RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 ZNF815PA8K554 130 aa9.06□□□□□ -0.96
KATNB1-202ENST00000562542 TRAV13-2A0A0B4J235 113 aa9.05□□□□□ -0.96
KATNB1-202ENST00000562542 S100A1P23297 94 aa9.02□□□□□ -0.97
KATNB1-202ENST00000562542 LINC00310P59036 64 aa9.02□□□□□ -0.97
KATNB1-202ENST00000562542 APOC3P02656 99 aa9.01□□□□□ -0.97
KATNB1-202ENST00000562542 OCIAD2Q56VL3 154 aa9.01□□□□□ -0.97
KATNB1-202ENST00000562542 TTTY13Q9BZ97 58 aa9□□□□□ -0.97
KATNB1-202ENST00000562542 HRES1P13985 223 aa8.99□□□□□ -0.97
KATNB1-202ENST00000562542 MPLKIPQ8TAP9 179 aa8.99□□□□□ -0.97
KATNB1-202ENST00000562542 SMIM11BQ8TCY0 68 aa8.99□□□□□ -0.97
KATNB1-202ENST00000562542 COPS9Q8WXC6 57 aa8.99□□□□□ -0.97
KATNB1-202ENST00000562542 KRTAP16-1A8MUX0 517 aa8.98□□□□□ -0.97
KATNB1-202ENST00000562542 SNAPINO95295 136 aa8.98□□□□□ -0.97
KATNB1-202ENST00000562542 DSCR10P59022 87 aa8.98□□□□□ -0.97
KATNB1-202ENST00000562542 Q6ZQY7 126 aa8.98□□□□□ -0.97
KATNB1-202ENST00000562542 YPEL4Q96NS1 127 aa8.98□□□□□ -0.97
KATNB1-202ENST00000562542 NDUFA5Q16718 116 aa8.97□□□□□ -0.97
KATNB1-202ENST00000562542 SS18L2Q9UHA2 77 aa8.97□□□□□ -0.97
KATNB1-202ENST00000562542 VAMP3Q15836 100 aa8.96□□□□□ -0.98
KATNB1-202ENST00000562542 SCGB1D4Q6XE38 83 aa8.96□□□□□ -0.98
KATNB1-202ENST00000562542 TRGC2P03986 189 aa8.95□□□□□ -0.98
KATNB1-202ENST00000562542 SVBPQ8N300 66 aa8.95□□□□□ -0.98
KATNB1-202ENST00000562542 KRTAP20-1Q3LI63 56 aa8.94□□□□□ -0.98
KATNB1-202ENST00000562542 LINC00575Q6W349 94 aa8.94□□□□□ -0.98
KATNB1-202ENST00000562542 hADV29S1A0JD25 119 aa8.93□□□□□ -0.98
KATNB1-202ENST00000562542 IFITM1P13164 125 aa8.93□□□□□ -0.98
KATNB1-202ENST00000562542 Q6ZVH6 145 aa8.93□□□□□ -0.98
KATNB1-202ENST00000562542 H3BUT2 72 aa8.92□□□□□ -0.98
KATNB1-202ENST00000562542 MTURNQ8N3F0 131 aa8.91□□□□□ -0.98
KATNB1-202ENST00000562542 SYS1-DBNDD2H3BUS1 97 aa8.9□□□□□ -0.98
KATNB1-202ENST00000562542 MUSTN1Q8IVN3 82 aa8.9□□□□□ -0.98
KATNB1-202ENST00000562542 SNHG12Q9BXW3 62 aa8.9□□□□□ -0.98
KATNB1-202ENST00000562542 Q8N9P0 234 aaPredicted RBP8.89□□□□□ -0.99
KATNB1-202ENST00000562542 ANKRD39Q53RE8 183 aa8.88□□□□□ -0.99
KATNB1-202ENST00000562542 NOTCH2NLQ7Z3S9 236 aa8.88□□□□□ -0.99
KATNB1-202ENST00000562542 SCGB1D1O95968 90 aa8.87□□□□□ -0.99
KATNB1-202ENST00000562542 A8MWP4 228 aa8.86□□□□□ -0.99
KATNB1-202ENST00000562542 SIGMAR1Q99720 223 aa8.86□□□□□ -0.99
KATNB1-202ENST00000562542 LINC00313P59037 77 aa8.85□□□□□ -0.99
KATNB1-202ENST00000562542 LINC01545Q5VT33 79 aa8.84□□□□□ -0.99
KATNB1-202ENST00000562542 A0A087WSZ3 146 aa8.83□□□□□ -1
KATNB1-202ENST00000562542 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.83□□□□□ -1
KATNB1-202ENST00000562542 PPDPFLQ8WWR9 84 aa8.83□□□□□ -1
KATNB1-202ENST00000562542 MUC12Q9UKN1 5478 aa8.83□□□□□ -1
KATNB1-202ENST00000562542 COLCA2A8K830 154 aa8.81□□□□□ -1
KATNB1-202ENST00000562542 TEN1Q86WV5 123 aa8.81□□□□□ -1
KATNB1-202ENST00000562542 PET117Q6UWS5 81 aa8.79□□□□□ -1
KATNB1-202ENST00000562542 LOC105371267A0A1B0GV96 52 aa8.74□□□□□ -1.01
KATNB1-202ENST00000562542 IGKV4-1P06312 121 aa8.72□□□□□ -1.01
KATNB1-202ENST00000562542 C12orf57Q99622 126 aa8.71□□□□□ -1.02
KATNB1-202ENST00000562542 BVES-AS1Q5T3Y7 98 aa8.69□□□□□ -1.02
KATNB1-202ENST00000562542 C3orf79P0CE67 100 aa8.68□□□□□ -1.02
KATNB1-202ENST00000562542 NDUFV3P56181 108 aaKnown RBP8.67□□□□□ -1.02
KATNB1-202ENST00000562542 SPINK7P58062 85 aa8.67□□□□□ -1.02
KATNB1-202ENST00000562542 KRTDAPP60985 99 aa8.66□□□□□ -1.02
KATNB1-202ENST00000562542 IGHV6-1A0A0B4J1U7 121 aa8.65□□□□□ -1.02
KATNB1-202ENST00000562542 A6NN06 94 aa8.64□□□□□ -1.03
KATNB1-202ENST00000562542 ATOH7Q8N100 152 aa8.64□□□□□ -1.03
KATNB1-202ENST00000562542 H3BMG7 143 aa8.63□□□□□ -1.03
KATNB1-202ENST00000562542 GHRHP01286 108 aa8.62□□□□□ -1.03
KATNB1-202ENST00000562542 DEFB116Q30KQ4 102 aa8.62□□□□□ -1.03
KATNB1-202ENST00000562542 SNCGO76070 127 aa8.61□□□□□ -1.03
KATNB1-202ENST00000562542 WFDC13Q8IUB5 93 aa8.61□□□□□ -1.03
KATNB1-202ENST00000562542 ZCCHC13Q8WW36 166 aaKnown RBP8.61□□□□□ -1.03
KATNB1-202ENST00000562542 TMA7Q9Y2S6 64 aaKnown RBP8.61□□□□□ -1.03
KATNB1-202ENST00000562542 A0A1W2PNM2 257 aa8.59□□□□□ -1.03
KATNB1-202ENST00000562542 HIST1H2BKO60814 126 aa8.57□□□□□ -1.04
KATNB1-202ENST00000562542 HIST1H2BJP06899 126 aa8.57□□□□□ -1.04
KATNB1-202ENST00000562542 HIST1H2BOP23527 126 aa8.57□□□□□ -1.04
KATNB1-202ENST00000562542 HIST1H2BBP33778 126 aa8.57□□□□□ -1.04
KATNB1-202ENST00000562542 HIST1H2BDP58876 126 aa8.57□□□□□ -1.04
KATNB1-202ENST00000562542 HIST1H2BCP62807 126 aa8.57□□□□□ -1.04
KATNB1-202ENST00000562542 HIST2H2BEQ16778 126 aa8.57□□□□□ -1.04
KATNB1-202ENST00000562542 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.57□□□□□ -1.04
KATNB1-202ENST00000562542 HIST1H2BHQ93079 126 aa8.57□□□□□ -1.04
KATNB1-202ENST00000562542 HIST1H2BNQ99877 126 aa8.57□□□□□ -1.04
KATNB1-202ENST00000562542 HIST1H2BMQ99879 126 aa8.57□□□□□ -1.04
KATNB1-202ENST00000562542 FABP2P12104 132 aa8.55□□□□□ -1.04
KATNB1-202ENST00000562542 C8orf87E5RJ46 101 aa8.52□□□□□ -1.05
KATNB1-202ENST00000562542 MDN1Q9NU22 5596 aa8.52□□□□□ -1.05
KATNB1-202ENST00000562542 KRTAP5-9P26371 169 aa8.51□□□□□ -1.05
KATNB1-202ENST00000562542 FAM218AQ96MZ4 157 aa8.51□□□□□ -1.05
KATNB1-202ENST00000562542 LINC00472Q9H8W2 130 aa8.51□□□□□ -1.05
KATNB1-202ENST00000562542 TRBV7-4A0A0J9YYF1 115 aa8.5□□□□□ -1.05
KATNB1-202ENST00000562542 KRTAP2-3P0C7H8 128 aa8.5□□□□□ -1.05
KATNB1-202ENST00000562542 KRTAP2-4Q9BYR9 128 aa8.5□□□□□ -1.05
KATNB1-202ENST00000562542 ANKRD29Q8N6D5 301 aa8.49□□□□□ -1.05
KATNB1-202ENST00000562542 KMT2DO14686 5537 aa8.49□□□□□ -1.05
KATNB1-202ENST00000562542 A0A1B0GV72 72 aa8.47□□□□□ -1.05
KATNB1-202ENST00000562542 A0A1B0GVX0 72 aa8.47□□□□□ -1.05
KATNB1-202ENST00000562542 RAB37Q96AX2 223 aa8.47□□□□□ -1.05
KATNB1-202ENST00000562542 H0YGX0 51 aa8.46□□□□□ -1.06
KATNB1-202ENST00000562542 SNRPEP62304 92 aaKnown RBP8.46□□□□□ -1.06
KATNB1-202ENST00000562542 LYRM7Q5U5X0 104 aa8.46□□□□□ -1.06
KATNB1-202ENST00000562542 S100A6P06703 90 aa8.45□□□□□ -1.06
KATNB1-202ENST00000562542 H1FX-AS1Q4G0G2 97 aa8.43□□□□□ -1.06
KATNB1-202ENST00000562542 HIST1H4GQ99525 98 aa8.43□□□□□ -1.06
KATNB1-202ENST00000562542 TRACP01848 142 aa8.42□□□□□ -1.06
KATNB1-202ENST00000562542 Q5VV11 94 aa8.4□□□□□ -1.06
KATNB1-202ENST00000562542 CCKP06307 115 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms