P04211 117 aa3.88□□□□□ -1.79
PTPN9-204ENST00000564970 TLX1NBP0CAT3 122 aa3.88□□□□□ -1.79
PTPN9-204ENST00000564970 CLPSL2Q6UWE3 100 aa3.88□□□□□ -1.79
PTPN9-204ENST00000564970 IGLV5-52A0A0A0MRZ9 124 aa3.87□□□□□ -1.79
PTPN9-204ENST00000564970 LELP1Q5T871 98 aa3.87□□□□□ -1.79
PTPN9-204ENST00000564970 IGFL1Q6UW32 110 aa3.87□□□□□ -1.79
PTPN9-204ENST00000564970 C20orf166-AS1Q96NR2 134 aa3.87□□□□□ -1.79
PTPN9-204ENST00000564970 ANAPC11Q9NYG5 84 aa3.87□□□□□ -1.79
PTPN9-204ENST00000564970 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.87□□□□□ -1.79
PTPN9-204ENST00000564970 PCLOQ9Y6V0 5065 aa3.87□□□□□ -1.79
PTPN9-204ENST00000564970 RPL37AP61513 92 aaKnown RBP3.86□□□□□ -1.79
PTPN9-204ENST00000564970 PKDREJQ9NTG1 2253 aa3.86□□□□□ -1.79
PTPN9-204ENST00000564970 A0A1W2PNU3 283 aaPredicted RBP3.85□□□□□ -1.79
PTPN9-204ENST00000564970 A8MUU9 505 aa3.85□□□□□ -1.79
PTPN9-204ENST00000564970 CHTF8P0CG12 524 aa3.85□□□□□ -1.79
PTPN9-204ENST00000564970 SPRR1BP22528 89 aa3.85□□□□□ -1.79
PTPN9-204ENST00000564970 DEFB116Q30KQ4 102 aa3.85□□□□□ -1.79
PTPN9-204ENST00000564970 KRTAP26-1Q6PEX3 210 aa3.85□□□□□ -1.79
PTPN9-204ENST00000564970 C4orf3Q8WVX3 66 aa3.85□□□□□ -1.79
PTPN9-204ENST00000564970 P0C880 135 aa3.84□□□□□ -1.79
PTPN9-204ENST00000564970 Q5W150 140 aa3.84□□□□□ -1.79
PTPN9-204ENST00000564970 HYDINQ4G0P3 5121 aa3.82□□□□□ -1.8
PTPN9-204ENST00000564970 IGLV9-49A0A0B4J1Y8 123 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 168.8 ms