RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 KCNQ1DNQ9H478 68 aa10.43□□□□□ -0.74
LINC00554-201ENST00000564841 K7EIL1 84 aa10.42□□□□□ -0.74
LINC00554-201ENST00000564841 TNP2Q05952 138 aa10.42□□□□□ -0.74
LINC00554-201ENST00000564841 B9D2Q9BPU9 175 aa10.41□□□□□ -0.74
LINC00554-201ENST00000564841 PRR15LQ9BU68 103 aa10.41□□□□□ -0.74
LINC00554-201ENST00000564841 Q6ZRX8 168 aa10.39□□□□□ -0.75
LINC00554-201ENST00000564841 CD164Q04900 197 aa10.39□□□□□ -0.75
LINC00554-201ENST00000564841 Q8N9P0 234 aaPredicted RBP10.39□□□□□ -0.75
LINC00554-201ENST00000564841 UBE2BP63146 152 aa10.37□□□□□ -0.75
LINC00554-201ENST00000564841 CASC10Q5T4H9 136 aa10.37□□□□□ -0.75
LINC00554-201ENST00000564841 LCA10Q71F78 164 aa10.37□□□□□ -0.75
LINC00554-201ENST00000564841 SPRR4Q96PI1 79 aa10.37□□□□□ -0.75
LINC00554-201ENST00000564841 LINC00588Q9Y4M8 146 aa10.36□□□□□ -0.75
LINC00554-201ENST00000564841 RBM12B-AS1Q9P1G2 102 aa10.35□□□□□ -0.75
LINC00554-201ENST00000564841 LYSTQ99698 3801 aa10.34□□□□□ -0.75
LINC00554-201ENST00000564841 MP68P56378 58 aa10.34□□□□□ -0.75
LINC00554-201ENST00000564841 KRTAP4-16G5E9R7 235 aaPredicted RBP10.33□□□□□ -0.75
LINC00554-201ENST00000564841 LINC00476Q8WZB0 136 aa10.33□□□□□ -0.75
LINC00554-201ENST00000564841 DHRS4-AS1Q9P1J3 65 aa10.33□□□□□ -0.76
LINC00554-201ENST00000564841 A0A087WSZ3 146 aa10.32□□□□□ -0.76
LINC00554-201ENST00000564841 KRTAP7-1Q8IUC3 87 aa10.32□□□□□ -0.76
LINC00554-201ENST00000564841 MRPL55Q7Z7F7 128 aaKnown RBP10.31□□□□□ -0.76
LINC00554-201ENST00000564841 HUWE1Q7Z6Z7 4374 aaKnown RBP10.31□□□□□ -0.76
LINC00554-201ENST00000564841 DNAH3Q8TD57 4116 aa10.31□□□□□ -0.76
LINC00554-201ENST00000564841 NDUFB1O75438 58 aa10.3□□□□□ -0.76
LINC00554-201ENST00000564841 UBE2AP49459 152 aa10.3□□□□□ -0.76
LINC00554-201ENST00000564841 H0Y9P7 68 aa10.3□□□□□ -0.76
LINC00554-201ENST00000564841 A6NED7 52 aa10.29□□□□□ -0.76
LINC00554-201ENST00000564841 KTN1-AS1Q86SY8 53 aa10.29□□□□□ -0.76
LINC00554-201ENST00000564841 IGLV1-50A0A075B6I6 118 aa10.29□□□□□ -0.76
LINC00554-201ENST00000564841 IGFL1Q6UW32 110 aa10.29□□□□□ -0.76
LINC00554-201ENST00000564841 DNAH10Q8IVF4 4471 aa10.27□□□□□ -0.77
LINC00554-201ENST00000564841 A0A1B0GW54 56 aa10.25□□□□□ -0.77
LINC00554-201ENST00000564841 H3BNG1 76 aa10.25□□□□□ -0.77
LINC00554-201ENST00000564841 LIMD2Q9BT23 127 aa10.24□□□□□ -0.77
LINC00554-201ENST00000564841 TGP01266 2768 aa10.23□□□□□ -0.77
LINC00554-201ENST00000564841 SPRR1AP35321 89 aa10.23□□□□□ -0.77
LINC00554-201ENST00000564841 KRTAP29-1A8MX34 341 aaPredicted RBP10.22□□□□□ -0.77
LINC00554-201ENST00000564841 PRLHP81277 87 aa10.22□□□□□ -0.77
LINC00554-201ENST00000564841 CASC2Q6XLA1 102 aa10.22□□□□□ -0.77
LINC00554-201ENST00000564841 PCOTHQ58A44 107 aa10.21□□□□□ -0.77
LINC00554-201ENST00000564841 COA5Q86WW8 74 aa10.21□□□□□ -0.77
LINC00554-201ENST00000564841 LINC01556Q5JQF7 62 aa10.2□□□□□ -0.78
LINC00554-201ENST00000564841 A6NN06 94 aa10.19□□□□□ -0.78
LINC00554-201ENST00000564841 CNBPP62633 177 aaKnown RBP10.19□□□□□ -0.78
LINC00554-201ENST00000564841 SPAG11AQ6PDA7 123 aa10.19□□□□□ -0.78
LINC00554-201ENST00000564841 A0A096LNI7 61 aa10.18□□□□□ -0.78
LINC00554-201ENST00000564841 IGKV2-24A0A0C4DH68 120 aa10.18□□□□□ -0.78
LINC00554-201ENST00000564841 ATP11AUNQ6ZP68 121 aa10.17□□□□□ -0.78
LINC00554-201ENST00000564841 C9orf163Q8N9P6 203 aa10.17□□□□□ -0.78
LINC00554-201ENST00000564841 SPANXA2-OT1Q8N9U9 137 aa10.16□□□□□ -0.78
LINC00554-201ENST00000564841 Q75L30 129 aa10.16□□□□□ -0.78
LINC00554-201ENST00000564841 DNHD1Q96M86 4753 aa10.15□□□□□ -0.78
LINC00554-201ENST00000564841 UBE2DNLQ8IWF7 75 aa10.15□□□□□ -0.79
LINC00554-201ENST00000564841 MEGF8Q7Z7M0 2845 aa10.14□□□□□ -0.79
LINC00554-201ENST00000564841 DNAH9Q9NYC9 4486 aa10.14□□□□□ -0.79
LINC00554-201ENST00000564841 REG3GQ6UW15 175 aa10.14□□□□□ -0.79
LINC00554-201ENST00000564841 DNAH10OSP0CZ25 163 aa10.13□□□□□ -0.79
LINC00554-201ENST00000564841 MOBPQ13875 183 aa10.12□□□□□ -0.79
LINC00554-201ENST00000564841 SPINK7P58062 85 aa10.12□□□□□ -0.79
LINC00554-201ENST00000564841 LOC101927531A0A1B0GV80 90 aa10.11□□□□□ -0.79
LINC00554-201ENST00000564841 H0Y9J4 135 aa10.1□□□□□ -0.79
LINC00554-201ENST00000564841 CDC42SE1Q9NRR8 79 aa10.09□□□□□ -0.79
LINC00554-201ENST00000564841 PLA2G2DQ9UNK4 145 aa10.09□□□□□ -0.79
LINC00554-201ENST00000564841 TLX1NBP0CAT3 122 aa10.08□□□□□ -0.8
LINC00554-201ENST00000564841 PRKDCP78527 4128 aaKnown RBP10.08□□□□□ -0.8
LINC00554-201ENST00000564841 KRTAP1-5Q9BYS1 174 aa10.08□□□□□ -0.8
LINC00554-201ENST00000564841 PHF5AQ7RTV0 110 aaKnown RBP10.07□□□□□ -0.8
LINC00554-201ENST00000564841 DNAH7Q8WXX0 4024 aa10.07□□□□□ -0.8
LINC00554-201ENST00000564841 IGLV5-37A0A075B6J1 123 aa10.07□□□□□ -0.8
LINC00554-201ENST00000564841 IGLV7-46A0A075B6I9 117 aa10.05□□□□□ -0.8
LINC00554-201ENST00000564841 NDUFS5O43920 106 aa10.05□□□□□ -0.8
LINC00554-201ENST00000564841 A8MWP4 228 aa10.04□□□□□ -0.8
LINC00554-201ENST00000564841 CHTF8P0CG12 524 aa10.04□□□□□ -0.8
LINC00554-201ENST00000564841 PRAC1Q96KF2 57 aa10.04□□□□□ -0.8
LINC00554-201ENST00000564841 LINC00472Q9H8W2 130 aa10.03□□□□□ -0.8
LINC00554-201ENST00000564841 C7orf65Q6ZTY9 151 aa10.02□□□□□ -0.8
LINC00554-201ENST00000564841 KRTAP11-1Q8IUC1 163 aa10.02□□□□□ -0.8
LINC00554-201ENST00000564841 H3BPC8 53 aa10.02□□□□□ -0.81
LINC00554-201ENST00000564841 PLECQ15149 4684 aaKnown RBP10.01□□□□□ -0.81
LINC00554-201ENST00000564841 MMP24-AS1A0A0U1RRL7 71 aa10.01□□□□□ -0.81
LINC00554-201ENST00000564841 DNAH1Q9P2D7 4330 aa10.01□□□□□ -0.81
LINC00554-201ENST00000564841 ADM2Q7Z4H4 148 aa9.99□□□□□ -0.81
LINC00554-201ENST00000564841 APLNQ9ULZ1 77 aa9.99□□□□□ -0.81
LINC00554-201ENST00000564841 LINC01558Q9Y6Z2 57 aa9.98□□□□□ -0.81
LINC00554-201ENST00000564841 IGLV8-61A0A075B6I0 122 aa9.97□□□□□ -0.81
LINC00554-201ENST00000564841 HRES1P13985 223 aa9.97□□□□□ -0.81
LINC00554-201ENST00000564841 PLAC8Q9NZF1 115 aa9.95□□□□□ -0.82
LINC00554-201ENST00000564841 FBN3Q75N90 2809 aa9.95□□□□□ -0.82
LINC00554-201ENST00000564841 PRR26Q8N8Z3 221 aa9.95□□□□□ -0.82
LINC00554-201ENST00000564841 STARD9Q9P2P6 4700 aa9.93□□□□□ -0.82
LINC00554-201ENST00000564841 LINC00313P59037 77 aa9.92□□□□□ -0.82
LINC00554-201ENST00000564841 C8orf87E5RJ46 101 aa9.91□□□□□ -0.82
LINC00554-201ENST00000564841 IGHV6-1A0A0B4J1U7 121 aa9.86□□□□□ -0.83
LINC00554-201ENST00000564841 NUPR2A6NF83 97 aa9.86□□□□□ -0.83
LINC00554-201ENST00000564841 A0A087X002 238 aa9.85□□□□□ -0.83
LINC00554-201ENST00000564841 NOTCH2NLQ7Z3S9 236 aa9.85□□□□□ -0.83
LINC00554-201ENST00000564841 IGLV9-49A0A0B4J1Y8 123 aa9.85□□□□□ -0.83
LINC00554-201ENST00000564841 NBDYA0A0U1RRE5 68 aa9.85□□□□□ -0.83
LINC00554-201ENST00000564841 PANO1I0J062 215 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms