RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 KTN1-AS1Q86SY8 53 aa7.15□□□□□ -1.27
TCF4-222ENST00000564228 LIMD2Q9BT23 127 aa7.15□□□□□ -1.27
TCF4-222ENST00000564228 KCNQ1DNQ9H478 68 aa7.15□□□□□ -1.27
TCF4-222ENST00000564228 SPANXA2-OT1Q8N9U9 137 aa7.14□□□□□ -1.27
TCF4-222ENST00000564228 CAMK2N2Q96S95 79 aa7.14□□□□□ -1.27
TCF4-222ENST00000564228 HCG22E2RYF7 251 aa7.13□□□□□ -1.27
TCF4-222ENST00000564228 MRPL55Q7Z7F7 128 aaKnown RBP7.13□□□□□ -1.27
TCF4-222ENST00000564228 DHRS4-AS1Q9P1J3 65 aa7.13□□□□□ -1.27
TCF4-222ENST00000564228 LINC00588Q9Y4M8 146 aa7.13□□□□□ -1.27
TCF4-222ENST00000564228 TENM2Q9NT68 2774 aa7.13□□□□□ -1.27
TCF4-222ENST00000564228 C1orf137Q5JT78 98 aa7.13□□□□□ -1.27
TCF4-222ENST00000564228 ST20-AS1Q8NBB2 130 aa7.13□□□□□ -1.27
TCF4-222ENST00000564228 Q9BRP9 147 aa7.12□□□□□ -1.27
TCF4-222ENST00000564228 APLNQ9ULZ1 77 aa7.12□□□□□ -1.27
TCF4-222ENST00000564228 DNAH7Q8WXX0 4024 aa7.12□□□□□ -1.27
TCF4-222ENST00000564228 K7EQZ3 153 aa7.11□□□□□ -1.27
TCF4-222ENST00000564228 MP68P56378 58 aa7.11□□□□□ -1.27
TCF4-222ENST00000564228 H3BPC8 53 aa7.11□□□□□ -1.27
TCF4-222ENST00000564228 DEFB105AQ8NG35 78 aa7.1□□□□□ -1.27
TCF4-222ENST00000564228 NDUFS5O43920 106 aa7.09□□□□□ -1.27
TCF4-222ENST00000564228 UBE2DNLQ8IWF7 75 aa7.09□□□□□ -1.27
TCF4-222ENST00000564228 Q8N9P0 234 aaPredicted RBP7.09□□□□□ -1.27
TCF4-222ENST00000564228 ATP11AUNQ6ZP68 121 aa7.09□□□□□ -1.27
TCF4-222ENST00000564228 C16orf90A8MZG2 172 aa7.08□□□□□ -1.28
TCF4-222ENST00000564228 PRR4Q16378 134 aa7.08□□□□□ -1.28
TCF4-222ENST00000564228 LINC01556Q5JQF7 62 aa7.08□□□□□ -1.28
TCF4-222ENST00000564228 Q6ZRX8 168 aa7.08□□□□□ -1.28
TCF4-222ENST00000564228 LINC00208Q96KT6 92 aa7.08□□□□□ -1.28
TCF4-222ENST00000564228 LYSTQ99698 3801 aa7.08□□□□□ -1.28
TCF4-222ENST00000564228 DYNC2H1Q8NCM8 4307 aaKnown RBP7.08□□□□□ -1.28
TCF4-222ENST00000564228 CHKB-CPT1BH3BT56 60 aa7.07□□□□□ -1.28
TCF4-222ENST00000564228 Q75L30 129 aa7.07□□□□□ -1.28
TCF4-222ENST00000564228 NKAPP1Q8N9T2 125 aa7.07□□□□□ -1.28
TCF4-222ENST00000564228 WWC2-AS2Q96NR7 200 aa7.07□□□□□ -1.28
TCF4-222ENST00000564228 STARD9Q9P2P6 4700 aa7.07□□□□□ -1.28
TCF4-222ENST00000564228 DNAH10OSP0CZ25 163 aa7.07□□□□□ -1.28
TCF4-222ENST00000564228 KRTAP26-1Q6PEX3 210 aa7.07□□□□□ -1.28
TCF4-222ENST00000564228 C15orf56Q8N910 161 aa7.06□□□□□ -1.28
TCF4-222ENST00000564228 RBM12B-AS1Q9P1G2 102 aa7.06□□□□□ -1.28
TCF4-222ENST00000564228 LOC101927531A0A1B0GV80 90 aa7.05□□□□□ -1.28
TCF4-222ENST00000564228 KRTAP4-16G5E9R7 235 aaPredicted RBP7.05□□□□□ -1.28
TCF4-222ENST00000564228 PHF5AQ7RTV0 110 aaKnown RBP7.05□□□□□ -1.28
TCF4-222ENST00000564228 C7orf33Q8WU49 177 aa7.05□□□□□ -1.28
TCF4-222ENST00000564228 A8MU10 97 aa7.05□□□□□ -1.28
TCF4-222ENST00000564228 PLECQ15149 4684 aaKnown RBP7.04□□□□□ -1.28
TCF4-222ENST00000564228 LCE2BO14633 110 aa7.04□□□□□ -1.28
TCF4-222ENST00000564228 SPRR1AP35321 89 aa7.04□□□□□ -1.28
TCF4-222ENST00000564228 PRR15LQ9BU68 103 aa7.04□□□□□ -1.28
TCF4-222ENST00000564228 IGLV5-37A0A075B6J1 123 aa7.03□□□□□ -1.28
TCF4-222ENST00000564228 A6NN06 94 aa7.03□□□□□ -1.28
TCF4-222ENST00000564228 IGKV2D-24A0A075B6R9 120 aa7.01□□□□□ -1.29
TCF4-222ENST00000564228 KRTAP29-1A8MX34 341 aaPredicted RBP7.01□□□□□ -1.29
TCF4-222ENST00000564228 CASC10Q5T4H9 136 aa7.01□□□□□ -1.29
TCF4-222ENST00000564228 SERTAD4-AS1Q5TG53 156 aa7.01□□□□□ -1.29
TCF4-222ENST00000564228 H0Y9P7 68 aa7□□□□□ -1.29
TCF4-222ENST00000564228 TLX1NBP0CAT3 122 aa7□□□□□ -1.29
TCF4-222ENST00000564228 LCA10Q71F78 164 aa7□□□□□ -1.29
TCF4-222ENST00000564228 CDC42SE1Q9NRR8 79 aa7□□□□□ -1.29
TCF4-222ENST00000564228 C9orf163Q8N9P6 203 aa6.99□□□□□ -1.29
TCF4-222ENST00000564228 KRTAP1-5Q9BYS1 174 aa6.99□□□□□ -1.29
TCF4-222ENST00000564228 IGLV1-50A0A075B6I6 118 aa6.99□□□□□ -1.29
TCF4-222ENST00000564228 LCE2CQ5TA81 110 aa6.98□□□□□ -1.29
TCF4-222ENST00000564228 WFDC13Q8IUB5 93 aa6.98□□□□□ -1.29
TCF4-222ENST00000564228 SPTSSBQ8NFR3 76 aa6.98□□□□□ -1.29
TCF4-222ENST00000564228 A6NED7 52 aa6.97□□□□□ -1.29
TCF4-222ENST00000564228 LINC00476Q8WZB0 136 aa6.97□□□□□ -1.29
TCF4-222ENST00000564228 LY6G6CO95867 125 aa6.97□□□□□ -1.29
TCF4-222ENST00000564228 C7orf65Q6ZTY9 151 aa6.97□□□□□ -1.29
TCF4-222ENST00000564228 DNAH1Q9P2D7 4330 aa6.97□□□□□ -1.29
TCF4-222ENST00000564228 IGLV8-61A0A075B6I0 122 aa6.96□□□□□ -1.3
TCF4-222ENST00000564228 NBDYA0A0U1RRE5 68 aa6.96□□□□□ -1.3
TCF4-222ENST00000564228 COA5Q86WW8 74 aa6.95□□□□□ -1.3
TCF4-222ENST00000564228 VPS13DQ5THJ4 4388 aa6.95□□□□□ -1.3
TCF4-222ENST00000564228 IGLV7-46A0A075B6I9 117 aa6.94□□□□□ -1.3
TCF4-222ENST00000564228 IGFL1Q6UW32 110 aa6.94□□□□□ -1.3
TCF4-222ENST00000564228 CASC2Q6XLA1 102 aa6.94□□□□□ -1.3
TCF4-222ENST00000564228 PLAC8Q9NZF1 115 aa6.94□□□□□ -1.3
TCF4-222ENST00000564228 LINC01558Q9Y6Z2 57 aa6.93□□□□□ -1.3
TCF4-222ENST00000564228 RPL37AP8A6NKH3 93 aa6.92□□□□□ -1.3
TCF4-222ENST00000564228 LCE2AQ5TA79 106 aaPredicted RBP6.91□□□□□ -1.3
TCF4-222ENST00000564228 DEFB116Q30KQ4 102 aa6.91□□□□□ -1.3
TCF4-222ENST00000564228 CNBPP62633 177 aaKnown RBP6.9□□□□□ -1.3
TCF4-222ENST00000564228 KMT2AQ03164 3969 aa6.9□□□□□ -1.31
TCF4-222ENST00000564228 A0A087WSZ3 146 aa6.89□□□□□ -1.31
TCF4-222ENST00000564228 DNAH10Q8IVF4 4471 aa6.89□□□□□ -1.31
TCF4-222ENST00000564228 A8MWP4 228 aa6.89□□□□□ -1.31
TCF4-222ENST00000564228 MOBPQ13875 183 aa6.89□□□□□ -1.31
TCF4-222ENST00000564228 REG3GQ6UW15 175 aa6.88□□□□□ -1.31
TCF4-222ENST00000564228 Q6ZR54 194 aa6.88□□□□□ -1.31
TCF4-222ENST00000564228 ALMS1Q8TCU4 4167 aa6.87□□□□□ -1.31
TCF4-222ENST00000564228 PLA2G1BP04054 148 aaKnown RBP6.87□□□□□ -1.31
TCF4-222ENST00000564228 FAM168BA1KXE4 195 aa6.86□□□□□ -1.31
TCF4-222ENST00000564228 RPL37AP61513 92 aaKnown RBP6.86□□□□□ -1.31
TCF4-222ENST00000564228 Q6ZRN7 208 aaPredicted RBP6.86□□□□□ -1.31
TCF4-222ENST00000564228 KRTAP7-1Q8IUC3 87 aa6.86□□□□□ -1.31
TCF4-222ENST00000564228 C1orf134Q5TEV5 83 aa6.84□□□□□ -1.31
TCF4-222ENST00000564228 LINC00472Q9H8W2 130 aa6.84□□□□□ -1.31
TCF4-222ENST00000564228 TP53AIP1Q9HCN2 124 aa6.83□□□□□ -1.32
TCF4-222ENST00000564228 A0A0G2JQZ4 141 aa6.82□□□□□ -1.32
TCF4-222ENST00000564228 MMP24-AS1A0A0U1RRL7 71 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms