RNA–Protein interactions for RNA: ENST00000562710.1

LINC00565-201, long intergenic non-protein coding RNA 565, humanhuman

BASIC

Gene LINC00565, Length 2,331 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00565-201ENST00000562710 DEFB116Q30KQ4 102 aa13.63□□□□□ -0.23
LINC00565-201ENST00000562710 A0A087WSZ3 146 aa13.63□□□□□ -0.23
LINC00565-201ENST00000562710 LYSTQ99698 3801 aa13.61□□□□□ -0.23
LINC00565-201ENST00000562710 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.6□□□□□ -0.23
LINC00565-201ENST00000562710 UBE2AP49459 152 aa13.59□□□□□ -0.23
LINC00565-201ENST00000562710 KRTAP11-1Q8IUC1 163 aa13.58□□□□□ -0.24
LINC00565-201ENST00000562710 PHF5AQ7RTV0 110 aaKnown RBP13.57□□□□□ -0.24
LINC00565-201ENST00000562710 MPLKIPQ8TAP9 179 aa13.56□□□□□ -0.24
LINC00565-201ENST00000562710 CHTF8P0CG12 524 aa13.56□□□□□ -0.24
LINC00565-201ENST00000562710 WFDC13Q8IUB5 93 aa13.55□□□□□ -0.24
LINC00565-201ENST00000562710 PRO0628Q9UI54 55 aa13.55□□□□□ -0.24
LINC00565-201ENST00000562710 UBE2DNLQ8IWF7 75 aa13.55□□□□□ -0.24
LINC00565-201ENST00000562710 C14orf177Q52M58 125 aa13.54□□□□□ -0.24
LINC00565-201ENST00000562710 DNAH9Q9NYC9 4486 aa13.54□□□□□ -0.24
LINC00565-201ENST00000562710 hDV103S1A0JD37 113 aa13.53□□□□□ -0.24
LINC00565-201ENST00000562710 H0Y9J4 135 aa13.53□□□□□ -0.24
LINC00565-201ENST00000562710 STAB2Q8WWQ8 2551 aa13.53□□□□□ -0.24
LINC00565-201ENST00000562710 SPRR1BP22528 89 aa13.52□□□□□ -0.24
LINC00565-201ENST00000562710 RPL37AP61513 92 aaKnown RBP13.52□□□□□ -0.24
LINC00565-201ENST00000562710 SRRM2Q9UQ35 2752 aaKnown RBP13.51□□□□□ -0.25
LINC00565-201ENST00000562710 APLNQ9ULZ1 77 aa13.5□□□□□ -0.25
LINC00565-201ENST00000562710 C1orf64Q8NEQ6 169 aa13.49□□□□□ -0.25
LINC00565-201ENST00000562710 COL7A1Q02388 2944 aa13.49□□□□□ -0.25
LINC00565-201ENST00000562710 KRTAP29-1A8MX34 341 aaPredicted RBP13.48□□□□□ -0.25
LINC00565-201ENST00000562710 MGAM2Q2M2H8 2515 aa13.47□□□□□ -0.25
LINC00565-201ENST00000562710 C9orf163Q8N9P6 203 aa13.46□□□□□ -0.26
LINC00565-201ENST00000562710 MP68P56378 58 aa13.45□□□□□ -0.26
LINC00565-201ENST00000562710 NDUFB1O75438 58 aa13.44□□□□□ -0.26
LINC00565-201ENST00000562710 PRR15Q8IV56 129 aa13.44□□□□□ -0.26
LINC00565-201ENST00000562710 CYP4F30PQ9H0H9 118 aa13.44□□□□□ -0.26
LINC00565-201ENST00000562710 LINC00472Q9H8W2 130 aa13.43□□□□□ -0.26
LINC00565-201ENST00000562710 CASC2Q6XLA1 102 aa13.42□□□□□ -0.26
LINC00565-201ENST00000562710 B9D2Q9BPU9 175 aa13.41□□□□□ -0.26
LINC00565-201ENST00000562710 LRCOL1A6NCL2 159 aa13.41□□□□□ -0.26
LINC00565-201ENST00000562710 A8MWP4 228 aa13.41□□□□□ -0.26
LINC00565-201ENST00000562710 TRAV22A0A0B4J277 110 aa13.4□□□□□ -0.26
LINC00565-201ENST00000562710 PRR4Q16378 134 aa13.4□□□□□ -0.26
LINC00565-201ENST00000562710 BRK1Q8WUW1 75 aa13.39□□□□□ -0.27
LINC00565-201ENST00000562710 LINC00208Q96KT6 92 aa13.39□□□□□ -0.27
LINC00565-201ENST00000562710 PKIGQ9Y2B9 76 aa13.38□□□□□ -0.27
LINC00565-201ENST00000562710 DNAH7Q8WXX0 4024 aa13.37□□□□□ -0.27
LINC00565-201ENST00000562710 TENM2Q9NT68 2774 aa13.37□□□□□ -0.27
LINC00565-201ENST00000562710 CSMD3Q7Z407 3707 aa13.36□□□□□ -0.27
LINC00565-201ENST00000562710 PANO1I0J062 215 aa13.35□□□□□ -0.27
LINC00565-201ENST00000562710 KRTAP13-1Q8IUC0 172 aa13.35□□□□□ -0.27
LINC00565-201ENST00000562710 H0Y9P7 68 aa13.34□□□□□ -0.27
LINC00565-201ENST00000562710 Q1T7F1 81 aa13.34□□□□□ -0.27
LINC00565-201ENST00000562710 DYNC2H1Q8NCM8 4307 aaKnown RBP13.34□□□□□ -0.27
LINC00565-201ENST00000562710 NBDYA0A0U1RRE5 68 aa13.33□□□□□ -0.28
LINC00565-201ENST00000562710 H3BPC8 53 aa13.32□□□□□ -0.28
LINC00565-201ENST00000562710 Q6ZRN7 208 aaPredicted RBP13.29□□□□□ -0.28
LINC00565-201ENST00000562710 MMP24-AS1A0A0U1RRL7 71 aa13.26□□□□□ -0.29
LINC00565-201ENST00000562710 SPANXA2-OT1Q8N9U9 137 aa13.26□□□□□ -0.29
LINC00565-201ENST00000562710 MDFIQ99750 246 aa13.24□□□□□ -0.29
LINC00565-201ENST00000562710 PLECQ15149 4684 aaKnown RBP13.24□□□□□ -0.29
LINC00565-201ENST00000562710 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.23□□□□□ -0.29
LINC00565-201ENST00000562710 IGLV9-49A0A0B4J1Y8 123 aa13.23□□□□□ -0.29
LINC00565-201ENST00000562710 SPACA4Q8TDM5 124 aa13.23□□□□□ -0.29
LINC00565-201ENST00000562710 Q96NJ1 140 aa13.21□□□□□ -0.3
LINC00565-201ENST00000562710 NUPR2A6NF83 97 aa13.18□□□□□ -0.3
LINC00565-201ENST00000562710 PSPHP1O15172 72 aa13.17□□□□□ -0.3
LINC00565-201ENST00000562710 LINC00483Q53H64 154 aa13.17□□□□□ -0.3
LINC00565-201ENST00000562710 ASB16-AS1Q495Z4 193 aa13.14□□□□□ -0.31
LINC00565-201ENST00000562710 V9GYY9 64 aa13.13□□□□□ -0.31
LINC00565-201ENST00000562710 MOBPQ13875 183 aa13.12□□□□□ -0.31
LINC00565-201ENST00000562710 A0A087WTM6 91 aa13.1□□□□□ -0.31
LINC00565-201ENST00000562710 TP53AIP1Q9HCN2 124 aa13.1□□□□□ -0.31
LINC00565-201ENST00000562710 C8orf17Q9NRJ1 99 aa13.09□□□□□ -0.31
LINC00565-201ENST00000562710 ZNF706Q9Y5V0 76 aaPredicted RBP13.09□□□□□ -0.31
LINC00565-201ENST00000562710 WWC2-AS2Q96NR7 200 aa13.08□□□□□ -0.31
LINC00565-201ENST00000562710 A8MUN3 132 aa13.07□□□□□ -0.32
LINC00565-201ENST00000562710 PSORS1C2Q9UIG4 136 aa13.07□□□□□ -0.32
LINC00565-201ENST00000562710 IGLV7-46A0A075B6I9 117 aa13.06□□□□□ -0.32
LINC00565-201ENST00000562710 IGLV5-52A0A0A0MRZ9 124 aa13.05□□□□□ -0.32
LINC00565-201ENST00000562710 HECTD4Q9Y4D8 3996 aa13.05□□□□□ -0.32
LINC00565-201ENST00000562710 A0A1B0GVX0 72 aa13.04□□□□□ -0.32
LINC00565-201ENST00000562710 IGHV6-1A0A0B4J1U7 121 aa13.03□□□□□ -0.32
LINC00565-201ENST00000562710 RTL8CO15255 209 aa13.03□□□□□ -0.32
LINC00565-201ENST00000562710 C1orf195Q5TG92 126 aa13.03□□□□□ -0.32
LINC00565-201ENST00000562710 Q8N9P0 234 aaPredicted RBP13.03□□□□□ -0.32
LINC00565-201ENST00000562710 VPS13DQ5THJ4 4388 aa13.02□□□□□ -0.32
LINC00565-201ENST00000562710 STARD9Q9P2P6 4700 aa13.02□□□□□ -0.33
LINC00565-201ENST00000562710 Q6ZR54 194 aa13.02□□□□□ -0.33
LINC00565-201ENST00000562710 ANAPC11Q9NYG5 84 aa13.01□□□□□ -0.33
LINC00565-201ENST00000562710 PCOTHQ58A44 107 aa13□□□□□ -0.33
LINC00565-201ENST00000562710 ZNF861PO60384 105 aa13□□□□□ -0.33
LINC00565-201ENST00000562710 Q5VV11 94 aa13□□□□□ -0.33
LINC00565-201ENST00000562710 CDK2AP2O75956 126 aa12.99□□□□□ -0.33
LINC00565-201ENST00000562710 COA5Q86WW8 74 aa12.99□□□□□ -0.33
LINC00565-201ENST00000562710 LIMD2Q9BT23 127 aa12.99□□□□□ -0.33
LINC00565-201ENST00000562710 PLAC8Q9NZF1 115 aa12.99□□□□□ -0.33
LINC00565-201ENST00000562710 NDUFS5O43920 106 aa12.98□□□□□ -0.33
LINC00565-201ENST00000562710 CD164Q04900 197 aa12.97□□□□□ -0.33
LINC00565-201ENST00000562710 FRAS1Q86XX4 4008 aa12.95□□□□□ -0.34
LINC00565-201ENST00000562710 MRPL34Q9BQ48 92 aaKnown RBP12.95□□□□□ -0.34
LINC00565-201ENST00000562710 DNAH8Q96JB1 4490 aa12.93□□□□□ -0.34
LINC00565-201ENST00000562710 A0A087X002 238 aa12.92□□□□□ -0.34
LINC00565-201ENST00000562710 NOTCH2NLQ7Z3S9 236 aa12.92□□□□□ -0.34
LINC00565-201ENST00000562710 PRKDCP78527 4128 aaKnown RBP12.9□□□□□ -0.34
LINC00565-201ENST00000562710 PRR15LQ9BU68 103 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms