RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 REG3GQ6UW15 175 aa7.6□□□□□ -1.19
ABCA3-203ENST00000563623 A0A087WSZ3 146 aa7.6□□□□□ -1.19
ABCA3-203ENST00000563623 LINC00476Q8WZB0 136 aa7.6□□□□□ -1.19
ABCA3-203ENST00000563623 LINC00588Q9Y4M8 146 aa7.6□□□□□ -1.19
ABCA3-203ENST00000563623 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.59□□□□□ -1.19
ABCA3-203ENST00000563623 DNAH10OSP0CZ25 163 aa7.58□□□□□ -1.2
ABCA3-203ENST00000563623 Q1T7F1 81 aa7.58□□□□□ -1.2
ABCA3-203ENST00000563623 DSCR10P59022 87 aa7.57□□□□□ -1.2
ABCA3-203ENST00000563623 RPL37AP61513 92 aaKnown RBP7.57□□□□□ -1.2
ABCA3-203ENST00000563623 NDUFS5O43920 106 aa7.57□□□□□ -1.2
ABCA3-203ENST00000563623 FBN1P35555 2871 aaKnown RBP7.56□□□□□ -1.2
ABCA3-203ENST00000563623 MP68P56378 58 aa7.55□□□□□ -1.2
ABCA3-203ENST00000563623 LINC00208Q96KT6 92 aa7.55□□□□□ -1.2
ABCA3-203ENST00000563623 TLX1NBP0CAT3 122 aa7.54□□□□□ -1.2
ABCA3-203ENST00000563623 IGFL1Q6UW32 110 aa7.53□□□□□ -1.2
ABCA3-203ENST00000563623 MDFIQ99750 246 aa7.53□□□□□ -1.2
ABCA3-203ENST00000563623 UBE2DNLQ8IWF7 75 aa7.53□□□□□ -1.2
ABCA3-203ENST00000563623 KRTAP7-1Q8IUC3 87 aa7.53□□□□□ -1.2
ABCA3-203ENST00000563623 KRTAP4-16G5E9R7 235 aaPredicted RBP7.52□□□□□ -1.21
ABCA3-203ENST00000563623 C16orf90A8MZG2 172 aa7.52□□□□□ -1.21
ABCA3-203ENST00000563623 TNP2Q05952 138 aa7.52□□□□□ -1.21
ABCA3-203ENST00000563623 PLA2G2DQ9UNK4 145 aa7.52□□□□□ -1.21
ABCA3-203ENST00000563623 SPRR1AP35321 89 aa7.51□□□□□ -1.21
ABCA3-203ENST00000563623 A0A1B0GW54 56 aa7.51□□□□□ -1.21
ABCA3-203ENST00000563623 SPRR4Q96PI1 79 aa7.51□□□□□ -1.21
ABCA3-203ENST00000563623 H0Y9J4 135 aa7.5□□□□□ -1.21
ABCA3-203ENST00000563623 CHTF8P0CG12 524 aa7.5□□□□□ -1.21
ABCA3-203ENST00000563623 C8orf87E5RJ46 101 aa7.48□□□□□ -1.21
ABCA3-203ENST00000563623 KRTAP24-1Q3LI83 254 aa7.48□□□□□ -1.21
ABCA3-203ENST00000563623 IGLV5-37A0A075B6J1 123 aa7.48□□□□□ -1.21
ABCA3-203ENST00000563623 Q5VV11 94 aa7.48□□□□□ -1.21
ABCA3-203ENST00000563623 ATP11AUNQ6ZP68 121 aa7.47□□□□□ -1.21
ABCA3-203ENST00000563623 PHF5AQ7RTV0 110 aaKnown RBP7.47□□□□□ -1.21
ABCA3-203ENST00000563623 KMT2BQ9UMN6 2715 aaPredicted RBP7.47□□□□□ -1.21
ABCA3-203ENST00000563623 CASC2Q6XLA1 102 aa7.47□□□□□ -1.21
ABCA3-203ENST00000563623 B9D2Q9BPU9 175 aa7.47□□□□□ -1.21
ABCA3-203ENST00000563623 LIMD2Q9BT23 127 aa7.46□□□□□ -1.22
ABCA3-203ENST00000563623 H0Y9P7 68 aa7.46□□□□□ -1.22
ABCA3-203ENST00000563623 C7orf65Q6ZTY9 151 aa7.46□□□□□ -1.22
ABCA3-203ENST00000563623 NDUFB1O75438 58 aa7.44□□□□□ -1.22
ABCA3-203ENST00000563623 LCA10Q71F78 164 aa7.44□□□□□ -1.22
ABCA3-203ENST00000563623 STAB2Q8WWQ8 2551 aa7.42□□□□□ -1.22
ABCA3-203ENST00000563623 PRAC1Q96KF2 57 aa7.42□□□□□ -1.22
ABCA3-203ENST00000563623 IGLV9-49A0A0B4J1Y8 123 aa7.41□□□□□ -1.22
ABCA3-203ENST00000563623 SRRM2Q9UQ35 2752 aaKnown RBP7.41□□□□□ -1.22
ABCA3-203ENST00000563623 ZCCHC13Q8WW36 166 aaKnown RBP7.41□□□□□ -1.22
ABCA3-203ENST00000563623 PCOTHQ58A44 107 aa7.39□□□□□ -1.23
ABCA3-203ENST00000563623 KRTAP1-5Q9BYS1 174 aa7.39□□□□□ -1.23
ABCA3-203ENST00000563623 LCE6AA0A183 80 aa7.38□□□□□ -1.23
ABCA3-203ENST00000563623 SPAG11AQ6PDA7 123 aa7.38□□□□□ -1.23
ABCA3-203ENST00000563623 Q8N9P0 234 aaPredicted RBP7.37□□□□□ -1.23
ABCA3-203ENST00000563623 KRTAP11-1Q8IUC1 163 aa7.37□□□□□ -1.23
ABCA3-203ENST00000563623 K7EIL1 84 aa7.35□□□□□ -1.23
ABCA3-203ENST00000563623 CNBPP62633 177 aaKnown RBP7.35□□□□□ -1.23
ABCA3-203ENST00000563623 A8MWP4 228 aa7.34□□□□□ -1.23
ABCA3-203ENST00000563623 CYP4F30PQ9H0H9 118 aa7.34□□□□□ -1.23
ABCA3-203ENST00000563623 CDK2AP2O75956 126 aa7.33□□□□□ -1.24
ABCA3-203ENST00000563623 C14orf177Q52M58 125 aa7.33□□□□□ -1.24
ABCA3-203ENST00000563623 A6NN06 94 aa7.33□□□□□ -1.24
ABCA3-203ENST00000563623 TENM2Q9NT68 2774 aa7.32□□□□□ -1.24
ABCA3-203ENST00000563623 LOC101927531A0A1B0GV80 90 aa7.31□□□□□ -1.24
ABCA3-203ENST00000563623 MOBPQ13875 183 aa7.31□□□□□ -1.24
ABCA3-203ENST00000563623 CDC42SE1Q9NRR8 79 aa7.31□□□□□ -1.24
ABCA3-203ENST00000563623 IGHV6-1A0A0B4J1U7 121 aa7.31□□□□□ -1.24
ABCA3-203ENST00000563623 IGLV8-61A0A075B6I0 122 aa7.3□□□□□ -1.24
ABCA3-203ENST00000563623 KRTAP29-1A8MX34 341 aaPredicted RBP7.3□□□□□ -1.24
ABCA3-203ENST00000563623 LINC00313P59037 77 aa7.29□□□□□ -1.24
ABCA3-203ENST00000563623 LINC00472Q9H8W2 130 aa7.28□□□□□ -1.24
ABCA3-203ENST00000563623 LINC01554Q52M75 96 aa7.28□□□□□ -1.24
ABCA3-203ENST00000563623 SPINK6Q6UWN8 80 aa7.28□□□□□ -1.24
ABCA3-203ENST00000563623 COA5Q86WW8 74 aa7.28□□□□□ -1.24
ABCA3-203ENST00000563623 ANAPC11Q9NYG5 84 aa7.27□□□□□ -1.25
ABCA3-203ENST00000563623 H3BPC8 53 aa7.26□□□□□ -1.25
ABCA3-203ENST00000563623 PANO1I0J062 215 aa7.26□□□□□ -1.25
ABCA3-203ENST00000563623 Q75L30 129 aa7.26□□□□□ -1.25
ABCA3-203ENST00000563623 C9orf163Q8N9P6 203 aa7.26□□□□□ -1.25
ABCA3-203ENST00000563623 PRR26Q8N8Z3 221 aa7.25□□□□□ -1.25
ABCA3-203ENST00000563623 MMP24-AS1A0A0U1RRL7 71 aa7.25□□□□□ -1.25
ABCA3-203ENST00000563623 ADM2Q7Z4H4 148 aa7.24□□□□□ -1.25
ABCA3-203ENST00000563623 SPANXA2-OT1Q8N9U9 137 aa7.23□□□□□ -1.25
ABCA3-203ENST00000563623 SPINK7P58062 85 aa7.23□□□□□ -1.25
ABCA3-203ENST00000563623 CSMD3Q7Z407 3707 aa7.22□□□□□ -1.25
ABCA3-203ENST00000563623 SPRR1BP22528 89 aa7.22□□□□□ -1.25
ABCA3-203ENST00000563623 RETNLBQ9BQ08 111 aa7.21□□□□□ -1.25
ABCA3-203ENST00000563623 APLNQ9ULZ1 77 aa7.21□□□□□ -1.26
ABCA3-203ENST00000563623 C8orf17Q9NRJ1 99 aa7.21□□□□□ -1.26
ABCA3-203ENST00000563623 COL7A1Q02388 2944 aa7.21□□□□□ -1.26
ABCA3-203ENST00000563623 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.2□□□□□ -1.26
ABCA3-203ENST00000563623 ZNF706Q9Y5V0 76 aaPredicted RBP7.2□□□□□ -1.26
ABCA3-203ENST00000563623 NBDYA0A0U1RRE5 68 aa7.2□□□□□ -1.26
ABCA3-203ENST00000563623 TP53AIP1Q9HCN2 124 aa7.17□□□□□ -1.26
ABCA3-203ENST00000563623 IGLV7-46A0A075B6I9 117 aa7.16□□□□□ -1.26
ABCA3-203ENST00000563623 CIRBP-AS1Q8TBR5 109 aa7.15□□□□□ -1.26
ABCA3-203ENST00000563623 ANK2Q01484 3957 aa7.15□□□□□ -1.27
ABCA3-203ENST00000563623 A0A1B0GVX0 72 aa7.15□□□□□ -1.27
ABCA3-203ENST00000563623 MRPL34Q9BQ48 92 aaKnown RBP7.14□□□□□ -1.27
ABCA3-203ENST00000563623 PSORS1C2Q9UIG4 136 aa7.13□□□□□ -1.27
ABCA3-203ENST00000563623 A0A087X002 238 aa7.13□□□□□ -1.27
ABCA3-203ENST00000563623 NOTCH2NLQ7Z3S9 236 aa7.13□□□□□ -1.27
ABCA3-203ENST00000563623 TGP01266 2768 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms